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The map label for this gene is 118579343

Identifier: 118579343

GI number: 118579343

Start: 956800

End: 958242

Strand: Direct

Name: 118579343

Synonym: Ppro_0906

Alternate gene names: NA

Gene position: 956800-958242 (Clockwise)

Preceding gene: 118579342

Following gene: 118579344

Centisome position: 23.87

GC content: 62.79

Gene sequence:

>1443_bases
ATGTCGCTTTTGCTCTCCATGGGTGGAAAGAGCGTCCTTCTGATCGAGAAAAGCCCCACCATCGGCGGTTCCCTCTCCTG
TTTCAGCCGGGGGGGGATTTCGTTCGACACCGGATTCCACTTTACAGGCGGCTTCCACCAGGGGGGGATACTCTCCGACA
TGCTGTCCCTGCTGGGCATCCGCGACATGATCGAGCCGGTCTTCCTTCCCTGCTCGGCCCAGAACCAGTTCGTCTTCGAG
TCCCACGCCAGGAGCTTCGAACATCCCTGCGGCATGGATAACATCACCAGGGCCTTCAAGGGGTATTTTCCCGCCCAGAC
GGGGGCGATCGACCGCTACTTCCAGCTGGTCCGCTCGGTTTGCCAGCGCACCCCCTCCCTCAACCTGCGTGAAAACGTGA
TCGCACCGCCGAACCTGGACGAGGACTACATCTCCCTGGACAGCGTGCTTAAAGAGCTGACCTCCGATCCCCTCCTGGCC
GGCCTGCTGTCGGGGTACGCCATGTGCTACGGGGTGCGGCCCGCCGAGGTCTCCTTTGCCAACCACGCCAGAATGGTCTC
CAGCTTCTATGAGTCCGTGGCCTTTGTGCGGCATGGCGGCGACGGCTTCATCAACGCCTTCCGTGAGGAGTTCAGGCGCC
GCACTGTGGAAATCCGCTGCTCCACCTGGATTACGGAGCTGGCCGATATCCGCGACAGCAGGGTGGGTCGCTTCGTGCTG
AGTAGCGGCGAAGAGGTCCAGGCTGACAATTGCGTCCTGACCATTCATCCCCAGGAGATCCTCAGGCTTTTGCCGGAGGG
ACACTACAGCAGGGCCTTCGCCAGTCGGATCAACGCCTTTGAGCCTTCGCTGGGGCTCTTTTCGCTGTTCGCAGTGGTCA
AGCCGGGGCAGGTCGACCCCTTTCCGGATGCGTCCATCGTGTCGCTCTTTCCCGATACCGACATGAACAGGCTGCTGGAC
CCCGCCTACCAGGGGCAGCCGGCCCTGGTCGTCGTCAAACCCCCGGCCCACGGGGGGGGGAAGGGAATCAGCATCGTGGA
ACCCTCCTTCGCCGGTCAGGTGCAGGCCTGGCAGGAGAGCCGGCGGGGGGCGCGGCCCGAGGGATACCAGGCCTACAAGC
GGGCGCGGGTGGAGGCCATCAAGGAGCATCTCTTCGGCTGCTTCCCGGAGTACCGGGACCGCCTGGATTTCCTGGATGCC
GGCTCCATGCTGACCTACAAGGAGTACCTCTGCAGCCCCGACGGCAGCGCTTATGGCGTGAAGCAGAAGATGGGCCAGTT
CAACCTGGTGGGCAAGCTCCCCCTGCACAACCTCTTCGCCGCGGGACAGAGCGCGCTCTTGCCCGGCGTGATCGGCGCCA
TGATGTCGTCACTGATCGTCGGTCGCAACCTGCTGGGAAAAGAACAGTACGGACAACTGCTGGACAGGAACCTATGTCAT
TGA

Upstream 100 bases:

>100_bases
AGCCGGAAGGGCGTCACCCATTCAGACAACGGGGAGTCGGCAGTCCAGAATGAAAAAATATGATCATATCGTAGTGGGAA
GCGGCATCAGCGGGTTGACG

Downstream 100 bases:

>100_bases
AACGAGTCGTCATAACGGGAATCGGTGTTGTTTCGCCCTTCGGAAACGGGGTGGCGGAACTGGTCAGGGGGATGGAAGAG
GGGCGCAGCGCCGTGCGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: FAD Dependent Oxidoreductase; Phytoene Dehydrogenase

Number of amino acids: Translated: 480; Mature: 479

Protein sequence:

>480_residues
MSLLLSMGGKSVLLIEKSPTIGGSLSCFSRGGISFDTGFHFTGGFHQGGILSDMLSLLGIRDMIEPVFLPCSAQNQFVFE
SHARSFEHPCGMDNITRAFKGYFPAQTGAIDRYFQLVRSVCQRTPSLNLRENVIAPPNLDEDYISLDSVLKELTSDPLLA
GLLSGYAMCYGVRPAEVSFANHARMVSSFYESVAFVRHGGDGFINAFREEFRRRTVEIRCSTWITELADIRDSRVGRFVL
SSGEEVQADNCVLTIHPQEILRLLPEGHYSRAFASRINAFEPSLGLFSLFAVVKPGQVDPFPDASIVSLFPDTDMNRLLD
PAYQGQPALVVVKPPAHGGGKGISIVEPSFAGQVQAWQESRRGARPEGYQAYKRARVEAIKEHLFGCFPEYRDRLDFLDA
GSMLTYKEYLCSPDGSAYGVKQKMGQFNLVGKLPLHNLFAAGQSALLPGVIGAMMSSLIVGRNLLGKEQYGQLLDRNLCH

Sequences:

>Translated_480_residues
MSLLLSMGGKSVLLIEKSPTIGGSLSCFSRGGISFDTGFHFTGGFHQGGILSDMLSLLGIRDMIEPVFLPCSAQNQFVFE
SHARSFEHPCGMDNITRAFKGYFPAQTGAIDRYFQLVRSVCQRTPSLNLRENVIAPPNLDEDYISLDSVLKELTSDPLLA
GLLSGYAMCYGVRPAEVSFANHARMVSSFYESVAFVRHGGDGFINAFREEFRRRTVEIRCSTWITELADIRDSRVGRFVL
SSGEEVQADNCVLTIHPQEILRLLPEGHYSRAFASRINAFEPSLGLFSLFAVVKPGQVDPFPDASIVSLFPDTDMNRLLD
PAYQGQPALVVVKPPAHGGGKGISIVEPSFAGQVQAWQESRRGARPEGYQAYKRARVEAIKEHLFGCFPEYRDRLDFLDA
GSMLTYKEYLCSPDGSAYGVKQKMGQFNLVGKLPLHNLFAAGQSALLPGVIGAMMSSLIVGRNLLGKEQYGQLLDRNLCH
>Mature_479_residues
SLLLSMGGKSVLLIEKSPTIGGSLSCFSRGGISFDTGFHFTGGFHQGGILSDMLSLLGIRDMIEPVFLPCSAQNQFVFES
HARSFEHPCGMDNITRAFKGYFPAQTGAIDRYFQLVRSVCQRTPSLNLRENVIAPPNLDEDYISLDSVLKELTSDPLLAG
LLSGYAMCYGVRPAEVSFANHARMVSSFYESVAFVRHGGDGFINAFREEFRRRTVEIRCSTWITELADIRDSRVGRFVLS
SGEEVQADNCVLTIHPQEILRLLPEGHYSRAFASRINAFEPSLGLFSLFAVVKPGQVDPFPDASIVSLFPDTDMNRLLDP
AYQGQPALVVVKPPAHGGGKGISIVEPSFAGQVQAWQESRRGARPEGYQAYKRARVEAIKEHLFGCFPEYRDRLDFLDAG
SMLTYKEYLCSPDGSAYGVKQKMGQFNLVGKLPLHNLFAAGQSALLPGVIGAMMSSLIVGRNLLGKEQYGQLLDRNLCH

Specific function: Unknown

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI203098013, Length=516, Percent_Identity=24.4186046511628, Blast_Score=118, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52875; Mature: 52744

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLLSMGGKSVLLIEKSPTIGGSLSCFSRGGISFDTGFHFTGGFHQGGILSDMLSLLGI
CCEEEECCCCEEEEEECCCCCCCCCHHHHCCCCEECCCCCCCCCCCCCCHHHHHHHHHHH
RDMIEPVFLPCSAQNQFVFESHARSFEHPCGMDNITRAFKGYFPAQTGAIDRYFQLVRSV
HHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHH
CQRTPSLNLRENVIAPPNLDEDYISLDSVLKELTSDPLLAGLLSGYAMCYGVRPAEVSFA
HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHCCHH
NHARMVSSFYESVAFVRHGGDGFINAFREEFRRRTVEIRCSTWITELADIRDSRVGRFVL
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHH
SSGEEVQADNCVLTIHPQEILRLLPEGHYSRAFASRINAFEPSLGLFSLFAVVKPGQVDP
CCCCCEECCCEEEEECHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCC
FPDASIVSLFPDTDMNRLLDPAYQGQPALVVVKPPAHGGGKGISIVEPSFAGQVQAWQES
CCCCCEEEECCCCCHHHHCCHHHCCCCEEEEECCCCCCCCCCCEEECCCCCCHHHHHHHH
RRGARPEGYQAYKRARVEAIKEHLFGCFPEYRDRLDFLDAGSMLTYKEYLCSPDGSAYGV
HCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCH
KQKMGQFNLVGKLPLHNLFAAGQSALLPGVIGAMMSSLIVGRNLLGKEQYGQLLDRNLCH
HHHCCCCCEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
SLLLSMGGKSVLLIEKSPTIGGSLSCFSRGGISFDTGFHFTGGFHQGGILSDMLSLLGI
CEEEECCCCEEEEEECCCCCCCCCHHHHCCCCEECCCCCCCCCCCCCCHHHHHHHHHHH
RDMIEPVFLPCSAQNQFVFESHARSFEHPCGMDNITRAFKGYFPAQTGAIDRYFQLVRSV
HHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHH
CQRTPSLNLRENVIAPPNLDEDYISLDSVLKELTSDPLLAGLLSGYAMCYGVRPAEVSFA
HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHCCHH
NHARMVSSFYESVAFVRHGGDGFINAFREEFRRRTVEIRCSTWITELADIRDSRVGRFVL
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHH
SSGEEVQADNCVLTIHPQEILRLLPEGHYSRAFASRINAFEPSLGLFSLFAVVKPGQVDP
CCCCCEECCCEEEEECHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCC
FPDASIVSLFPDTDMNRLLDPAYQGQPALVVVKPPAHGGGKGISIVEPSFAGQVQAWQES
CCCCCEEEECCCCCHHHHCCHHHCCCCEEEEECCCCCCCCCCCEEECCCCCCHHHHHHHH
RRGARPEGYQAYKRARVEAIKEHLFGCFPEYRDRLDFLDAGSMLTYKEYLCSPDGSAYGV
HCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCH
KQKMGQFNLVGKLPLHNLFAAGQSALLPGVIGAMMSSLIVGRNLLGKEQYGQLLDRNLCH
HHHCCCCCEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA