Click here to switch to the map view.

The map label for this gene is 118579398

Identifier: 118579398

GI number: 118579398

Start: 1004494

End: 1005096

Strand: Direct

Name: 118579398

Synonym: Ppro_0962

Alternate gene names: NA

Gene position: 1004494-1005096 (Clockwise)

Preceding gene: 118579397

Following gene: 118579399

Centisome position: 25.06

GC content: 61.53

Gene sequence:

>603_bases
ATGGTCCGTCAGGGTGGTCAGGAAAAACCGCAGCGCAGCTGTCTCGGCTGCCGCGAGACCCGTGACAGGGACCGCCTGAT
CCGTTTCGTGCTCTCCCCGCAAGGGGAAGTGCTGCCCGATCTGGATGCGCGCCTTCCCGGGAGGGGGGCGTACACCTGTG
CCAGTTCCCGTTGTCTCGAAGCAGCAATCAGGCAGCGTCTCTTCAATCGGGCCTTCAAGCGCGAAGTTTCGGCGATGCAG
CCCCAGGCCATGACGGAGATGGTGGCTCGGCTGATGCGCGAGCGGATTCTGGGCTATCTGGGGCTGGCTAACCGGGCCGG
CAAGATCGTCTCGGGAAGTTCCCTGGTCTGCGACGCTGTGCGTGGCAAAATAAAGCCGGGGCTGGTTCTGGTGGCCGAAG
ACGTATCAGGGAGTATCGGCGAAAAAGTAGTGTCCTTGTCCACCGTTCACGGAATCCCCTGTGAGCGGGTACTGACGAAG
GAAGAGTTTGGCGACATACTCGGCAAGGCGCCGCGCAGCGCGGTCGCCGTCAGGCAGGGCGGCTTCATTGCGCGACTTGT
CACTGAAATACAACGATTAAGAAACTTCCTGGGGGAGGTGTAG

Upstream 100 bases:

>100_bases
GGCTGACGAACAGGATGCCGTCGAAACCGATGCCGTTGAAACCGTTGAAACCGTTGAAACCGCGCCCGAAGCGGAAGAGA
CGGTGGAGTAACGGGGCGCT

Downstream 100 bases:

>100_bases
GGCATATGTCTAAAATTCGTGTGAGTAACCTGGCCGAGAAGCTGGGACTGGAGCATAAGGAGGTACTTGCCCGACTCAAG
GAGATAGGGGTTGACGCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MVRQGGQEKPQRSCLGCRETRDRDRLIRFVLSPQGEVLPDLDARLPGRGAYTCASSRCLEAAIRQRLFNRAFKREVSAMQ
PQAMTEMVARLMRERILGYLGLANRAGKIVSGSSLVCDAVRGKIKPGLVLVAEDVSGSIGEKVVSLSTVHGIPCERVLTK
EEFGDILGKAPRSAVAVRQGGFIARLVTEIQRLRNFLGEV

Sequences:

>Translated_200_residues
MVRQGGQEKPQRSCLGCRETRDRDRLIRFVLSPQGEVLPDLDARLPGRGAYTCASSRCLEAAIRQRLFNRAFKREVSAMQ
PQAMTEMVARLMRERILGYLGLANRAGKIVSGSSLVCDAVRGKIKPGLVLVAEDVSGSIGEKVVSLSTVHGIPCERVLTK
EEFGDILGKAPRSAVAVRQGGFIARLVTEIQRLRNFLGEV
>Mature_200_residues
MVRQGGQEKPQRSCLGCRETRDRDRLIRFVLSPQGEVLPDLDARLPGRGAYTCASSRCLEAAIRQRLFNRAFKREVSAMQ
PQAMTEMVARLMRERILGYLGLANRAGKIVSGSSLVCDAVRGKIKPGLVLVAEDVSGSIGEKVVSLSTVHGIPCERVLTK
EEFGDILGKAPRSAVAVRQGGFIARLVTEIQRLRNFLGEV

Specific function: Unknown

COG id: COG2740

COG function: function code K; Predicted nucleic-acid-binding protein implicated in transcription termination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21935; Mature: 21935

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRQGGQEKPQRSCLGCRETRDRDRLIRFVLSPQGEVLPDLDARLPGRGAYTCASSRCLE
CCCCCCCCCHHHHHHCCHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
AAIRQRLFNRAFKREVSAMQPQAMTEMVARLMRERILGYLGLANRAGKIVSGSSLVCDAV
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHH
RGKIKPGLVLVAEDVSGSIGEKVVSLSTVHGIPCERVLTKEEFGDILGKAPRSAVAVRQG
HCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCC
GFIARLVTEIQRLRNFLGEV
CHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVRQGGQEKPQRSCLGCRETRDRDRLIRFVLSPQGEVLPDLDARLPGRGAYTCASSRCLE
CCCCCCCCCHHHHHHCCHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
AAIRQRLFNRAFKREVSAMQPQAMTEMVARLMRERILGYLGLANRAGKIVSGSSLVCDAV
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHH
RGKIKPGLVLVAEDVSGSIGEKVVSLSTVHGIPCERVLTKEEFGDILGKAPRSAVAVRQG
HCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCC
GFIARLVTEIQRLRNFLGEV
CHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA