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The map label for this gene is ybbM [C]

Identifier: 118579506

GI number: 118579506

Start: 1124967

End: 1125758

Strand: Reverse

Name: ybbM [C]

Synonym: Ppro_1073

Alternate gene names: 118579506

Gene position: 1125758-1124967 (Counterclockwise)

Preceding gene: 118579507

Following gene: 118579505

Centisome position: 28.09

GC content: 66.04

Gene sequence:

>792_bases
ATGGAAAGCACAGGCATGGTCAACCTGGGATTGATGGACCTGGTTTTGGTCTACGGGCTGGTGCTGCTGGCCATTGCCCT
GGCGCGGCTGCGCAACATCGGCCAGGAGTGGCAGATGTTCTGGGCCTCCCTGCGCATGGTGATCCAACTCTTCGCCGTCG
GCGCCCTGCTGCACCTGGTATTCAGCGTCAGGAGCCCCCTGGCCACCCTGGCCATCCTGCTGGTGATGGGGCTCTGCACC
CTGCAGGTGGTGGGGGGGCGCATGGAACGGAAGATGCCCCGCTTCTACCGGGTGATGGCTACCGCGCTGCTGACGGGGTG
TGGGGGAGCAACCTTCGTGCTCTGCGGCCTGGCGCTGGACTATACCCCCTGGTACGATCCCCGCTACCTGATACCGCTGG
CCGGCATGATCATCGGAAACTCCATGAACGGCGCCACCCTAGCCGCGGAGCGGCTAGCATCGGGCATCCACGAGCGGCGC
GAGGAGCTGGAGGCGGCCATCTGCCTGGGCGCCACCTCCCGCCAGGCAGCGGAGCCGATCGTGCGCCAGGCATTCCGGGC
GGCGCTGATGCCGACCATCAACACCATGGCCGCCATGGGGATCGTCTCGCTCCCCGGCATGATGACCGGCCAGATCCTCT
CCGGCACCGATCCGATCGTTGCCGTGCGCTACCAGATCGCCATCATGTGCGCCATAACCGGCGCGGTGGGCATCAGCTCC
TACCTGATCCTGCTCCTGGGATACCGCCACTACTTCACCCCAGCCCACCAGGTGCGGGGTGAGGAGTCGTAA

Upstream 100 bases:

>100_bases
ATCAGGGAGGAGGGGGAACCGGCCGAGCTGTTCTCCACCCCGCGCAGCGAAGAGTTGCGCCGGTTCCTGGGCAAGCCTGA
AAGGGAAGGAAGCCACTGAC

Downstream 100 bases:

>100_bases
CCTTCCGCTGCGGAACACAACGGATTCCCCACTCGTGCATCCGCATATTGTCGATTTTTTTATCACTCAAACTACATTGA
ACAGCTGATGTCCATCGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MESTGMVNLGLMDLVLVYGLVLLAIALARLRNIGQEWQMFWASLRMVIQLFAVGALLHLVFSVRSPLATLAILLVMGLCT
LQVVGGRMERKMPRFYRVMATALLTGCGGATFVLCGLALDYTPWYDPRYLIPLAGMIIGNSMNGATLAAERLASGIHERR
EELEAAICLGATSRQAAEPIVRQAFRAALMPTINTMAAMGIVSLPGMMTGQILSGTDPIVAVRYQIAIMCAITGAVGISS
YLILLLGYRHYFTPAHQVRGEES

Sequences:

>Translated_263_residues
MESTGMVNLGLMDLVLVYGLVLLAIALARLRNIGQEWQMFWASLRMVIQLFAVGALLHLVFSVRSPLATLAILLVMGLCT
LQVVGGRMERKMPRFYRVMATALLTGCGGATFVLCGLALDYTPWYDPRYLIPLAGMIIGNSMNGATLAAERLASGIHERR
EELEAAICLGATSRQAAEPIVRQAFRAALMPTINTMAAMGIVSLPGMMTGQILSGTDPIVAVRYQIAIMCAITGAVGISS
YLILLLGYRHYFTPAHQVRGEES
>Mature_263_residues
MESTGMVNLGLMDLVLVYGLVLLAIALARLRNIGQEWQMFWASLRMVIQLFAVGALLHLVFSVRSPLATLAILLVMGLCT
LQVVGGRMERKMPRFYRVMATALLTGCGGATFVLCGLALDYTPWYDPRYLIPLAGMIIGNSMNGATLAAERLASGIHERR
EELEAAICLGATSRQAAEPIVRQAFRAALMPTINTMAAMGIVSLPGMMTGQILSGTDPIVAVRYQIAIMCAITGAVGISS
YLILLLGYRHYFTPAHQVRGEES

Specific function: Unknown

COG id: COG0390

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0014 family [H]

Homologues:

Organism=Escherichia coli, GI87081746, Length=251, Percent_Identity=30.6772908366534, Blast_Score=135, Evalue=4e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005226 [H]

Pfam domain/function: PF03649 UPF0014 [H]

EC number: NA

Molecular weight: Translated: 28482; Mature: 28482

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
8.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESTGMVNLGLMDLVLVYGLVLLAIALARLRNIGQEWQMFWASLRMVIQLFAVGALLHLV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FSVRSPLATLAILLVMGLCTLQVVGGRMERKMPRFYRVMATALLTGCGGATFVLCGLALD
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
YTPWYDPRYLIPLAGMIIGNSMNGATLAAERLASGIHERREELEAAICLGATSRQAAEPI
CCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
VRQAFRAALMPTINTMAAMGIVSLPGMMTGQILSGTDPIVAVRYQIAIMCAITGAVGISS
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
YLILLLGYRHYFTPAHQVRGEES
HHHHHHHHHHHCCCHHHCCCCCC
>Mature Secondary Structure
MESTGMVNLGLMDLVLVYGLVLLAIALARLRNIGQEWQMFWASLRMVIQLFAVGALLHLV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FSVRSPLATLAILLVMGLCTLQVVGGRMERKMPRFYRVMATALLTGCGGATFVLCGLALD
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
YTPWYDPRYLIPLAGMIIGNSMNGATLAAERLASGIHERREELEAAICLGATSRQAAEPI
CCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
VRQAFRAALMPTINTMAAMGIVSLPGMMTGQILSGTDPIVAVRYQIAIMCAITGAVGISS
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
YLILLLGYRHYFTPAHQVRGEES
HHHHHHHHHHHCCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]