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The map label for this gene is 118579356

Identifier: 118579356

GI number: 118579356

Start: 969866

End: 971134

Strand: Direct

Name: 118579356

Synonym: Ppro_0919

Alternate gene names: NA

Gene position: 969866-971134 (Clockwise)

Preceding gene: 118579355

Following gene: 118579357

Centisome position: 24.2

GC content: 60.6

Gene sequence:

>1269_bases
GTGAAGATAAAATTGATCTATCCCAAATGGCCCAAGCTGGACCGGCAGACCGACTTCAACCTGCCGCCCCATGGCCCGGT
CTGTTTCGCGGCCACGGTTCCGGCGGACGTGGACTTGAGCTTTACCGACGAGCATGTGGAGCCGATCGATTTCGACGAGC
ATGCTGACCTGGTGGCCATCTCCTGCATGCTGACCTGCCAGATGCCCCGCGGCTGGGAGATCGCCGACATCTACCGTGCC
AAGGGGATCCCGGTGATCTTCGGTGGTATCGGCACCATGCTGCATGCCCAGGAGACCATGACCCACGCCGATTCCGTCTT
TCTGGGCGAGGCCGAGGGACGTTTCCATCAGGTGCTGACCGACCTGAACAACGGGGGGATGCAGAAGGTCTACGATTACC
AGAACGACCTCCCCGACATCGGCCTGGTCGGTCCGGCGCGGCGGGAGATCCTCAACCGTGAACTGTACAACTACCGGGGC
ATGCAGATGGTGGACCTGGTGCACGCCTCCCGCGGTTGCCGCTTCACCTGCTTCCCCTGCTGCACGCCGTTTTTGGGGGG
GACCAGATTCCGGCCGCGCTCCCTGGACGACGTCATCGCCGAGGTGGCTTCAATAGAGAACAACCGCCTGTTCTTCGTGG
ATAACTCCATGTCCCAGGACGACCAGTGGGAAAAGGATCTGTTCAAGGCCCTGATTCCGCTCAAGAAGAAGTGGGTTTGC
CACCCGATCAAGGACAACGACGAGATCCTGGACCTGGCCGCCGAAGCCGGCTGCTGGTACGTCTACCAGGCCATCTTCGA
CACCTCCGACCATATCCGCAACCGGGTCAAGCGCCTGCAGGAGCGGGGCATCGGCGTGGAGGGGACCATCATCCTGGGCA
CCGACGAGCAGGACGAGGAGTACATCAAGCGGCTGGTGGATTTCCTGCTGGAGATCAACCTGGATCTGGCGGAGTTCACC
ATCCTGACCCCCTTCCCGCATACGCCGATCCGCGAGACCCTGGAAAAGGAGGGGCGCATCCTCTCCAACGACTGGCTGCG
CTACACCGGCGGAGAAGTGGTCTTCCAGCCGGCGCGCATGACCCCGTCGAAACTTCAGGATCTCTATTATTACGCCTGGG
ACCGCTTCTACAGCGACAGCAGCCAGAATCTGAAGATGGCCAAGCTGTTTCTCAAGGTGATGGAAAAGGAGAAGGCAGAT
GGAACATATCGCCATACCAGCCCCCGGCGCAGGAAGTGGGAGCGGAACGTGGAACGGGAGATTGTATAG

Upstream 100 bases:

>100_bases
TCTGCTCCCTGGCCGAGGCGCGGGCAATCGTCGATTCAGTACCTGATGTGGCTGGCATGGTGCAGGAACTATTACTCGTG
AAGGATACAGAGGGCGAACC

Downstream 100 bases:

>100_bases
GTGAAGGTGTTGATGATTTCGGCAAATGTGACGCTCTACCCCTATCCCGTCTACCCCCTGGGCATGAGCATGGTGGCGGC
GGCCCTCAGCGGGGCGGGAC

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MKIKLIYPKWPKLDRQTDFNLPPHGPVCFAATVPADVDLSFTDEHVEPIDFDEHADLVAISCMLTCQMPRGWEIADIYRA
KGIPVIFGGIGTMLHAQETMTHADSVFLGEAEGRFHQVLTDLNNGGMQKVYDYQNDLPDIGLVGPARREILNRELYNYRG
MQMVDLVHASRGCRFTCFPCCTPFLGGTRFRPRSLDDVIAEVASIENNRLFFVDNSMSQDDQWEKDLFKALIPLKKKWVC
HPIKDNDEILDLAAEAGCWYVYQAIFDTSDHIRNRVKRLQERGIGVEGTIILGTDEQDEEYIKRLVDFLLEINLDLAEFT
ILTPFPHTPIRETLEKEGRILSNDWLRYTGGEVVFQPARMTPSKLQDLYYYAWDRFYSDSSQNLKMAKLFLKVMEKEKAD
GTYRHTSPRRRKWERNVEREIV

Sequences:

>Translated_422_residues
MKIKLIYPKWPKLDRQTDFNLPPHGPVCFAATVPADVDLSFTDEHVEPIDFDEHADLVAISCMLTCQMPRGWEIADIYRA
KGIPVIFGGIGTMLHAQETMTHADSVFLGEAEGRFHQVLTDLNNGGMQKVYDYQNDLPDIGLVGPARREILNRELYNYRG
MQMVDLVHASRGCRFTCFPCCTPFLGGTRFRPRSLDDVIAEVASIENNRLFFVDNSMSQDDQWEKDLFKALIPLKKKWVC
HPIKDNDEILDLAAEAGCWYVYQAIFDTSDHIRNRVKRLQERGIGVEGTIILGTDEQDEEYIKRLVDFLLEINLDLAEFT
ILTPFPHTPIRETLEKEGRILSNDWLRYTGGEVVFQPARMTPSKLQDLYYYAWDRFYSDSSQNLKMAKLFLKVMEKEKAD
GTYRHTSPRRRKWERNVEREIV
>Mature_422_residues
MKIKLIYPKWPKLDRQTDFNLPPHGPVCFAATVPADVDLSFTDEHVEPIDFDEHADLVAISCMLTCQMPRGWEIADIYRA
KGIPVIFGGIGTMLHAQETMTHADSVFLGEAEGRFHQVLTDLNNGGMQKVYDYQNDLPDIGLVGPARREILNRELYNYRG
MQMVDLVHASRGCRFTCFPCCTPFLGGTRFRPRSLDDVIAEVASIENNRLFFVDNSMSQDDQWEKDLFKALIPLKKKWVC
HPIKDNDEILDLAAEAGCWYVYQAIFDTSDHIRNRVKRLQERGIGVEGTIILGTDEQDEEYIKRLVDFLLEINLDLAEFT
ILTPFPHTPIRETLEKEGRILSNDWLRYTGGEVVFQPARMTPSKLQDLYYYAWDRFYSDSSQNLKMAKLFLKVMEKEKAD
GTYRHTSPRRRKWERNVEREIV

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 48844; Mature: 48844

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKLIYPKWPKLDRQTDFNLPPHGPVCFAATVPADVDLSFTDEHVEPIDFDEHADLVAI
CEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEE
SCMLTCQMPRGWEIADIYRAKGIPVIFGGIGTMLHAQETMTHADSVFLGEAEGRFHQVLT
EEEEEECCCCCCCHHHHHHHCCCCEEECCHHHHHHHHHHHHHHCCEEEECCCCHHHHHHH
DLNNGGMQKVYDYQNDLPDIGLVGPARREILNRELYNYRGMQMVDLVHASRGCRFTCFPC
HHCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEHHH
CTPFLGGTRFRPRSLDDVIAEVASIENNRLFFVDNSMSQDDQWEKDLFKALIPLKKKWVC
CCHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCEE
HPIKDNDEILDLAAEAGCWYVYQAIFDTSDHIRNRVKRLQERGIGVEGTIILGTDEQDEE
CCCCCCHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHH
YIKRLVDFLLEINLDLAEFTILTPFPHTPIRETLEKEGRILSNDWLRYTGGEVVFQPARM
HHHHHHHHHHHCCCCHHHEEEECCCCCCHHHHHHHHCCCEECCCCEEECCCEEEEECCCC
TPSKLQDLYYYAWDRFYSDSSQNLKMAKLFLKVMEKEKADGTYRHTSPRRRKWERNVERE
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC
IV
CC
>Mature Secondary Structure
MKIKLIYPKWPKLDRQTDFNLPPHGPVCFAATVPADVDLSFTDEHVEPIDFDEHADLVAI
CEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEE
SCMLTCQMPRGWEIADIYRAKGIPVIFGGIGTMLHAQETMTHADSVFLGEAEGRFHQVLT
EEEEEECCCCCCCHHHHHHHCCCCEEECCHHHHHHHHHHHHHHCCEEEECCCCHHHHHHH
DLNNGGMQKVYDYQNDLPDIGLVGPARREILNRELYNYRGMQMVDLVHASRGCRFTCFPC
HHCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEHHH
CTPFLGGTRFRPRSLDDVIAEVASIENNRLFFVDNSMSQDDQWEKDLFKALIPLKKKWVC
CCHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCEE
HPIKDNDEILDLAAEAGCWYVYQAIFDTSDHIRNRVKRLQERGIGVEGTIILGTDEQDEE
CCCCCCHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHH
YIKRLVDFLLEINLDLAEFTILTPFPHTPIRETLEKEGRILSNDWLRYTGGEVVFQPARM
HHHHHHHHHHHCCCCHHHEEEECCCCCCHHHHHHHHCCCEECCCCEEECCCEEEEECCCC
TPSKLQDLYYYAWDRFYSDSSQNLKMAKLFLKVMEKEKADGTYRHTSPRRRKWERNVERE
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC
IV
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]