Click here to switch to the map view.

The map label for this gene is 118579675

Identifier: 118579675

GI number: 118579675

Start: 1304750

End: 1305547

Strand: Direct

Name: 118579675

Synonym: Ppro_1246

Alternate gene names: NA

Gene position: 1304750-1305547 (Clockwise)

Preceding gene: 118579674

Following gene: 118579676

Centisome position: 32.55

GC content: 56.02

Gene sequence:

>798_bases
ATGAAACAGCATGCTTTTAGAAAAACCGTGATGGTTCTTGCAGCCGTTGCCTGTTCCGCAGTTTCCTCGACAACGGCCCA
TGCCCACGACACCTGGGCGGTGATGCAGGATTACACCCTGGTAAAACCGGCGGCGCCGATGCTGAACGTGGTCTCCAGCC
ACCTGTTCTCGTTTCCCGCCAAGGATCTGGTGACGACCGACCGGGTTGCTTCGGTACTTTTTATCGCTCCCGACGGCACG
GAGACGCGCGGGGTTCCCGCTGGTAAGGATGGATTCCGGGCGCAGCATGATCTGAAATCACCCGGCACCCATTTATCGGT
GGTGGTGTCTCCGGCCGGTTTTTCCACGAAAACAACGGAAGGGTACAAGCAGGGCAAATCGAAGAAGGATGTGGATAACG
TGATTTCCTGTAATTACTCCGAGAAGTTCTCCAAGGCACTCTTCACGGTGGGGAAAGCGGGAGGCAATACTTTTTCCAGG
ACACTGGGGCACTCCCTGGAGATCGTCCCGCTGCAGGATCCCTCCGCAATGAAGGTGGGCGAGGTCATGTCTGTCAGAGT
ACTGTTCCAGGGCAAGCCGCTTCCCTCGGCGACGGTTTCCGGCGTGTACGCCGGTTTCTCCAATGATCCTGGCACCTTTG
CCTACAGCACCACCACCAACAAGGAAGGAATAGCGAAAGTTAAGCTGATCCATAACGGTCCCTGGTTGCTTTTGGTCAAG
CAGAAGAGCGCCTATCCGGACATGACCGTCTGCGACGCAAAATCCTATTCGTCGGCGCTTACCTTCAGCGTCAGATAG

Upstream 100 bases:

>100_bases
ATGCCCGCAGGACCTTCTACGCCAGCATGAAATACACCTTTTAGGGAACTCCCGTGCTCTTTGCCGAGGACTTCCGCATA
CCACCACTAAGGAGAATGAG

Downstream 100 bases:

>100_bases
TTTGTTGAACGGTGGAGGGGAGAGAGGCGCTCGTCTTTTTTCCCTCCAGCCACTATCCCACCCCTCCGGAGTCATCATGT
TGCGCACATTTTTAGTCTGT

Product: Co2+ ABC transporter periplasmic component-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MKQHAFRKTVMVLAAVACSAVSSTTAHAHDTWAVMQDYTLVKPAAPMLNVVSSHLFSFPAKDLVTTDRVASVLFIAPDGT
ETRGVPAGKDGFRAQHDLKSPGTHLSVVVSPAGFSTKTTEGYKQGKSKKDVDNVISCNYSEKFSKALFTVGKAGGNTFSR
TLGHSLEIVPLQDPSAMKVGEVMSVRVLFQGKPLPSATVSGVYAGFSNDPGTFAYSTTTNKEGIAKVKLIHNGPWLLLVK
QKSAYPDMTVCDAKSYSSALTFSVR

Sequences:

>Translated_265_residues
MKQHAFRKTVMVLAAVACSAVSSTTAHAHDTWAVMQDYTLVKPAAPMLNVVSSHLFSFPAKDLVTTDRVASVLFIAPDGT
ETRGVPAGKDGFRAQHDLKSPGTHLSVVVSPAGFSTKTTEGYKQGKSKKDVDNVISCNYSEKFSKALFTVGKAGGNTFSR
TLGHSLEIVPLQDPSAMKVGEVMSVRVLFQGKPLPSATVSGVYAGFSNDPGTFAYSTTTNKEGIAKVKLIHNGPWLLLVK
QKSAYPDMTVCDAKSYSSALTFSVR
>Mature_265_residues
MKQHAFRKTVMVLAAVACSAVSSTTAHAHDTWAVMQDYTLVKPAAPMLNVVSSHLFSFPAKDLVTTDRVASVLFIAPDGT
ETRGVPAGKDGFRAQHDLKSPGTHLSVVVSPAGFSTKTTEGYKQGKSKKDVDNVISCNYSEKFSKALFTVGKAGGNTFSR
TLGHSLEIVPLQDPSAMKVGEVMSVRVLFQGKPLPSATVSGVYAGFSNDPGTFAYSTTTNKEGIAKVKLIHNGPWLLLVK
QKSAYPDMTVCDAKSYSSALTFSVR

Specific function: Unknown

COG id: COG5266

COG function: function code P; ABC-type Co2+ transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019613 [H]

Pfam domain/function: PF10670 NikM [H]

EC number: NA

Molecular weight: Translated: 28297; Mature: 28297

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQHAFRKTVMVLAAVACSAVSSTTAHAHDTWAVMQDYTLVKPAAPMLNVVSSHLFSFPA
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCEEECCCHHHHHHHHHHHHHCCC
KDLVTTDRVASVLFIAPDGTETRGVPAGKDGFRAQHDLKSPGTHLSVVVSPAGFSTKTTE
HHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCH
GYKQGKSKKDVDNVISCNYSEKFSKALFTVGKAGGNTFSRTLGHSLEIVPLQDPSAMKVG
HHHCCCCCCCHHHHEECCCHHHHHHHHHHHHCCCCCHHHHHHCCCEEEEECCCCCCCCCC
EVMSVRVLFQGKPLPSATVSGVYAGFSNDPGTFAYSTTTNKEGIAKVKLIHNGPWLLLVK
CEEEEEEEEECCCCCCHHHHEEEECCCCCCCCEEEEECCCCCCCEEEEEEECCCEEEEEE
QKSAYPDMTVCDAKSYSSALTFSVR
CCCCCCCCEEECCCCCCCEEEEEEC
>Mature Secondary Structure
MKQHAFRKTVMVLAAVACSAVSSTTAHAHDTWAVMQDYTLVKPAAPMLNVVSSHLFSFPA
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCEEECCCHHHHHHHHHHHHHCCC
KDLVTTDRVASVLFIAPDGTETRGVPAGKDGFRAQHDLKSPGTHLSVVVSPAGFSTKTTE
HHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCH
GYKQGKSKKDVDNVISCNYSEKFSKALFTVGKAGGNTFSRTLGHSLEIVPLQDPSAMKVG
HHHCCCCCCCHHHHEECCCHHHHHHHHHHHHCCCCCHHHHHHCCCEEEEECCCCCCCCCC
EVMSVRVLFQGKPLPSATVSGVYAGFSNDPGTFAYSTTTNKEGIAKVKLIHNGPWLLLVK
CEEEEEEEEECCCCCCHHHHEEEECCCCCCCCEEEEECCCCCCCEEEEEEECCCEEEEEE
QKSAYPDMTVCDAKSYSSALTFSVR
CCCCCCCCEEECCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]