Click here to switch to the map view.

The map label for this gene is fadL [C]

Identifier: 118579834

GI number: 118579834

Start: 1505361

End: 1506581

Strand: Direct

Name: fadL [C]

Synonym: Ppro_1410

Alternate gene names: 118579834

Gene position: 1505361-1506581 (Clockwise)

Preceding gene: 118579832

Following gene: 118579835

Centisome position: 37.56

GC content: 61.02

Gene sequence:

>1221_bases
ATGGACAGCATGGGAAGGCGTGTGGTTGTGGCGGCGCTGCTCTGCGCGGCAACCGTTACAGGAGGCGTACATCCGGCCCT
GGGGTCGGGATTCGGCATCTTCACCCAGGGCGCATCGGCCCTTGGTCAGGCCGATGCGGTTGTCGCCCACGGGGATGGGC
CTTCGGCGCTCTTTTTTAATCCGGCCCAGATCAACGGCTTAGCCGGGACCCAGCTTGAGTTCGGTACCACCCTGATCTTC
CCCCACCGGGAGTATAAAGACTCCAGCGGCGATGTTTCGCACACCAAGGATTCGGTCTTCTACCCCAGCAGTTTCTATCT
GACCCATGCATTCAACGACAGCATCAGCGCCGGCCTGGCCGTCTTCAACCCCTTCGGGCTGGGAACCGACTGGGGCGGGG
ACTGGCCGGGGCGCTACATCGCCACCACGTCCAAGATAACCACCTACAACATCAACCCGGTGGTCTCCTGGCGCATCGCT
CCCTTTCTCTCCATCGCCGCCGGTCTGGATATCGTGCAGCTGGATGCGACGTTTAAGAACAAGATCTTTACTCCTTCCGG
CGATGTGAAGCAGAAATTCACCGGCGACGGCACGGGCCTGGGCTACAACCTGGGGCTGTTCATCGATGCCGGAAAGGGGA
TCACTATAGGCGCCTCCTACCGCAGCGAGGTGAAGATCGATATCGACGGAAAAGACGAGTTCAGCCCAGCGGTCTATCCT
GATATGGACGGAAAAACCTCTCTGAAATTGCCCCAGCAGGTTTTAGCCGGTGTGGCCTGGCAGGCCAGCGACCGGTTGGT
AGTGGAGACCGGCATGCGCTGGGAGGACTGGAGATCCTTCAAGCAACTGCGCATCAGCTTGGACCAACCGGGGGGGGGCT
CCACCGTCGCAACCTATCCCCGCAATTGGCACTCCACCTTTGCCGTGAACGCCGGTGGGAAATACCGGTTTAACGATAGC
CTGTCAATCATGGCCGGCTACCTGTACGGCTGGAACCCGGTGCCGGACAGCACCTTTGAGCCGGCCATCCCCGACTCCGA
CAGCCATCTCTTCTGTCTGGGTGGGGAGCTGCGCCGGGGGAGCATGACCCTCAGTCTGGGGTACGGCTACCAGCTCCAGA
AGGGGCGCAGTAAGTCCACCAACCAGTACGGCTCTGTCGCCAACGGCGACTATGACTCCGACCTGCATCTCCTGGCCCTC
AGCCTGGGGTACCGCTTCTGA

Upstream 100 bases:

>100_bases
GACCGCTTGCCGTTGCAAAAGCAATAAATTGAATAATACTGGACGGTATGCTCGGGGGAGATCTCTTTGCCTTCCCGGCG
GTCAAGGTACGGAGGGGACA

Downstream 100 bases:

>100_bases
ATTTCTCCGACCGGGGAGGCCATGGATTGCGGAAGATCGGGACAGGGGCGCACAGGCGCGGCAAATGGCTTGCCTCAGCC
GTAAGAATAGGTTTATAGTT

Product: aromatic hydrocarbon degradation membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MDSMGRRVVVAALLCAATVTGGVHPALGSGFGIFTQGASALGQADAVVAHGDGPSALFFNPAQINGLAGTQLEFGTTLIF
PHREYKDSSGDVSHTKDSVFYPSSFYLTHAFNDSISAGLAVFNPFGLGTDWGGDWPGRYIATTSKITTYNINPVVSWRIA
PFLSIAAGLDIVQLDATFKNKIFTPSGDVKQKFTGDGTGLGYNLGLFIDAGKGITIGASYRSEVKIDIDGKDEFSPAVYP
DMDGKTSLKLPQQVLAGVAWQASDRLVVETGMRWEDWRSFKQLRISLDQPGGGSTVATYPRNWHSTFAVNAGGKYRFNDS
LSIMAGYLYGWNPVPDSTFEPAIPDSDSHLFCLGGELRRGSMTLSLGYGYQLQKGRSKSTNQYGSVANGDYDSDLHLLAL
SLGYRF

Sequences:

>Translated_406_residues
MDSMGRRVVVAALLCAATVTGGVHPALGSGFGIFTQGASALGQADAVVAHGDGPSALFFNPAQINGLAGTQLEFGTTLIF
PHREYKDSSGDVSHTKDSVFYPSSFYLTHAFNDSISAGLAVFNPFGLGTDWGGDWPGRYIATTSKITTYNINPVVSWRIA
PFLSIAAGLDIVQLDATFKNKIFTPSGDVKQKFTGDGTGLGYNLGLFIDAGKGITIGASYRSEVKIDIDGKDEFSPAVYP
DMDGKTSLKLPQQVLAGVAWQASDRLVVETGMRWEDWRSFKQLRISLDQPGGGSTVATYPRNWHSTFAVNAGGKYRFNDS
LSIMAGYLYGWNPVPDSTFEPAIPDSDSHLFCLGGELRRGSMTLSLGYGYQLQKGRSKSTNQYGSVANGDYDSDLHLLAL
SLGYRF
>Mature_406_residues
MDSMGRRVVVAALLCAATVTGGVHPALGSGFGIFTQGASALGQADAVVAHGDGPSALFFNPAQINGLAGTQLEFGTTLIF
PHREYKDSSGDVSHTKDSVFYPSSFYLTHAFNDSISAGLAVFNPFGLGTDWGGDWPGRYIATTSKITTYNINPVVSWRIA
PFLSIAAGLDIVQLDATFKNKIFTPSGDVKQKFTGDGTGLGYNLGLFIDAGKGITIGASYRSEVKIDIDGKDEFSPAVYP
DMDGKTSLKLPQQVLAGVAWQASDRLVVETGMRWEDWRSFKQLRISLDQPGGGSTVATYPRNWHSTFAVNAGGKYRFNDS
LSIMAGYLYGWNPVPDSTFEPAIPDSDSHLFCLGGELRRGSMTLSLGYGYQLQKGRSKSTNQYGSVANGDYDSDLHLLAL
SLGYRF

Specific function: Involved In Translocation Of Long-Chain Fatty Acids Across The Outer Membrane. It Is A Receptor For The Bacteriophage T2. FADl May Form A Specific Channel. [C]

COG id: COG2067

COG function: function code I; Long-chain fatty acid transport protein

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ompP1/fadL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR001702
- InterPro:   IPR005017 [H]

Pfam domain/function: PF03349 Toluene_X [H]

EC number: NA

Molecular weight: Translated: 43637; Mature: 43637

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSMGRRVVVAALLCAATVTGGVHPALGSGFGIFTQGASALGQADAVVAHGDGPSALFFN
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHCCCCCEEEEECCCCCEEEEC
PAQINGLAGTQLEFGTTLIFPHREYKDSSGDVSHTKDSVFYPSSFYLTHAFNDSISAGLA
HHHCCCCCCCEEECCEEEEECCHHCCCCCCCCCCCCCCEECCCCEEEEEECCCCCCCCEE
VFNPFGLGTDWGGDWPGRYIATTSKITTYNINPVVSWRIAPFLSIAAGLDIVQLDATFKN
EECCCCCCCCCCCCCCCCEEEEECEEEEEECCCEEEEEHHHHHHHHCCCEEEEECCHHHC
KIFTPSGDVKQKFTGDGTGLGYNLGLFIDAGKGITIGASYRSEVKIDIDGKDEFSPAVYP
CEECCCCCCCCEECCCCCCCEEEEEEEEECCCCEEEECCCCCEEEEEECCCCCCCCCCCC
DMDGKTSLKLPQQVLAGVAWQASDRLVVETGMRWEDWRSFKQLRISLDQPGGGSTVATYP
CCCCCCCCCCHHHHHCCCEECCCCEEEEECCCCHHHHHHHEEEEEEECCCCCCCEEEECC
RNWHSTFAVNAGGKYRFNDSLSIMAGYLYGWNPVPDSTFEPAIPDSDSHLFCLGGELRRG
CCCCCEEEECCCCEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCC
SMTLSLGYGYQLQKGRSKSTNQYGSVANGDYDSDLHLLALSLGYRF
EEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC
>Mature Secondary Structure
MDSMGRRVVVAALLCAATVTGGVHPALGSGFGIFTQGASALGQADAVVAHGDGPSALFFN
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHCCCCCEEEEECCCCCEEEEC
PAQINGLAGTQLEFGTTLIFPHREYKDSSGDVSHTKDSVFYPSSFYLTHAFNDSISAGLA
HHHCCCCCCCEEECCEEEEECCHHCCCCCCCCCCCCCCEECCCCEEEEEECCCCCCCCEE
VFNPFGLGTDWGGDWPGRYIATTSKITTYNINPVVSWRIAPFLSIAAGLDIVQLDATFKN
EECCCCCCCCCCCCCCCCEEEEECEEEEEECCCEEEEEHHHHHHHHCCCEEEEECCHHHC
KIFTPSGDVKQKFTGDGTGLGYNLGLFIDAGKGITIGASYRSEVKIDIDGKDEFSPAVYP
CEECCCCCCCCEECCCCCCCEEEEEEEEECCCCEEEECCCCCEEEEEECCCCCCCCCCCC
DMDGKTSLKLPQQVLAGVAWQASDRLVVETGMRWEDWRSFKQLRISLDQPGGGSTVATYP
CCCCCCCCCCHHHHHCCCEECCCCEEEEECCCCHHHHHHHEEEEEEECCCCCCCEEEECC
RNWHSTFAVNAGGKYRFNDSLSIMAGYLYGWNPVPDSTFEPAIPDSDSHLFCLGGELRRG
CCCCCEEEECCCCEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCC
SMTLSLGYGYQLQKGRSKSTNQYGSVANGDYDSDLHLLALSLGYRF
EEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]