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The map label for this gene is 118579357

Identifier: 118579357

GI number: 118579357

Start: 971147

End: 972502

Strand: Direct

Name: 118579357

Synonym: Ppro_0920

Alternate gene names: NA

Gene position: 971147-972502 (Clockwise)

Preceding gene: 118579356

Following gene: 118579358

Centisome position: 24.23

GC content: 62.32

Gene sequence:

>1356_bases
ATGATTTCGGCAAATGTGACGCTCTACCCCTATCCCGTCTACCCCCTGGGCATGAGCATGGTGGCGGCGGCCCTCAGCGG
GGCGGGACACGAGGTCCAGCAGCTGGATTACCTGCAACAGGAGCGCTCCCTGGAGTCCGTGCTTGAGGAAGTGAAACGTT
TTCAGCCCGGCATGATCGGCATCTCGGTGCGCAACATCGACAACGTGAACCTGCTGAACACCGAGTACTACATCCATAAC
GTCAAAAACATGGTGGATGCCATCAGGACGGTGAGCGATGCCCGCATCGTGCTGGGCGGAGCCGGCTTCTCCCTGATCCC
TGAGCAGATCCTGGAGGAAACCGGCGCCGATTTCGGCGTGATCGGCGAGGGCGAGCAGCTAATGGTTGCGTTCGCCGACG
GCGCGGAGCGGGGAATCTACCCCCAGAAACGGTTGCTGGGGCCGGCGTCGCCCCTGTCCGGCGACGATATTGGCTCGGCG
CTCTACGACGAGGGGCTGACCCGCTTCTACCTGCAGAGCGGCAACATCGCCTCGATCCAGACCAAGCGGGGCTGCAGCCA
CCACTGCGTCTACTGCACCTATCCGCTGCTGGAGGGTTCGTGCCTGCGCAGCCGCGACCCGGTGAAGGTGGTGGACGACA
TCGAACTTTTGCGCGACAAGCACGGCACCGGCTACATCTTCTTCGTGGACTCGGTGTTCAATGACGATTCGGGTATCTAC
CTGGGGGTGGTGGACGAGATGCTGCACCGCAAGGTCAACATCCCCTGGACCGGCTACATCAAGCCGGGGAACCTGAACGA
CGAGATCGTGGAGCGCATGAAGAGCACCGGATTCGCCTCCGCCGAAGTCGGCTCCGACGCGGCCTGCGACAGCACCCTGG
CTCGCATGGGCAAGGACTTCACCTTCGCCGACATCCGGGAGTGCAACGATCTGCTGACGCGGCACGGCATCGCCACCTGT
CACTTCTTCATGTTCGGCGGCCCGGGGGAGACCGAGGAGACGGTTAAGGAGGGGATCGCCAACATCTTGAGCCTGAAGAA
GTGCGTCATCTTCATCTTCATGGGTATCCGCCTGCTGCCCAACACTCCGCTGGCCAAAATCGCTGTCCGGGAAGGGGTGA
TCGACTCGGAGAGCGACATGCTGCAGCCGGTGTACTACATCGCGCCCAACCTGGACAGGGACTGGCTGGAACGGACCCTG
ACCGAGGCCTTCGCCGGGGTTCGCCACTGCCTGTTCCCCCCCGACTGCATGGACAATTGTCTGAACGTGTTGCACAAGCT
GGGCTATAGCGGTCCCATGTGGGATCTGCTCACCAAGGAAAAACCGCGCAGAAGGGGCGCCCATGCCGCGGCCTAG

Upstream 100 bases:

>100_bases
GGAAAAGGAGAAGGCAGATGGAACATATCGCCATACCAGCCCCCGGCGCAGGAAGTGGGAGCGGAACGTGGAACGGGAGA
TTGTATAGGTGAAGGTGTTG

Downstream 100 bases:

>100_bases
CCCGCTTCCGGCAGAGAAGCTCTGGTGCGCGGTGCCGGTGTACAACAACCGGGAGACCCTGCGGCGGGTGGTGGAGGGGT
GCCGCGCCATCCTGGACAAC

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 451; Mature: 451

Protein sequence:

>451_residues
MISANVTLYPYPVYPLGMSMVAAALSGAGHEVQQLDYLQQERSLESVLEEVKRFQPGMIGISVRNIDNVNLLNTEYYIHN
VKNMVDAIRTVSDARIVLGGAGFSLIPEQILEETGADFGVIGEGEQLMVAFADGAERGIYPQKRLLGPASPLSGDDIGSA
LYDEGLTRFYLQSGNIASIQTKRGCSHHCVYCTYPLLEGSCLRSRDPVKVVDDIELLRDKHGTGYIFFVDSVFNDDSGIY
LGVVDEMLHRKVNIPWTGYIKPGNLNDEIVERMKSTGFASAEVGSDAACDSTLARMGKDFTFADIRECNDLLTRHGIATC
HFFMFGGPGETEETVKEGIANILSLKKCVIFIFMGIRLLPNTPLAKIAVREGVIDSESDMLQPVYYIAPNLDRDWLERTL
TEAFAGVRHCLFPPDCMDNCLNVLHKLGYSGPMWDLLTKEKPRRRGAHAAA

Sequences:

>Translated_451_residues
MISANVTLYPYPVYPLGMSMVAAALSGAGHEVQQLDYLQQERSLESVLEEVKRFQPGMIGISVRNIDNVNLLNTEYYIHN
VKNMVDAIRTVSDARIVLGGAGFSLIPEQILEETGADFGVIGEGEQLMVAFADGAERGIYPQKRLLGPASPLSGDDIGSA
LYDEGLTRFYLQSGNIASIQTKRGCSHHCVYCTYPLLEGSCLRSRDPVKVVDDIELLRDKHGTGYIFFVDSVFNDDSGIY
LGVVDEMLHRKVNIPWTGYIKPGNLNDEIVERMKSTGFASAEVGSDAACDSTLARMGKDFTFADIRECNDLLTRHGIATC
HFFMFGGPGETEETVKEGIANILSLKKCVIFIFMGIRLLPNTPLAKIAVREGVIDSESDMLQPVYYIAPNLDRDWLERTL
TEAFAGVRHCLFPPDCMDNCLNVLHKLGYSGPMWDLLTKEKPRRRGAHAAA
>Mature_451_residues
MISANVTLYPYPVYPLGMSMVAAALSGAGHEVQQLDYLQQERSLESVLEEVKRFQPGMIGISVRNIDNVNLLNTEYYIHN
VKNMVDAIRTVSDARIVLGGAGFSLIPEQILEETGADFGVIGEGEQLMVAFADGAERGIYPQKRLLGPASPLSGDDIGSA
LYDEGLTRFYLQSGNIASIQTKRGCSHHCVYCTYPLLEGSCLRSRDPVKVVDDIELLRDKHGTGYIFFVDSVFNDDSGIY
LGVVDEMLHRKVNIPWTGYIKPGNLNDEIVERMKSTGFASAEVGSDAACDSTLARMGKDFTFADIRECNDLLTRHGIATC
HFFMFGGPGETEETVKEGIANILSLKKCVIFIFMGIRLLPNTPLAKIAVREGVIDSESDMLQPVYYIAPNLDRDWLERTL
TEAFAGVRHCLFPPDCMDNCLNVLHKLGYSGPMWDLLTKEKPRRRGAHAAA

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 49823; Mature: 49823

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISANVTLYPYPVYPLGMSMVAAALSGAGHEVQQLDYLQQERSLESVLEEVKRFQPGMIG
CCCCCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
ISVRNIDNVNLLNTEYYIHNVKNMVDAIRTVSDARIVLGGAGFSLIPEQILEETGADFGV
EEEECCCCCEEEEHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCEEE
IGEGEQLMVAFADGAERGIYPQKRLLGPASPLSGDDIGSALYDEGLTRFYLQSGNIASIQ
ECCCCEEEEEEECCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCEEEEECCCEEEEE
TKRGCSHHCVYCTYPLLEGSCLRSRDPVKVVDDIELLRDKHGTGYIFFVDSVFNDDSGIY
CCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECEECCCCCEE
LGVVDEMLHRKVNIPWTGYIKPGNLNDEIVERMKSTGFASAEVGSDAACDSTLARMGKDF
EHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCC
TFADIRECNDLLTRHGIATCHFFMFGGPGETEETVKEGIANILSLKKCVIFIFMGIRLLP
CHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NTPLAKIAVREGVIDSESDMLQPVYYIAPNLDRDWLERTLTEAFAGVRHCLFPPDCMDNC
CCCHHHHHHHHCCCCCCHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LNVLHKLGYSGPMWDLLTKEKPRRRGAHAAA
HHHHHHCCCCCCCHHHHCCCCHHHCCCCCCC
>Mature Secondary Structure
MISANVTLYPYPVYPLGMSMVAAALSGAGHEVQQLDYLQQERSLESVLEEVKRFQPGMIG
CCCCCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
ISVRNIDNVNLLNTEYYIHNVKNMVDAIRTVSDARIVLGGAGFSLIPEQILEETGADFGV
EEEECCCCCEEEEHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCEEE
IGEGEQLMVAFADGAERGIYPQKRLLGPASPLSGDDIGSALYDEGLTRFYLQSGNIASIQ
ECCCCEEEEEEECCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCEEEEECCCEEEEE
TKRGCSHHCVYCTYPLLEGSCLRSRDPVKVVDDIELLRDKHGTGYIFFVDSVFNDDSGIY
CCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECEECCCCCEE
LGVVDEMLHRKVNIPWTGYIKPGNLNDEIVERMKSTGFASAEVGSDAACDSTLARMGKDF
EHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCC
TFADIRECNDLLTRHGIATCHFFMFGGPGETEETVKEGIANILSLKKCVIFIFMGIRLLP
CHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NTPLAKIAVREGVIDSESDMLQPVYYIAPNLDRDWLERTLTEAFAGVRHCLFPPDCMDNC
CCCHHHHHHHHCCCCCCHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LNVLHKLGYSGPMWDLLTKEKPRRRGAHAAA
HHHHHHCCCCCCCHHHHCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]