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The map label for this gene is 118579653

Identifier: 118579653

GI number: 118579653

Start: 1278854

End: 1279600

Strand: Reverse

Name: 118579653

Synonym: Ppro_1224

Alternate gene names: NA

Gene position: 1279600-1278854 (Counterclockwise)

Preceding gene: 118579654

Following gene: 118579652

Centisome position: 31.93

GC content: 67.6

Gene sequence:

>747_bases
ATGCTGATCGAGCAGCTCTCCTACTCCAATCGCTGGCGGCGGGTACACCCCGCCGCCAAATGCGTCTTTGCGCTCTGCGG
CATGATTGCCGCCTTTGCCGCATCAACCCCGACCATCGCCCTCCTGTTGGCCGCGCTCCTGGCGGCCGTCACCTGCCGCG
GGGCACGCATTCCCCTGCGCTGCTATCTGCGCGTTAGCGCCGCGCCGCTCCTGTTCCTGCTGGTAAGCGGCACGACCCTG
GCGGTGTCCCTGGGGTGGCAAGCCAGCTTCCCCTGGCTGACCTTAAGCAGCGGGGATGTCCAGTTGCGGGAGGCGTTGCA
CGTTGCCGGACGCTCTCTGGTCTGCCTGGCTGCGCTGCTCTTCCTGGCGCTCTCCACGCCGCTCAACGACCTTATCTCGC
TGTTGCGCCGCCTGGGCTTTCCGGAGGTACTGACCGACCTGATGACCCTCTGCTACCGCACCCTGTTCGTCTTCTTGGAG
GCGACCCACGACATCGTCACCGCCCAGGCGTCGCGCCTGGGTTACGCCACCCCCCGGCTGGCGCTGCGCTCCCTGGGCAT
CATGGTGGCGGCGCTCACGGTCCAGGTCTGGCAACGCTCCCGGGCTCTGCAGCAGGCGGCTCTCTCCCGCGCCAATGACG
GCCCGCTCAGATTCCTGACCCCAACGTATCCCGACGGCGCCAGCAGCATCCTGGTCGGCCTGACGGCGGGCTGCCTCCTG
ATCATCCTGGCGGTGATGCACCCATGA

Upstream 100 bases:

>100_bases
TCTTCGCCCTCCAGGCCGCCCTGGGAGCCGGATTCATCGGCTACTGGCTGGGGAGTTCGGTGACCCGCGCCAGGCTGCGC
CGAAACAAGAGCGAGGCCTG

Downstream 100 bases:

>100_bases
CACCAACCGGAAAAAGCATACTGGAACTGTGCGGGGTCAGTTACCGCTATCCCGACGGAAGTCGGGGGCTGGATGACTGC
TCCATCTCCTTTCACCAGGG

Product: cobalt ABC transporter inner membrane subunit CbiQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MLIEQLSYSNRWRRVHPAAKCVFALCGMIAAFAASTPTIALLLAALLAAVTCRGARIPLRCYLRVSAAPLLFLLVSGTTL
AVSLGWQASFPWLTLSSGDVQLREALHVAGRSLVCLAALLFLALSTPLNDLISLLRRLGFPEVLTDLMTLCYRTLFVFLE
ATHDIVTAQASRLGYATPRLALRSLGIMVAALTVQVWQRSRALQQAALSRANDGPLRFLTPTYPDGASSILVGLTAGCLL
IILAVMHP

Sequences:

>Translated_248_residues
MLIEQLSYSNRWRRVHPAAKCVFALCGMIAAFAASTPTIALLLAALLAAVTCRGARIPLRCYLRVSAAPLLFLLVSGTTL
AVSLGWQASFPWLTLSSGDVQLREALHVAGRSLVCLAALLFLALSTPLNDLISLLRRLGFPEVLTDLMTLCYRTLFVFLE
ATHDIVTAQASRLGYATPRLALRSLGIMVAALTVQVWQRSRALQQAALSRANDGPLRFLTPTYPDGASSILVGLTAGCLL
IILAVMHP
>Mature_248_residues
MLIEQLSYSNRWRRVHPAAKCVFALCGMIAAFAASTPTIALLLAALLAAVTCRGARIPLRCYLRVSAAPLLFLLVSGTTL
AVSLGWQASFPWLTLSSGDVQLREALHVAGRSLVCLAALLFLALSTPLNDLISLLRRLGFPEVLTDLMTLCYRTLFVFLE
ATHDIVTAQASRLGYATPRLALRSLGIMVAALTVQVWQRSRALQQAALSRANDGPLRFLTPTYPDGASSILVGLTAGCLL
IILAVMHP

Specific function: Unknown

COG id: COG0619

COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003339
- InterPro:   IPR012809 [H]

Pfam domain/function: PF02361 CbiQ [H]

EC number: NA

Molecular weight: Translated: 26727; Mature: 26727

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIEQLSYSNRWRRVHPAAKCVFALCGMIAAFAASTPTIALLLAALLAAVTCRGARIPLR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHH
CYLRVSAAPLLFLLVSGTTLAVSLGWQASFPWLTLSSGDVQLREALHVAGRSLVCLAALL
EEEEHHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHH
FLALSTPLNDLISLLRRLGFPEVLTDLMTLCYRTLFVFLEATHDIVTAQASRLGYATPRL
HHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
ALRSLGIMVAALTVQVWQRSRALQQAALSRANDGPLRFLTPTYPDGASSILVGLTAGCLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHH
IILAVMHP
HHHHHHCC
>Mature Secondary Structure
MLIEQLSYSNRWRRVHPAAKCVFALCGMIAAFAASTPTIALLLAALLAAVTCRGARIPLR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHH
CYLRVSAAPLLFLLVSGTTLAVSLGWQASFPWLTLSSGDVQLREALHVAGRSLVCLAALL
EEEEHHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHH
FLALSTPLNDLISLLRRLGFPEVLTDLMTLCYRTLFVFLEATHDIVTAQASRLGYATPRL
HHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
ALRSLGIMVAALTVQVWQRSRALQQAALSRANDGPLRFLTPTYPDGASSILVGLTAGCLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHH
IILAVMHP
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]