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The map label for this gene is yccM [H]

Identifier: 118579708

GI number: 118579708

Start: 1341098

End: 1342045

Strand: Reverse

Name: yccM [H]

Synonym: Ppro_1279

Alternate gene names: 118579708

Gene position: 1342045-1341098 (Counterclockwise)

Preceding gene: 118579709

Following gene: 118579707

Centisome position: 33.48

GC content: 64.14

Gene sequence:

>948_bases
GTGAACCTGACTCGGAGCCGGCTGCTGGTTCAATCCCTCTCCTTCGGCATCCTGACCTACGGCGGCCGTTTCGGCCTGAA
CCTGGGGCACGCCCTCCCCTGCCTCTCCTGCCCCTATGTTAACGGTTGCGGAGGGCACTGTTTCCTGATGGCGCTGCAGG
GTTCCTTCTGGGGAGTGCAGGCTTCCCTGTCGGCCCTGGCCGGTCCGCGCGGCCTGGAGACCCTCAGGATGCTGGCGTTG
TTCATCCTGCTGGCACTGCAGCTCTCCAAACTCTGGTGCGGCTGGATCTGCCCCTTCGGCACGCTGCAGGACGCCCTCAC
CTGGGTCAGGAGCCGGCTCGGCATACCCGAGGCACGCTGGTCATGGGCAACGTCCGACCGGCTGCGCTGGGTGAAATACA
TCTTCCTGCTCCTGCTGCTGGCAATTCCGCTGATGATCGCCAACCTGGGGCTGCACGGCGATTACGGGCTCCCCTTCTGC
CAGATCTGCCCGGCCAAGCCGCTCATGCCGCTCTTTACCGGAGACACGGCCCACCTGGCCATCGATACCACCAACGCCAT
CACCACCGCCATGACGGTCCTCTCCCTGCTGCTGGCGGGCGGTTTTCTGGCCGGGATGTTCTTCAGGGAGCGTTTCTTCT
GCATCTTCTGCCCCATGCTGGCCCTGTTGGGGCTGGTGCAGCGCTTCGGCCTGGTCAGGTTCACCAAGAACGTCAACGCC
TGCGTCGGCTGCGGGAGCTGCGCTCGGAGCTGCCCCCTGGAGATCCGCACCGTTCGGGCAGAACTGGTGAAGCGTGACGT
CATGTCCCCCGAGTGCATGGCCTGCATGACCTGCGCCGATTCCTGTGCCCATGACGGGTCACTTTCGTTCCACTGGCTGA
AGTGGCGCATCTTCGCATCGTCCGCCGTCGGTGCGGCCCGCAGATTCAGGAAAGGTTTGTTTTCATGA

Upstream 100 bases:

>100_bases
ACCGTACCGGCCACCACCGCCTGGTCCCCGGCCTGCTGACCCTGGGCTGTTCCTGCGGCCTGACGGTTCTGGCGGTGACC
GTAAAACGGAGAAAAACGGC

Downstream 100 bases:

>100_bases
ACAATGTTGTGACCCGCAGGGAAGAACTGCAGCAGCTTCGGGCCAGGGCCGACATGGCAACGGAGTATGCCGCGGAAATG
GCGGCGCTTCGTTCCCGGAA

Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MNLTRSRLLVQSLSFGILTYGGRFGLNLGHALPCLSCPYVNGCGGHCFLMALQGSFWGVQASLSALAGPRGLETLRMLAL
FILLALQLSKLWCGWICPFGTLQDALTWVRSRLGIPEARWSWATSDRLRWVKYIFLLLLLAIPLMIANLGLHGDYGLPFC
QICPAKPLMPLFTGDTAHLAIDTTNAITTAMTVLSLLLAGGFLAGMFFRERFFCIFCPMLALLGLVQRFGLVRFTKNVNA
CVGCGSCARSCPLEIRTVRAELVKRDVMSPECMACMTCADSCAHDGSLSFHWLKWRIFASSAVGAARRFRKGLFS

Sequences:

>Translated_315_residues
MNLTRSRLLVQSLSFGILTYGGRFGLNLGHALPCLSCPYVNGCGGHCFLMALQGSFWGVQASLSALAGPRGLETLRMLAL
FILLALQLSKLWCGWICPFGTLQDALTWVRSRLGIPEARWSWATSDRLRWVKYIFLLLLLAIPLMIANLGLHGDYGLPFC
QICPAKPLMPLFTGDTAHLAIDTTNAITTAMTVLSLLLAGGFLAGMFFRERFFCIFCPMLALLGLVQRFGLVRFTKNVNA
CVGCGSCARSCPLEIRTVRAELVKRDVMSPECMACMTCADSCAHDGSLSFHWLKWRIFASSAVGAARRFRKGLFS
>Mature_315_residues
MNLTRSRLLVQSLSFGILTYGGRFGLNLGHALPCLSCPYVNGCGGHCFLMALQGSFWGVQASLSALAGPRGLETLRMLAL
FILLALQLSKLWCGWICPFGTLQDALTWVRSRLGIPEARWSWATSDRLRWVKYIFLLLLLAIPLMIANLGLHGDYGLPFC
QICPAKPLMPLFTGDTAHLAIDTTNAITTAMTVLSLLLAGGFLAGMFFRERFFCIFCPMLALLGLVQRFGLVRFTKNVNA
CVGCGSCARSCPLEIRTVRAELVKRDVMSPECMACMTCADSCAHDGSLSFHWLKWRIFASSAVGAARRFRKGLFS

Specific function: Unknown

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1787226, Length=217, Percent_Identity=27.6497695852535, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34637; Mature: 34637

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
9.2 %Cys+Met (Translated Protein)
5.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
9.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLTRSRLLVQSLSFGILTYGGRFGLNLGHALPCLSCPYVNGCGGHCFLMALQGSFWGVQ
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHH
ASLSALAGPRGLETLRMLALFILLALQLSKLWCGWICPFGTLQDALTWVRSRLGIPEARW
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCC
SWATSDRLRWVKYIFLLLLLAIPLMIANLGLHGDYGLPFCQICPAKPLMPLFTGDTAHLA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCEECCCCEEEE
IDTTNAITTAMTVLSLLLAGGFLAGMFFRERFFCIFCPMLALLGLVQRFGLVRFTKNVNA
EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
CVGCGSCARSCPLEIRTVRAELVKRDVMSPECMACMTCADSCAHDGSLSFHWLKWRIFAS
HHCCCHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEHHH
SAVGAARRFRKGLFS
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MNLTRSRLLVQSLSFGILTYGGRFGLNLGHALPCLSCPYVNGCGGHCFLMALQGSFWGVQ
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHH
ASLSALAGPRGLETLRMLALFILLALQLSKLWCGWICPFGTLQDALTWVRSRLGIPEARW
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCC
SWATSDRLRWVKYIFLLLLLAIPLMIANLGLHGDYGLPFCQICPAKPLMPLFTGDTAHLA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCEECCCCEEEE
IDTTNAITTAMTVLSLLLAGGFLAGMFFRERFFCIFCPMLALLGLVQRFGLVRFTKNVNA
EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
CVGCGSCARSCPLEIRTVRAELVKRDVMSPECMACMTCADSCAHDGSLSFHWLKWRIFAS
HHCCCHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEHHH
SAVGAARRFRKGLFS
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]