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The map label for this gene is ydeM [C]

Identifier: 118579784

GI number: 118579784

Start: 1438163

End: 1439059

Strand: Reverse

Name: ydeM [C]

Synonym: Ppro_1357

Alternate gene names: 118579784

Gene position: 1439059-1438163 (Counterclockwise)

Preceding gene: 118579787

Following gene: 118579783

Centisome position: 35.9

GC content: 67.22

Gene sequence:

>897_bases
ATGCAGCCATCATGTTACGTCACCACCTTCCCCTGCCCGGACAAGCCGGGGCGTCTGCTCCTCCTGGCCACCCGGCGCTG
CGCCGTGATGGAGCTGTCCGACGAACTGTGGCAGCGAATGCGGGACGGCGGGGAGATGGAAGAGGAAGAGCGCGAGACCC
TGCAACGCCTGGGGGTGCTGGTGCATGACCGGGAGGCGGAGAAGGAGGAGATGCGGGAGACCTTCGACCGGATCAACCGG
GAGAGCCGCCACCTGTCCGTTGTCGCGGCCCTGACCATGGAGTGCAACCTGGCCTGCCCCTACTGCTTCAAGGCCCCCTT
CCGGGGGGAGCAGACCATGGACGACGCCATTGCCGACCTGCTGATCCGGCGCATGAGCGAGCGCATGTCCCAGGGGCTGG
ATCTGACCGTGGATTTCTACGGTGGCGAGGCACTGCTGCAGCTTACGCTTCTGAAGCGCATCGCCACCGCCCTGCAAAGG
GCCGCCCTTGAGCATGGCGTGACGTTCCAGTTCAACATCTTCAGCAACGGCACCCTGCTCACCCGGCCCGTGGTGGAGGA
GCTGCTCCCCCTGGGGCTGGCTGCGGTGCGCCTCACCCTGGACGGCCCGCCGGACATCCACGACAGCCAGCGCCCCTTCG
TCTCCGGCAGGGGGAGCTTCGCCGCCATCATGGAGAACATCCACGCCATCCATGACATCCTGCCCATCGACCTGGGGGGC
AACTTCACCCGCGAAAACTACCGCCGCTTCCCGGAGCTTCTGGACCTGTTGATCGCCCGGGGGATCGACCCGGCCAGGTT
CAAGGCGGTCGGCTTCTCGCCGGTGGTGCCCCGGGCCGACGGAAGCCTGGCCGGCGACCTGGGGGGCACCCCGCGGGGTC
AGGCATTGAACCATTGA

Upstream 100 bases:

>100_bases
GAAGATGAAACCAACACCCTCTCTTTTCGACCGGCACGTTACGCCTGAACAAACAGCAGCAGGTTCAAATCTTCAAAATA
TGCCCCCGCAAGGAGCCACC

Downstream 100 bases:

>100_bases
ACTTCGAGCAGCTCTTTGGCACGAAGCCCGAAACTTGGCTGCACATTCAATTCATCAATGCCTGCCCCACAGTCTCCATA
ATCTCAATCTGCGCAGCTTC

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: Radical SAM Domain Protein; Radical SAM Family Protein; Arylsulfatase Regulator; Arylsulfatase Regulator Fe-S Oxidoreductase; AstB/ChuR-Related Protein; Radical Sam Domain Protein; Heme Biosynthesis Related Protein; Arylsulfatase Regulatory Protein; Radical Sam Family Protein; Radical SAM-Family Protein; Fe-S Oxidoreductases; Arylsulfatase-Activating AtsB; Heme Biosynthesis Family Protein; Transcriptional Regulator; Fe-S Oxidoreductase; Radical SAM

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MQPSCYVTTFPCPDKPGRLLLLATRRCAVMELSDELWQRMRDGGEMEEEERETLQRLGVLVHDREAEKEEMRETFDRINR
ESRHLSVVAALTMECNLACPYCFKAPFRGEQTMDDAIADLLIRRMSERMSQGLDLTVDFYGGEALLQLTLLKRIATALQR
AALEHGVTFQFNIFSNGTLLTRPVVEELLPLGLAAVRLTLDGPPDIHDSQRPFVSGRGSFAAIMENIHAIHDILPIDLGG
NFTRENYRRFPELLDLLIARGIDPARFKAVGFSPVVPRADGSLAGDLGGTPRGQALNH

Sequences:

>Translated_298_residues
MQPSCYVTTFPCPDKPGRLLLLATRRCAVMELSDELWQRMRDGGEMEEEERETLQRLGVLVHDREAEKEEMRETFDRINR
ESRHLSVVAALTMECNLACPYCFKAPFRGEQTMDDAIADLLIRRMSERMSQGLDLTVDFYGGEALLQLTLLKRIATALQR
AALEHGVTFQFNIFSNGTLLTRPVVEELLPLGLAAVRLTLDGPPDIHDSQRPFVSGRGSFAAIMENIHAIHDILPIDLGG
NFTRENYRRFPELLDLLIARGIDPARFKAVGFSPVVPRADGSLAGDLGGTPRGQALNH
>Mature_298_residues
MQPSCYVTTFPCPDKPGRLLLLATRRCAVMELSDELWQRMRDGGEMEEEERETLQRLGVLVHDREAEKEEMRETFDRINR
ESRHLSVVAALTMECNLACPYCFKAPFRGEQTMDDAIADLLIRRMSERMSQGLDLTVDFYGGEALLQLTLLKRIATALQR
AALEHGVTFQFNIFSNGTLLTRPVVEELLPLGLAAVRLTLDGPPDIHDSQRPFVSGRGSFAAIMENIHAIHDILPIDLGG
NFTRENYRRFPELLDLLIARGIDPARFKAVGFSPVVPRADGSLAGDLGGTPRGQALNH

Specific function: Unknown

COG id: COG0641

COG function: function code R; Arylsulfatase regulator (Fe-S oxidoreductase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33346; Mature: 33346

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPSCYVTTFPCPDKPGRLLLLATRRCAVMELSDELWQRMRDGGEMEEEERETLQRLGVL
CCCCEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCH
VHDREAEKEEMRETFDRINRESRHLSVVAALTMECNLACPYCFKAPFRGEQTMDDAIADL
HCCCCCHHHHHHHHHHHHCCHHHHHHHHHEEHHHCCCCCCHHHCCCCCCCHHHHHHHHHH
LIRRMSERMSQGLDLTVDFYGGEALLQLTLLKRIATALQRAALEHGVTFQFNIFSNGTLL
HHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEE
TRPVVEELLPLGLAAVRLTLDGPPDIHDSQRPFVSGRGSFAAIMENIHAIHDILPIDLGG
HHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCC
NFTRENYRRFPELLDLLIARGIDPARFKAVGFSPVVPRADGSLAGDLGGTPRGQALNH
CCCHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQPSCYVTTFPCPDKPGRLLLLATRRCAVMELSDELWQRMRDGGEMEEEERETLQRLGVL
CCCCEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCH
VHDREAEKEEMRETFDRINRESRHLSVVAALTMECNLACPYCFKAPFRGEQTMDDAIADL
HCCCCCHHHHHHHHHHHHCCHHHHHHHHHEEHHHCCCCCCHHHCCCCCCCHHHHHHHHHH
LIRRMSERMSQGLDLTVDFYGGEALLQLTLLKRIATALQRAALEHGVTFQFNIFSNGTLL
HHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEE
TRPVVEELLPLGLAAVRLTLDGPPDIHDSQRPFVSGRGSFAAIMENIHAIHDILPIDLGG
HHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCC
NFTRENYRRFPELLDLLIARGIDPARFKAVGFSPVVPRADGSLAGDLGGTPRGQALNH
CCCHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA