Definition Pelobacter propionicus DSM 2379 chromosome, complete genome.
Accession NC_008609
Length 4,008,000

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The map label for this gene is murI [H]

Identifier: 118579835

GI number: 118579835

Start: 1506730

End: 1507548

Strand: Direct

Name: murI [H]

Synonym: Ppro_1411

Alternate gene names: 118579835

Gene position: 1506730-1507548 (Clockwise)

Preceding gene: 118579834

Following gene: 118579836

Centisome position: 37.59

GC content: 64.84

Gene sequence:

>819_bases
GTGTCCTGGCGCTCCATTGGCATATTCGATTCAGGGGTCGGCGGCCTGACGGTCCTGCGTGAGATCATCAAGGCCATGCC
CCAGGAGGACACCATCTATTTCGGCGATACCGCCCGGGTGCCCTACGGCACCAAATCGCCGGAGACGGTGATCCGCTACG
CCCATGAAATCACTTCCTTCCTGGTCAGGCGCGACATAAAGCTGCTGGTTGTGGCCTGCAATACGGTGTCTGCGGTCGCC
CTGAACGGACTGAAGCGCCACTTCCCCATCCCGGTGGTGGGGGTGATCGAGCCGGGCGCCAAGCGGGCGGTTGAGGTGAG
CCGCAGCGGCCGCATCGGCGTCATCGGCACTGCCGGCACCATCAAGAGCAGCGCCTACAGCCGCGCCATCAAACGACTCA
ATGCCCAGGCCGAGGTGCTGACCCGCGCCTGTCCGCTCTTCGTGCCGCTGGCCGAGGAAGGGTGGATCGACAACCAGGTG
GCGCGCCTGACGGCCCAGAGCTACCTCCAGGATCTCAAGGAGGCCGGCGTGGACACCCTGGTGCTCGGCTGCACCCACTA
CCCGCTGCTGAAGCCGCTTATCTGCGAGACCATGGGGCCCGATGTCACCCTGGTGGATTCGGCCGAAGAGACCGCCCGCA
GCGTGGCCGAGATCCTCTCCCGGAAGAAGCTTCTGCGCCCCCCCTCGGAAAAGGGGAACCACCACTACTTTGTCAGCGAC
GTCCCGGCCGCCTTCATCAGGGTGGGGAACCGCTTCCTGGGCGGACGTCTGGGCGATGTGTACCAGGTGAATCTTGATGA
CGAGCGGGAGGAAGGGTAG

Upstream 100 bases:

>100_bases
CGCACAGGCGCGGCAAATGGCTTGCCTCAGCCGTAAGAATAGGTTTATAGTTCGCATTTACGTTGTATCCCACCACAGTG
AAAAAGGAATACCCATACCC

Downstream 100 bases:

>100_bases
CCATGGCGCCGGTACGACGCAAGAAGAGTACGATAAACCTGCTGGTCCCCTTCCTGATCATCGCCCTGGTGTTCGGTTTC
CTGATCTGGAACAAGTACCG

Product: glutamate racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MSWRSIGIFDSGVGGLTVLREIIKAMPQEDTIYFGDTARVPYGTKSPETVIRYAHEITSFLVRRDIKLLVVACNTVSAVA
LNGLKRHFPIPVVGVIEPGAKRAVEVSRSGRIGVIGTAGTIKSSAYSRAIKRLNAQAEVLTRACPLFVPLAEEGWIDNQV
ARLTAQSYLQDLKEAGVDTLVLGCTHYPLLKPLICETMGPDVTLVDSAEETARSVAEILSRKKLLRPPSEKGNHHYFVSD
VPAAFIRVGNRFLGGRLGDVYQVNLDDEREEG

Sequences:

>Translated_272_residues
MSWRSIGIFDSGVGGLTVLREIIKAMPQEDTIYFGDTARVPYGTKSPETVIRYAHEITSFLVRRDIKLLVVACNTVSAVA
LNGLKRHFPIPVVGVIEPGAKRAVEVSRSGRIGVIGTAGTIKSSAYSRAIKRLNAQAEVLTRACPLFVPLAEEGWIDNQV
ARLTAQSYLQDLKEAGVDTLVLGCTHYPLLKPLICETMGPDVTLVDSAEETARSVAEILSRKKLLRPPSEKGNHHYFVSD
VPAAFIRVGNRFLGGRLGDVYQVNLDDEREEG
>Mature_271_residues
SWRSIGIFDSGVGGLTVLREIIKAMPQEDTIYFGDTARVPYGTKSPETVIRYAHEITSFLVRRDIKLLVVACNTVSAVAL
NGLKRHFPIPVVGVIEPGAKRAVEVSRSGRIGVIGTAGTIKSSAYSRAIKRLNAQAEVLTRACPLFVPLAEEGWIDNQVA
RLTAQSYLQDLKEAGVDTLVLGCTHYPLLKPLICETMGPDVTLVDSAEETARSVAEILSRKKLLRPPSEKGNHHYFVSDV
PAAFIRVGNRFLGGRLGDVYQVNLDDEREEG

Specific function: Provides the (R)-glutamate required for cell wall biosynthesis [H]

COG id: COG0796

COG function: function code M; Glutamate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

Organism=Escherichia coli, GI87082355, Length=222, Percent_Identity=35.5855855855856, Blast_Score=108, Evalue=5e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004391 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: =5.1.1.3 [H]

Molecular weight: Translated: 29731; Mature: 29599

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: PS00924 ASP_GLU_RACEMASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWRSIGIFDSGVGGLTVLREIIKAMPQEDTIYFGDTARVPYGTKSPETVIRYAHEITSF
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHH
LVRRDIKLLVVACNTVSAVALNGLKRHFPIPVVGVIEPGAKRAVEVSRSGRIGVIGTAGT
HHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCEEEEECCCH
IKSSAYSRAIKRLNAQAEVLTRACPLFVPLAEEGWIDNQVARLTAQSYLQDLKEAGVDTL
HHHHHHHHHHHHHCHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE
VLGCTHYPLLKPLICETMGPDVTLVDSAEETARSVAEILSRKKLLRPPSEKGNHHYFVSD
EECCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHH
VPAAFIRVGNRFLGGRLGDVYQVNLDDEREEG
HHHHHHHHCCHHHCCCCCCEEEECCCCCCCCC
>Mature Secondary Structure 
SWRSIGIFDSGVGGLTVLREIIKAMPQEDTIYFGDTARVPYGTKSPETVIRYAHEITSF
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHH
LVRRDIKLLVVACNTVSAVALNGLKRHFPIPVVGVIEPGAKRAVEVSRSGRIGVIGTAGT
HHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCEEEEECCCH
IKSSAYSRAIKRLNAQAEVLTRACPLFVPLAEEGWIDNQVARLTAQSYLQDLKEAGVDTL
HHHHHHHHHHHHHCHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE
VLGCTHYPLLKPLICETMGPDVTLVDSAEETARSVAEILSRKKLLRPPSEKGNHHYFVSD
EECCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHH
VPAAFIRVGNRFLGGRLGDVYQVNLDDEREEG
HHHHHHHHCCHHHCCCCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA