Definition Pelobacter propionicus DSM 2379 chromosome, complete genome.
Accession NC_008609
Length 4,008,000

Click here to switch to the map view.

The map label for this gene is 118579446

Identifier: 118579446

GI number: 118579446

Start: 1060964

End: 1061209

Strand: Direct

Name: 118579446

Synonym: Ppro_1011

Alternate gene names: NA

Gene position: 1060964-1061209 (Clockwise)

Preceding gene: 118579445

Following gene: 118579448

Centisome position: 26.47

GC content: 49.59

Gene sequence:

>246_bases
ATGAACAAAGACGATAACGCGATTGTCCTCTATCAGGCTCCTGACGGGTCATCTTCCCTTCTGGTCCATCTCGACCATGA
CACCGTCTGGCTGACCCAGCTTCAAGTCGCTGAATTTTTTGGCGTGAATGTTCCTGCGGTATCAAAGCGTATCAGGAATA
TTCTGGGCAGCGGAGAGCTGGATGCATCTGCAACTGTTTCCAAAATGAAAAGAGTTCAGCTTGAAGGTGGGCGGAAGGTC
AACTAG

Upstream 100 bases:

>100_bases
TTTTACTCTCGGAACTTGAATGTGCTGTTTAACTTTTCCCGGCGGCGGGCGTGCCGCTGGGGCAGACCAGCAGCATCGCT
GGATTTTGTGAGGGTACAGC

Downstream 100 bases:

>100_bases
AACAACTGAGTGAACGCAACTGGCTGCGACATGACCAATTTCACCGCCTCCCTCAATCCCTTCTTCTCCCTCGCCTGCGA
ACCGGTCTGGGAGCAGATCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 81; Mature: 81

Protein sequence:

>81_residues
MNKDDNAIVLYQAPDGSSSLLVHLDHDTVWLTQLQVAEFFGVNVPAVSKRIRNILGSGELDASATVSKMKRVQLEGGRKV
N

Sequences:

>Translated_81_residues
MNKDDNAIVLYQAPDGSSSLLVHLDHDTVWLTQLQVAEFFGVNVPAVSKRIRNILGSGELDASATVSKMKRVQLEGGRKV
N
>Mature_81_residues
MNKDDNAIVLYQAPDGSSSLLVHLDHDTVWLTQLQVAEFFGVNVPAVSKRIRNILGSGELDASATVSKMKRVQLEGGRKV
N

Specific function: Unknown

COG id: COG3943

COG function: function code R; Virulence protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8850; Mature: 8850

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKDDNAIVLYQAPDGSSSLLVHLDHDTVWLTQLQVAEFFGVNVPAVSKRIRNILGSGEL
CCCCCCEEEEEECCCCCCEEEEEECCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHCCCCC
DASATVSKMKRVQLEGGRKVN
CCHHHHHHHHHEECCCCEECC
>Mature Secondary Structure
MNKDDNAIVLYQAPDGSSSLLVHLDHDTVWLTQLQVAEFFGVNVPAVSKRIRNILGSGEL
CCCCCCEEEEEECCCCCCEEEEEECCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHCCCCC
DASATVSKMKRVQLEGGRKVN
CCHHHHHHHHHEECCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA