| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118579955
Identifier: 118579955
GI number: 118579955
Start: 1635943
End: 1636683
Strand: Reverse
Name: 118579955
Synonym: Ppro_1532
Alternate gene names: NA
Gene position: 1636683-1635943 (Counterclockwise)
Preceding gene: 118579956
Following gene: 118579954
Centisome position: 40.84
GC content: 65.05
Gene sequence:
>741_bases ATGCGCATTCTCGTGAGCATCGACGACACCGACAACCTGGAAAGCAGGGGGACCGGCGAACTGGCCTCCCTGATTGCCGA CGATCTGGAAACCAACGGCTGGGGGACCAGCAGTTTCGTCAGCCGCCACCAGCTGCTGGTACACCCGGACATCCCCTACA CCTCCCACAACAGTGCCATGTGCTTCAGCGCCGAGATCGACGACAGCTCCCTGGACCGGGTCATCGGCCATGCGTCCGCA TTCCTCTCCCGGGAGAGCGCGCCAGACTCCGATCCCGGCCTGTGCGTGGCCGTACTGGACAGACTGAGTTCTCCCGACCG GCTGATTGCCTTCGGCAGGCAGGCCAAGCAGGCCGTGCTCTCCAAGGAGATGGCCTATGAAACGGCCCGATGCGAGGGAG TGCACCTGTCCGAGCACGGCGGCAGCGGTCAGGGGGTCATCGGAGCCCTGGCCGGCGCCGGCCTGCGGTTGAGCGGCAAC GACGGACGCATGAAAGGGGGGCTGAAGATCCCCGCCGACAACGGCGTCATCAGCGTGGCCGCTCTGATCAGCAGCTTCGC CGAGGTGGATGTGGTGCGCTCCGTCACGGGCGAGGCCGTGGGGAACAACGACCTGGTGAGAATCGACGAAAAGGCCAAGA CCGTGCTGCTGGACGGGCTCTCGGTGCTGCTGGTCACTCCTTCTCCCGACGGAACCGTCACCTGGCAGACGGTTCACCGC AAGCAGCTGAAGAGGTACTGA
Upstream 100 bases:
>100_bases CCCGCGCGGAGCCTGAAATAGTATTTGATTTTTCACGACGCTCAGGTCACTATTCCGCGGACATTTCATTACTCTCACAC CCCTGCGGAGACATTCACCC
Downstream 100 bases:
>100_bases TGGAGAAACGGCAGACTGACGTCCATGGTGACGGGGAGTTTCCCGGCGGCAAAGAGGACTGGGCCGGCGCGGCCGGCCAA GCGGCCCTCTGCCGGCACTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MRILVSIDDTDNLESRGTGELASLIADDLETNGWGTSSFVSRHQLLVHPDIPYTSHNSAMCFSAEIDDSSLDRVIGHASA FLSRESAPDSDPGLCVAVLDRLSSPDRLIAFGRQAKQAVLSKEMAYETARCEGVHLSEHGGSGQGVIGALAGAGLRLSGN DGRMKGGLKIPADNGVISVAALISSFAEVDVVRSVTGEAVGNNDLVRIDEKAKTVLLDGLSVLLVTPSPDGTVTWQTVHR KQLKRY
Sequences:
>Translated_246_residues MRILVSIDDTDNLESRGTGELASLIADDLETNGWGTSSFVSRHQLLVHPDIPYTSHNSAMCFSAEIDDSSLDRVIGHASA FLSRESAPDSDPGLCVAVLDRLSSPDRLIAFGRQAKQAVLSKEMAYETARCEGVHLSEHGGSGQGVIGALAGAGLRLSGN DGRMKGGLKIPADNGVISVAALISSFAEVDVVRSVTGEAVGNNDLVRIDEKAKTVLLDGLSVLLVTPSPDGTVTWQTVHR KQLKRY >Mature_246_residues MRILVSIDDTDNLESRGTGELASLIADDLETNGWGTSSFVSRHQLLVHPDIPYTSHNSAMCFSAEIDDSSLDRVIGHASA FLSRESAPDSDPGLCVAVLDRLSSPDRLIAFGRQAKQAVLSKEMAYETARCEGVHLSEHGGSGQGVIGALAGAGLRLSGN DGRMKGGLKIPADNGVISVAALISSFAEVDVVRSVTGEAVGNNDLVRIDEKAKTVLLDGLSVLLVTPSPDGTVTWQTVHR KQLKRY
Specific function: Unknown
COG id: COG1571
COG function: function code R; Predicted DNA-binding protein containing a Zn-ribbon domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26066; Mature: 26066
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILVSIDDTDNLESRGTGELASLIADDLETNGWGTSSFVSRHQLLVHPDIPYTSHNSAM CEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCEEEEECCCCCCCCCCEE CFSAEIDDSSLDRVIGHASAFLSRESAPDSDPGLCVAVLDRLSSPDRLIAFGRQAKQAVL EEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHH SKEMAYETARCEGVHLSEHGGSGQGVIGALAGAGLRLSGNDGRMKGGLKIPADNGVISVA HHHHHHHHHHCCCEEEECCCCCCCCHHHHHCCCCEEEECCCCCEECCEECCCCCCCHHHH ALISSFAEVDVVRSVTGEAVGNNDLVRIDEKAKTVLLDGLSVLLVTPSPDGTVTWQTVHR HHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHEEEECCCEEEEEECCCCCCEEHHHHHH KQLKRY HHHHCC >Mature Secondary Structure MRILVSIDDTDNLESRGTGELASLIADDLETNGWGTSSFVSRHQLLVHPDIPYTSHNSAM CEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCEEEEECCCCCCCCCCEE CFSAEIDDSSLDRVIGHASAFLSRESAPDSDPGLCVAVLDRLSSPDRLIAFGRQAKQAVL EEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHH SKEMAYETARCEGVHLSEHGGSGQGVIGALAGAGLRLSGNDGRMKGGLKIPADNGVISVA HHHHHHHHHHCCCEEEECCCCCCCCHHHHHCCCCEEEECCCCCEECCEECCCCCCCHHHH ALISSFAEVDVVRSVTGEAVGNNDLVRIDEKAKTVLLDGLSVLLVTPSPDGTVTWQTVHR HHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHEEEECCCEEEEEECCCCCCEEHHHHHH KQLKRY HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA