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The map label for this gene is 118579438

Identifier: 118579438

GI number: 118579438

Start: 1054236

End: 1055270

Strand: Direct

Name: 118579438

Synonym: Ppro_1003

Alternate gene names: NA

Gene position: 1054236-1055270 (Clockwise)

Preceding gene: 118579437

Following gene: 118579439

Centisome position: 26.3

GC content: 54.01

Gene sequence:

>1035_bases
ATGCTGATCAAACAGAAGGACGGTCGTCAGGAGGACGTCCGGGAACTCAACCGTCTGCTCACCTTGAACATTACGGCCAA
GCAGCGTTTCGCCATCGAACGGGAACTGAAGTGTCTGGCCTCCGGCGACAGAAATGAGCAGAATTCCGCCTATTACCTGG
ATTTCAGCTACAAAGACTCGCAACACTGGGCAGTGATTCACGACCTTCGCATTGAGCACAGGGGTAGGGTGGCGCAGATT
GACCACCTGATCATCAACCGTTTTCTGGATGTGTACGTCCTAGAGTCCAAGAACTACTACTATGGCGTGAAGATTACTGA
CGAGGGGGAATTTCTCGTCTGGGACGGTAAGGGGTATCAAGCCATAGAATCACCGTACGAGCAGAATCAGCGGCATATAC
TGGCGTTGCAGCAGGCGGTTGCCGATAGAAATCTTGCGCCAAAACGGCTTGGCTTTGCCATACCGCTCAACTTCCGTAAC
GTTATACTGGTTGCTCCAACCTCAAAACTCATAAAACCGCCATCGGCCACGTTCGATCTCTCTGCGGTGATCAAGGCGGA
TGCCTTCGTTTCCGTGGCAGCAAAAAACGTGGAGAAAAAATCCATCATCGAAGCGCCAAAGATCATTGGGAGCGATACCC
TGCGCGAGTTCGCCGAGAAGCTGGCGCGTCTCCATCGCCCCGGCTCAATCGATTATGCTGCCAAGTTCGGTATTAAAGAG
GTAAGCATGGCGCAAGCCGTTACCGTGGCTCCGGTGGTTGCCATGCCGGAGGCCCCACCCTATGCGCCGGTTCCCGCAAT
GGTGGAAAAGAAGGCTGCCAAGCCCCTTTGCAAAGCATGCCGGAGCGAGAACCTTGCCATTGTCTACGGCAAATTCGGCT
ACTACTTCAAATGCGGAGAGTGCAGCGGGAATACTCCCATACGAATCGGCTGCGGCAAGGATGGTCACAGCGAGCGGATA
CGCAAGGAGGGGAACAACTTCTACCGTGAATGCTCGGAGTGCGGGACCAGTTCTCTCTATCACACGAACCCATAA

Upstream 100 bases:

>100_bases
CCCGGGGACCGGGAACTCTGGCCCTCAAGACAGTACCTCGCCCAGCACCGCCGGGAGTGGCGGCTGTAGGGGGAAATTAT
CCATCAGAAAAGAGGAAGTT

Downstream 100 bases:

>100_bases
AGATCGTGATCTATGGCGCCTTGTCCCTTCTGTAATATTGACCATTCCCGTATCATGATAGCCAACGACCATGCCTTGGC
CATTATGGACGGCTTTCCTC

Product: NERD domain-containing protein

Products: NA

Alternate protein names: NERD Domain Protein

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MLIKQKDGRQEDVRELNRLLTLNITAKQRFAIERELKCLASGDRNEQNSAYYLDFSYKDSQHWAVIHDLRIEHRGRVAQI
DHLIINRFLDVYVLESKNYYYGVKITDEGEFLVWDGKGYQAIESPYEQNQRHILALQQAVADRNLAPKRLGFAIPLNFRN
VILVAPTSKLIKPPSATFDLSAVIKADAFVSVAAKNVEKKSIIEAPKIIGSDTLREFAEKLARLHRPGSIDYAAKFGIKE
VSMAQAVTVAPVVAMPEAPPYAPVPAMVEKKAAKPLCKACRSENLAIVYGKFGYYFKCGECSGNTPIRIGCGKDGHSERI
RKEGNNFYRECSECGTSSLYHTNP

Sequences:

>Translated_344_residues
MLIKQKDGRQEDVRELNRLLTLNITAKQRFAIERELKCLASGDRNEQNSAYYLDFSYKDSQHWAVIHDLRIEHRGRVAQI
DHLIINRFLDVYVLESKNYYYGVKITDEGEFLVWDGKGYQAIESPYEQNQRHILALQQAVADRNLAPKRLGFAIPLNFRN
VILVAPTSKLIKPPSATFDLSAVIKADAFVSVAAKNVEKKSIIEAPKIIGSDTLREFAEKLARLHRPGSIDYAAKFGIKE
VSMAQAVTVAPVVAMPEAPPYAPVPAMVEKKAAKPLCKACRSENLAIVYGKFGYYFKCGECSGNTPIRIGCGKDGHSERI
RKEGNNFYRECSECGTSSLYHTNP
>Mature_344_residues
MLIKQKDGRQEDVRELNRLLTLNITAKQRFAIERELKCLASGDRNEQNSAYYLDFSYKDSQHWAVIHDLRIEHRGRVAQI
DHLIINRFLDVYVLESKNYYYGVKITDEGEFLVWDGKGYQAIESPYEQNQRHILALQQAVADRNLAPKRLGFAIPLNFRN
VILVAPTSKLIKPPSATFDLSAVIKADAFVSVAAKNVEKKSIIEAPKIIGSDTLREFAEKLARLHRPGSIDYAAKFGIKE
VSMAQAVTVAPVVAMPEAPPYAPVPAMVEKKAAKPLCKACRSENLAIVYGKFGYYFKCGECSGNTPIRIGCGKDGHSERI
RKEGNNFYRECSECGTSSLYHTNP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38660; Mature: 38660

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: PS50965 NERD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIKQKDGRQEDVRELNRLLTLNITAKQRFAIERELKCLASGDRNEQNSAYYLDFSYKDS
CCCCCCCCCHHHHHHHHCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCC
QHWAVIHDLRIEHRGRVAQIDHLIINRFLDVYVLESKNYYYGVKITDEGEFLVWDGKGYQ
CCEEEEEEEEHHCCCCHHHHHHHHHHHHHEEEEEECCCEEEEEEEECCCCEEEECCCCCH
AIESPYEQNQRHILALQQAVADRNLAPKRLGFAIPLNFRNVILVAPTSKLIKPPSATFDL
HHCCHHHHCCHHHHHHHHHHHCCCCCHHHCCEEEEECCCCEEEECCCHHHCCCCCCCEEH
SAVIKADAFVSVAAKNVEKKSIIEAPKIIGSDTLREFAEKLARLHRPGSIDYAAKFGIKE
HHHHHHHHHHHHHHHCCHHHHHHHCCHHCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCHH
VSMAQAVTVAPVVAMPEAPPYAPVPAMVEKKAAKPLCKACRSENLAIVYGKFGYYFKCGE
HHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHCCHHHHHHCCCCEEEEEECCCCEEEECC
CSGNTPIRIGCGKDGHSERIRKEGNNFYRECSECGTSSLYHTNP
CCCCCCEEEECCCCCCHHHHHHCCCHHHHHHHHHCCCCCEECCC
>Mature Secondary Structure
MLIKQKDGRQEDVRELNRLLTLNITAKQRFAIERELKCLASGDRNEQNSAYYLDFSYKDS
CCCCCCCCCHHHHHHHHCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCC
QHWAVIHDLRIEHRGRVAQIDHLIINRFLDVYVLESKNYYYGVKITDEGEFLVWDGKGYQ
CCEEEEEEEEHHCCCCHHHHHHHHHHHHHEEEEEECCCEEEEEEEECCCCEEEECCCCCH
AIESPYEQNQRHILALQQAVADRNLAPKRLGFAIPLNFRNVILVAPTSKLIKPPSATFDL
HHCCHHHHCCHHHHHHHHHHHCCCCCHHHCCEEEEECCCCEEEECCCHHHCCCCCCCEEH
SAVIKADAFVSVAAKNVEKKSIIEAPKIIGSDTLREFAEKLARLHRPGSIDYAAKFGIKE
HHHHHHHHHHHHHHHCCHHHHHHHCCHHCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCHH
VSMAQAVTVAPVVAMPEAPPYAPVPAMVEKKAAKPLCKACRSENLAIVYGKFGYYFKCGE
HHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHCCHHHHHHCCCCEEEEEECCCCEEEECC
CSGNTPIRIGCGKDGHSERIRKEGNNFYRECSECGTSSLYHTNP
CCCCCCEEEECCCCCCHHHHHHCCCHHHHHHHHHCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA