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The map label for this gene is nrfH [H]

Identifier: 118579628

GI number: 118579628

Start: 1250951

End: 1251415

Strand: Direct

Name: nrfH [H]

Synonym: Ppro_1199

Alternate gene names: 118579628

Gene position: 1250951-1251415 (Clockwise)

Preceding gene: 118579627

Following gene: 118579629

Centisome position: 31.21

GC content: 56.77

Gene sequence:

>465_bases
ATGCTGAACCGGCTGAACAAGAAGCGGGCGATGATGCTGGGCCTGGCGGGAGTGGCAACACTGCTGGCCGCGGCTTTTCT
GCTGCTGGGGCCTCCGGGACTGTTGGCGAAATCCGAATCTCCCGACTTCTGTGCCAGTTGCCATGTCATGGAAAGCCAAT
ATACCGCTTTTTTGCGTTCGGGAGCGCACCGCAGGTTTCGCTGCGTGGACTGCCACCTACCCAACGAAAATCTGGCGAGC
CATTACATTTGGAAGTCCATCGATGGCATGAAGGACGTGATCTTTTTCTACTCAGGCCACATTCCGGAACGGATCAGGCT
TTCCCGTCATGGAACCAAGGTGCTCCAGGCTAACTGTATCAGGTGTCATGTAGAGCTGGTTTCGCCCATCAACACCGAAC
GGCACTGCTGGAGCTGCCATCGAGGCATCACCCATCTGCGTAGCGGAGCACGGGTAACACGCTGA

Upstream 100 bases:

>100_bases
CGCGGTTCGTTTGTGATACAGTTTGAACATCGTTGCCGCCGGGCCTGATGGTGACGCGTGTGATGGGGTGCAGTGATCCG
GTTACGGGGGAGGTGGCATG

Downstream 100 bases:

>100_bases
ATTCAGTTAAAAGGGGGTATTCCAATGAGAATAAGGACCGTTGTGTGTGTCGTTGTCGTTGCGTGTGTGTGGCTGCTCGC
CGCCGGCTGCGCTCCCCAGA

Product: cytochrome c nitrite reductase, small subunit NrfH

Products: H2O; trimethylamine; NAD [C]

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MLNRLNKKRAMMLGLAGVATLLAAAFLLLGPPGLLAKSESPDFCASCHVMESQYTAFLRSGAHRRFRCVDCHLPNENLAS
HYIWKSIDGMKDVIFFYSGHIPERIRLSRHGTKVLQANCIRCHVELVSPINTERHCWSCHRGITHLRSGARVTR

Sequences:

>Translated_154_residues
MLNRLNKKRAMMLGLAGVATLLAAAFLLLGPPGLLAKSESPDFCASCHVMESQYTAFLRSGAHRRFRCVDCHLPNENLAS
HYIWKSIDGMKDVIFFYSGHIPERIRLSRHGTKVLQANCIRCHVELVSPINTERHCWSCHRGITHLRSGARVTR
>Mature_154_residues
MLNRLNKKRAMMLGLAGVATLLAAAFLLLGPPGLLAKSESPDFCASCHVMESQYTAFLRSGAHRRFRCVDCHLPNENLAS
HYIWKSIDGMKDVIFFYSGHIPERIRLSRHGTKVLQANCIRCHVELVSPINTERHCWSCHRGITHLRSGARVTR

Specific function: Subunit of the nitrite reductase complex that mediates electron transfer from quinol to the catalytic subunit [H]

COG id: COG3005

COG function: function code C; Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017571
- InterPro:   IPR011031
- InterPro:   IPR005126 [H]

Pfam domain/function: PF03264 Cytochrom_NNT [H]

EC number: NA

Molecular weight: Translated: 17368; Mature: 17368

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: PS00028 ZINC_FINGER_C2H2_1 ; PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
5.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
8.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNRLNKKRAMMLGLAGVATLLAAAFLLLGPPGLLAKSESPDFCASCHVMESQYTAFLRS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
GAHRRFRCVDCHLPNENLASHYIWKSIDGMKDVIFFYSGHIPERIRLSRHGTKVLQANCI
CCCCCEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHH
RCHVELVSPINTERHCWSCHRGITHLRSGARVTR
HEEEEHHCCCCCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLNRLNKKRAMMLGLAGVATLLAAAFLLLGPPGLLAKSESPDFCASCHVMESQYTAFLRS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
GAHRRFRCVDCHLPNENLASHYIWKSIDGMKDVIFFYSGHIPERIRLSRHGTKVLQANCI
CCCCCEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHH
RCHVELVSPINTERHCWSCHRGITHLRSGARVTR
HEEEEHHCCCCCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: trimethylamine-N-oxide; NADH [C]

Specific reaction: trimethylamine-N-oxide + NADH = H2O + trimethylamine + NAD [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10672190; 14500908 [H]