Definition Pelobacter propionicus DSM 2379 chromosome, complete genome.
Accession NC_008609
Length 4,008,000

Click here to switch to the map view.

The map label for this gene is 118579626

Identifier: 118579626

GI number: 118579626

Start: 1249136

End: 1249969

Strand: Direct

Name: 118579626

Synonym: Ppro_1197

Alternate gene names: NA

Gene position: 1249136-1249969 (Clockwise)

Preceding gene: 118579625

Following gene: 118579627

Centisome position: 31.17

GC content: 59.71

Gene sequence:

>834_bases
ATGATTACTACTACGCTGGAAATTTTTCTGATCGCCATCGCAGCCGGCGTTGTCGGTTCCATCCTGGGTCTGGGGGGGGG
AATCATCATTGTGCCGGCCCTTACCCTGTTGTTCGATGTGCCGATGCGCTCCGCAGTGGCCGCCTCGACCGTGTCCATCA
TTGCCACCTCGACCGGTGCGGCAGTGGCCTATCTGCACGACCGGCTGTCCAACGTGAGGGTCGCCATGTGGCTGGAGATG
GGGACTGCTGCCGGAGCATTGAGCGGCGCCCTGGTGGCCGGCTACCTCAATCAGCGTCTGTTGTTCATCATGTTCGGTCT
TCTGCTCGCCTATTCCGGGTTCAATATGTTCAAGGCCCGAAAGCAGGAACTGCCGGGAGAGGTGACCCCCGACAGGGTGT
CACGGCGACTGGGGCTTGGCGGTTCCTACCACGACCATTCCCTGGACACTCAGGTCACCTATCAGGTTACTCGGAGCATT
CCGGGCCTGATCCTGATGTATTTTTCTGGTGCCGCGGCTGGTACGCTGGGAATCGGAGCCGGCATCTTCAAGGTGCCGGC
GATGGAGCAGGTGATGCGCATGCCGTTCAAAGCTTCGACCGCTACCTCAAACTTCATGATCGGGGTAACGGCGGCCTCCG
GCGCGGTGGTCTACTTTGCCCGCGGTGACGTGAACCCGCTGATTGCCGGTCCCGTCGTGCTGGGAGTCCTGCTGGGGGCG
CTGGTGGGAGCCAGGCTGATGGTACGGATGAATACGAAAACCATTCGCAAGCTGTTTATCCCGTTGATTGCCTACACTGC
CATCATGATGGTGTACAGGGGGATCTGGAAATGA

Upstream 100 bases:

>100_bases
TCTACGGTGCCGCGAGTCGTCCGCTGGTTTGGTTCAGAACGCTCTATCGCTCTGATCGCTATGAATACGAAGTAGAACTT
AAGAGAGGTCGTTCACAGGC

Downstream 100 bases:

>100_bases
TGGCTGCTGGACGGAACGAGAAGACCACCGGGGAACCGATTGAAATAGTTCTGGCCCGCTTGCTGCGTATCGGTACCGTC
ATCGCCGCCGCCTTGCTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Conserved Domain Protein

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MITTTLEIFLIAIAAGVVGSILGLGGGIIIVPALTLLFDVPMRSAVAASTVSIIATSTGAAVAYLHDRLSNVRVAMWLEM
GTAAGALSGALVAGYLNQRLLFIMFGLLLAYSGFNMFKARKQELPGEVTPDRVSRRLGLGGSYHDHSLDTQVTYQVTRSI
PGLILMYFSGAAAGTLGIGAGIFKVPAMEQVMRMPFKASTATSNFMIGVTAASGAVVYFARGDVNPLIAGPVVLGVLLGA
LVGARLMVRMNTKTIRKLFIPLIAYTAIMMVYRGIWK

Sequences:

>Translated_277_residues
MITTTLEIFLIAIAAGVVGSILGLGGGIIIVPALTLLFDVPMRSAVAASTVSIIATSTGAAVAYLHDRLSNVRVAMWLEM
GTAAGALSGALVAGYLNQRLLFIMFGLLLAYSGFNMFKARKQELPGEVTPDRVSRRLGLGGSYHDHSLDTQVTYQVTRSI
PGLILMYFSGAAAGTLGIGAGIFKVPAMEQVMRMPFKASTATSNFMIGVTAASGAVVYFARGDVNPLIAGPVVLGVLLGA
LVGARLMVRMNTKTIRKLFIPLIAYTAIMMVYRGIWK
>Mature_277_residues
MITTTLEIFLIAIAAGVVGSILGLGGGIIIVPALTLLFDVPMRSAVAASTVSIIATSTGAAVAYLHDRLSNVRVAMWLEM
GTAAGALSGALVAGYLNQRLLFIMFGLLLAYSGFNMFKARKQELPGEVTPDRVSRRLGLGGSYHDHSLDTQVTYQVTRSI
PGLILMYFSGAAAGTLGIGAGIFKVPAMEQVMRMPFKASTATSNFMIGVTAASGAVVYFARGDVNPLIAGPVVLGVLLGA
LVGARLMVRMNTKTIRKLFIPLIAYTAIMMVYRGIWK

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29249; Mature: 29249

Theoretical pI: Translated: 10.63; Mature: 10.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITTTLEIFLIAIAAGVVGSILGLGGGIIIVPALTLLFDVPMRSAVAASTVSIIATSTGA
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHEEEECCCH
AVAYLHDRLSNVRVAMWLEMGTAAGALSGALVAGYLNQRLLFIMFGLLLAYSGFNMFKAR
HHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
KQELPGEVTPDRVSRRLGLGGSYHDHSLDTQVTYQVTRSIPGLILMYFSGAAAGTLGIGA
HHHCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCCHHHHCC
GIFKVPAMEQVMRMPFKASTATSNFMIGVTAASGAVVYFARGDVNPLIAGPVVLGVLLGA
CHHHCHHHHHHHHCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHH
LVGARLMVRMNTKTIRKLFIPLIAYTAIMMVYRGIWK
HHHHHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MITTTLEIFLIAIAAGVVGSILGLGGGIIIVPALTLLFDVPMRSAVAASTVSIIATSTGA
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHEEEECCCH
AVAYLHDRLSNVRVAMWLEMGTAAGALSGALVAGYLNQRLLFIMFGLLLAYSGFNMFKAR
HHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
KQELPGEVTPDRVSRRLGLGGSYHDHSLDTQVTYQVTRSIPGLILMYFSGAAAGTLGIGA
HHHCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCCHHHHCC
GIFKVPAMEQVMRMPFKASTATSNFMIGVTAASGAVVYFARGDVNPLIAGPVVLGVLLGA
CHHHCHHHHHHHHCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHH
LVGARLMVRMNTKTIRKLFIPLIAYTAIMMVYRGIWK
HHHHHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA