| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118579962
Identifier: 118579962
GI number: 118579962
Start: 1641754
End: 1642491
Strand: Reverse
Name: 118579962
Synonym: Ppro_1539
Alternate gene names: NA
Gene position: 1642491-1641754 (Counterclockwise)
Preceding gene: 118579963
Following gene: 118579961
Centisome position: 40.98
GC content: 63.69
Gene sequence:
>738_bases GTGCCCGATCCTGACCCGCTCAAGCACAAAAGAAATCGACGCAGCGATTACGGTTGCCAGTACCTGTCCGTGGACTCCCC GATCCACCGCATGGGGGTCGCCTGGAAGCTGCTGCTGGGTACCCTGCTGGGGGTGGCGGCCATCGCGGCCCAAAAACCCT GGTCCCTGGCACTGGTGCTGGCCCTGGACGGTGTCTACTACTTCAGCGCCCGCCTGACGCTGGCCGACCTGTGGCGGGAC ACCCGCTACCTGATGGTACAGGCACTGATCGTCGTGGGACTGTACACGGCGCGCTACGGCATACCCGAGGGGCTCTGGCC GGGGCTGCGCATTGCGCTGCAGATATTCCTGTTCTTCATCCCCGGCATCGTTTTCCTGCGCACCACCCTGGCTTCCCGCA TGATGCAGGAACTGAGCAGGGTCATCCCCTACCGGCTCTCCTTCCTGGTCTACACCAGCCTGCGCTTCGTACCGCTCTTC GCACGGGAGATCCATGAAATAAAAATGACTCAGCAACTGCGGGGCGCACGACTGGCGCCGCGTGACCTGCTCAACCCCGC CAATTGGCGGGACATGTTCCACTGCCTGATGATCCCGCTGCTGGTGCGCGCACTGAAGATCGCCGACGAAGCGGCACTGT CCGCCGAGGCGCGGGGATTCGGACGGAGAAATGAGCGCACCCATTTCAATCCGCTGAGCCTGGAGCCTGCCACGAGGGAA GGGGAGCAGAGGCGGTGA
Upstream 100 bases:
>100_bases CTGCGCGACAGCTATGCCACCACCGTCCTGATCGCGTCCCACGACCCCCTGCCCGATCCCTGTTGGGCCGACCGAACCAT CTCCCTGGAGACCTCCTCGC
Downstream 100 bases:
>100_bases TCCTGGGGGAGAAAGGCGTTAACAAGAAAAGGTTGCCCACTATTCTCCCTCCTTGTGAAGGGGAGGGAGCTACCCCACCG ACTGTGTGTTTGTAATGGTT
Product: cobalt transport protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MPDPDPLKHKRNRRSDYGCQYLSVDSPIHRMGVAWKLLLGTLLGVAAIAAQKPWSLALVLALDGVYYFSARLTLADLWRD TRYLMVQALIVVGLYTARYGIPEGLWPGLRIALQIFLFFIPGIVFLRTTLASRMMQELSRVIPYRLSFLVYTSLRFVPLF AREIHEIKMTQQLRGARLAPRDLLNPANWRDMFHCLMIPLLVRALKIADEAALSAEARGFGRRNERTHFNPLSLEPATRE GEQRR
Sequences:
>Translated_245_residues MPDPDPLKHKRNRRSDYGCQYLSVDSPIHRMGVAWKLLLGTLLGVAAIAAQKPWSLALVLALDGVYYFSARLTLADLWRD TRYLMVQALIVVGLYTARYGIPEGLWPGLRIALQIFLFFIPGIVFLRTTLASRMMQELSRVIPYRLSFLVYTSLRFVPLF AREIHEIKMTQQLRGARLAPRDLLNPANWRDMFHCLMIPLLVRALKIADEAALSAEARGFGRRNERTHFNPLSLEPATRE GEQRR >Mature_244_residues PDPDPLKHKRNRRSDYGCQYLSVDSPIHRMGVAWKLLLGTLLGVAAIAAQKPWSLALVLALDGVYYFSARLTLADLWRDT RYLMVQALIVVGLYTARYGIPEGLWPGLRIALQIFLFFIPGIVFLRTTLASRMMQELSRVIPYRLSFLVYTSLRFVPLFA REIHEIKMTQQLRGARLAPRDLLNPANWRDMFHCLMIPLLVRALKIADEAALSAEARGFGRRNERTHFNPLSLEPATREG EQRR
Specific function: Unknown
COG id: COG0619
COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28106; Mature: 27974
Theoretical pI: Translated: 10.67; Mature: 10.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDPDPLKHKRNRRSDYGCQYLSVDSPIHRMGVAWKLLLGTLLGVAAIAAQKPWSLALVL CCCCCCHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH ALDGVYYFSARLTLADLWRDTRYLMVQALIVVGLYTARYGIPEGLWPGLRIALQIFLFFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH PGIVFLRTTLASRMMQELSRVIPYRLSFLVYTSLRFVPLFAREIHEIKMTQQLRGARLAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH RDLLNPANWRDMFHCLMIPLLVRALKIADEAALSAEARGFGRRNERTHFNPLSLEPATRE HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC GEQRR CCCCC >Mature Secondary Structure PDPDPLKHKRNRRSDYGCQYLSVDSPIHRMGVAWKLLLGTLLGVAAIAAQKPWSLALVL CCCCCHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH ALDGVYYFSARLTLADLWRDTRYLMVQALIVVGLYTARYGIPEGLWPGLRIALQIFLFFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH PGIVFLRTTLASRMMQELSRVIPYRLSFLVYTSLRFVPLFAREIHEIKMTQQLRGARLAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH RDLLNPANWRDMFHCLMIPLLVRALKIADEAALSAEARGFGRRNERTHFNPLSLEPATRE HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC GEQRR CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA