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The map label for this gene is zntR [H]

Identifier: 118579818

GI number: 118579818

Start: 1485973

End: 1486539

Strand: Direct

Name: zntR [H]

Synonym: Ppro_1394

Alternate gene names: 118579818

Gene position: 1485973-1486539 (Clockwise)

Preceding gene: 118579817

Following gene: 118579819

Centisome position: 37.08

GC content: 67.02

Gene sequence:

>567_bases
ATGTATCGCATTGGTGAGCTGGCGGAGCGCTTCGGCATCTCCCGCAGCACCCTCCTGTACTATGACCGGATCGGGCTGCT
CTCGCCGTCCCTGCGCAGCGGGGCGGGTTACCGCCTCTATTCCGTTGCCGACCTGCAGCGGCTGGACGCGATCCGCTCCT
ATCGCCGGGCTGGCCTGGGGGTGGAGGATATCCGCTCCATACTTGCCTTTGGAGACGATGCGTCCACGGCGCTTCTGCAG
CGACGCCTGCGGGAGGTCGGCAGGGAGATCAATGCTTTGCAGGCCCAGCAGCGGGTGCTGGCCGGGATGCTGCGGGTCAG
GGGGGAGGACCCTCCCCGGACCAGCGTGGACAAGGATATGTTCGTGGCCATGCTGCGGGCCGCCGGCATGGATGACCAGG
CCATGGGGCGCCTGCATGCCGAATTCGAGCTCCGTGAGCCCCAAGCCCACCACGCCTTTCTCCTGTCGCTGGGCATTTTG
GAGAACGAGGCCCTGCTGATACGGCGCTGGTCGGCCGGTGGGGATAGTGAAGGGGAAACGGCTGCCCGGGACCGGGGGAG
CGCCTGA

Upstream 100 bases:

>100_bases
GGCTCGGATGTTCACCCGAGCAGATAGAGCGGATCCGCCGCGATTACGCCTAAGCAGCCAGCCCCCGGTGTGAACCGGGG
GCGTTTTTTCGGAGGAATGC

Downstream 100 bases:

>100_bases
TGAGGGGCGGCCGTGGAAGTGCGTCGGGTATGAACGCGTTCGTGGCATATGGGTCGGATTTGTGTTAAGTGATAGAGGCT
GCCCCAAGATCCTTTCCCCC

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: Zn(II)-responsive regulator of zntA [H]

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MYRIGELAERFGISRSTLLYYDRIGLLSPSLRSGAGYRLYSVADLQRLDAIRSYRRAGLGVEDIRSILAFGDDASTALLQ
RRLREVGREINALQAQQRVLAGMLRVRGEDPPRTSVDKDMFVAMLRAAGMDDQAMGRLHAEFELREPQAHHAFLLSLGIL
ENEALLIRRWSAGGDSEGETAARDRGSA

Sequences:

>Translated_188_residues
MYRIGELAERFGISRSTLLYYDRIGLLSPSLRSGAGYRLYSVADLQRLDAIRSYRRAGLGVEDIRSILAFGDDASTALLQ
RRLREVGREINALQAQQRVLAGMLRVRGEDPPRTSVDKDMFVAMLRAAGMDDQAMGRLHAEFELREPQAHHAFLLSLGIL
ENEALLIRRWSAGGDSEGETAARDRGSA
>Mature_188_residues
MYRIGELAERFGISRSTLLYYDRIGLLSPSLRSGAGYRLYSVADLQRLDAIRSYRRAGLGVEDIRSILAFGDDASTALLQ
RRLREVGREINALQAQQRVLAGMLRVRGEDPPRTSVDKDMFVAMLRAAGMDDQAMGRLHAEFELREPQAHHAFLLSLGIL
ENEALLIRRWSAGGDSEGETAARDRGSA

Specific function: Zinc-responsive transcriptional regulator of zntA [H]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789687, Length=134, Percent_Identity=34.3283582089552, Blast_Score=75, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR015358
- InterPro:   IPR011788 [H]

Pfam domain/function: PF00376 MerR; PF09278 MerR-DNA-bind [H]

EC number: NA

Molecular weight: Translated: 20935; Mature: 20935

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRIGELAERFGISRSTLLYYDRIGLLSPSLRSGAGYRLYSVADLQRLDAIRSYRRAGLG
CCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCC
VEDIRSILAFGDDASTALLQRRLREVGREINALQAQQRVLAGMLRVRGEDPPRTSVDKDM
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
FVAMLRAAGMDDQAMGRLHAEFELREPQAHHAFLLSLGILENEALLIRRWSAGGDSEGET
HHHHHHHCCCCHHHHHHHHHHEECCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCH
AARDRGSA
HHHCCCCC
>Mature Secondary Structure
MYRIGELAERFGISRSTLLYYDRIGLLSPSLRSGAGYRLYSVADLQRLDAIRSYRRAGLG
CCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCC
VEDIRSILAFGDDASTALLQRRLREVGREINALQAQQRVLAGMLRVRGEDPPRTSVDKDM
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
FVAMLRAAGMDDQAMGRLHAEFELREPQAHHAFLLSLGILENEALLIRRWSAGGDSEGET
HHHHHHHCCCCHHHHHHHHHHEECCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCH
AARDRGSA
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]