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The map label for this gene is cbiX [H]

Identifier: 118579697

GI number: 118579697

Start: 1332969

End: 1333352

Strand: Direct

Name: cbiX [H]

Synonym: Ppro_1268

Alternate gene names: 118579697

Gene position: 1332969-1333352 (Clockwise)

Preceding gene: 118579696

Following gene: 118579698

Centisome position: 33.26

GC content: 60.42

Gene sequence:

>384_bases
ATGAAAACAGCGGTATTACTGATGGCGCACGGCAGCCGGATAGCCGAGGCGAACAATGATGCGCGTTATATCGCGGATAT
GATCCGCGGGATGAGCGGCCATGACATCGTCGAGGTCGCCTTTCGGGAGATGCACGAACCGAACATCCAGCAGGGGGTTG
ATATCTGCGTGGCCAAGGGGGCCGAACGGATACTGATGATGCCCTACTTCCTGTTCATGGGCGCCCACGTCCTGAAAGAC
CTGCCGGAGGAGATCGAGGCGGCCCGGAACCGGTACCCCTTCCTTGAGCTTGAGATGGGGCGGCATCTGGGGGTGCATCC
CAAGCTGGCCGAGCTGCAACTGGAGCGTGTTCGGGAATCCCTGGGACGGCTGGGGTGGAATTGA

Upstream 100 bases:

>100_bases
GAAATGGAAGATGGAGTGGCGCATGGCGGGGAACTGAGTGAAGGGCAACCTACAACCGCAATCGTTACCTGATCGTGGGA
ATAAAAAGGAGAGAGAAGCC

Downstream 100 bases:

>100_bases
TGGATTCATTGCAGATGAAACCTGAAGAGATCGAACGGGAATCGTTCCGCATCATCGACGCCGAGGCCGGGGAACACGGC
TGGCCCGCGGACGAGTGGCA

Product: cobalamin (vitamin B12) biosynthesis CbiX protein

Products: NA

Alternate protein names: CbiXL [H]

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MKTAVLLMAHGSRIAEANNDARYIADMIRGMSGHDIVEVAFREMHEPNIQQGVDICVAKGAERILMMPYFLFMGAHVLKD
LPEEIEAARNRYPFLELEMGRHLGVHPKLAELQLERVRESLGRLGWN

Sequences:

>Translated_127_residues
MKTAVLLMAHGSRIAEANNDARYIADMIRGMSGHDIVEVAFREMHEPNIQQGVDICVAKGAERILMMPYFLFMGAHVLKD
LPEEIEAARNRYPFLELEMGRHLGVHPKLAELQLERVRESLGRLGWN
>Mature_127_residues
MKTAVLLMAHGSRIAEANNDARYIADMIRGMSGHDIVEVAFREMHEPNIQQGVDICVAKGAERILMMPYFLFMGAHVLKD
LPEEIEAARNRYPFLELEMGRHLGVHPKLAELQLERVRESLGRLGWN

Specific function: Chelates cobalt to the cobalamin precursor as part of the anaerobic pathway to cobalamin biosynthesis [H]

COG id: COG2138

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiX family. CbiXL subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002762 [H]

Pfam domain/function: PF01903 CbiX [H]

EC number: =4.99.1.3 [H]

Molecular weight: Translated: 14454; Mature: 14454

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
7.1 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTAVLLMAHGSRIAEANNDARYIADMIRGMSGHDIVEVAFREMHEPNIQQGVDICVAKG
CCCEEEEEECCCCHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCC
AERILMMPYFLFMGAHVLKDLPEEIEAARNRYPFLELEMGRHLGVHPKLAELQLERVRES
CHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHH
LGRLGWN
HHHCCCC
>Mature Secondary Structure
MKTAVLLMAHGSRIAEANNDARYIADMIRGMSGHDIVEVAFREMHEPNIQQGVDICVAKG
CCCEEEEEECCCCHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCC
AERILMMPYFLFMGAHVLKDLPEEIEAARNRYPFLELEMGRHLGVHPKLAELQLERVRES
CHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHH
LGRLGWN
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9742225; 12917443 [H]