| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
Click here to switch to the map view.
The map label for this gene is 118579337
Identifier: 118579337
GI number: 118579337
Start: 946196
End: 947260
Strand: Reverse
Name: 118579337
Synonym: Ppro_0900
Alternate gene names: NA
Gene position: 947260-946196 (Counterclockwise)
Preceding gene: 118579338
Following gene: 118579323
Centisome position: 23.63
GC content: 62.54
Gene sequence:
>1065_bases ATGACCAACCGACCAGCCCCCAAAACGCCTTTTCTGCTCATCCTCCCGCTCCTCGCCTATGGGGCGATCCTTGTCGCCCT GACGCTGTTCAACCGGTTTGGCCCGGAGCGTTGGTGGTTCACTGCCTTCAACCTCTACCTGCCTCAGGCGATCTGGCTGA TCCCCGGACTCTTTTTTTCCATCATCTGCTTCCTGACCGCCCGACGCTGGCTCTGGTTGCCCCTGCTCTGCGTGGCCTGG GTTGCCGGTCCCCTGATGGGTTTCTGCTGGCCATGGGGCCAGGCTCACGGATCGTCCACCGCTACCCCGCTTAGGGTCAT GACCTGGAATGTCAAGTACTGTTCCCGCGGCAAACTGGCCCAACAAGCGCTTAAAGACGACATTGCGCGGGCCAACCCGG ACATCGTGCTGTTTCAGGACGCGGGAGGGGTTATGCAGGGAGCGCTGGGAAGCTACTTCGCGAAATGGCATTTCCACTCC CAGGAGCAGTTCGTGATCGCCAGTCGCTTCCCCCTCGAGGAAACGGAGATCCTGCCGATCAGCCGGCCATCCGGCAAACA AAAGACCTTCGCGCGCTACAGAGTGAAGATAGGTTCGACGCCGGTCTCCCTCTACAACATCCATTTTGAATCCCCCCGCG AGGGGCTCTCCGCCGTCGGTTCGGCGAGGAAACGCCCCTGGTACCTGCCGAAAGGGATCCAGCGCTTCGAGCGGAACGTA TCTATCCGCCTCAGCCAGGCCCGCATGGTACAGGAGTTCATCAGCCAGGAGAAGGGACCCGTTATCATCGGCGGAGACCT CAACTCACCCGACGCGTCTCAGGTGTGCGCCGGCCTGCGGGACGCCGGACTCCACGACGCGTTCGCCGAGGGGGGGCGGG GCTACGGTTACACCTATGGCCACTTCCTGCTCCAGCGCCGTCTCCCCTGGATGCGCGTCTCCTGGATGCGCATCGACCAC GTCATGATGAGCTCCCACTTCAAGGCGCTGGGCTGCCGGACCGGGACCGGAGAGGCTTCGGACCACCGACCGGTCATCGC CGACCTGCTGTTTCTGCGTAAGTAG
Upstream 100 bases:
>100_bases GAGCTTCACATACCCCGGGCCAGCACAAAGAGCGCATCGACCTCGCTGAATTCCGCGATGATGCCGATCTTCCCCTGACG CCCGGACGGGACGGCATGCC
Downstream 100 bases:
>100_bases TTCTCTTCCCCGGAATCCCGAAACCACGCCGCCGCCCTTGATCCGGCTTTCAGACACGAAAACGCCCCGTGCCCCCTCAA CAGATATGAGGGAACAGGGG
Product: endonuclease/exonuclease/phosphatase
Products: NA
Alternate protein names: Endonuclease/Exonuclease/Phosphatase Family Protein; AP Endonuclease Domain Protein
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MTNRPAPKTPFLLILPLLAYGAILVALTLFNRFGPERWWFTAFNLYLPQAIWLIPGLFFSIICFLTARRWLWLPLLCVAW VAGPLMGFCWPWGQAHGSSTATPLRVMTWNVKYCSRGKLAQQALKDDIARANPDIVLFQDAGGVMQGALGSYFAKWHFHS QEQFVIASRFPLEETEILPISRPSGKQKTFARYRVKIGSTPVSLYNIHFESPREGLSAVGSARKRPWYLPKGIQRFERNV SIRLSQARMVQEFISQEKGPVIIGGDLNSPDASQVCAGLRDAGLHDAFAEGGRGYGYTYGHFLLQRRLPWMRVSWMRIDH VMMSSHFKALGCRTGTGEASDHRPVIADLLFLRK
Sequences:
>Translated_354_residues MTNRPAPKTPFLLILPLLAYGAILVALTLFNRFGPERWWFTAFNLYLPQAIWLIPGLFFSIICFLTARRWLWLPLLCVAW VAGPLMGFCWPWGQAHGSSTATPLRVMTWNVKYCSRGKLAQQALKDDIARANPDIVLFQDAGGVMQGALGSYFAKWHFHS QEQFVIASRFPLEETEILPISRPSGKQKTFARYRVKIGSTPVSLYNIHFESPREGLSAVGSARKRPWYLPKGIQRFERNV SIRLSQARMVQEFISQEKGPVIIGGDLNSPDASQVCAGLRDAGLHDAFAEGGRGYGYTYGHFLLQRRLPWMRVSWMRIDH VMMSSHFKALGCRTGTGEASDHRPVIADLLFLRK >Mature_353_residues TNRPAPKTPFLLILPLLAYGAILVALTLFNRFGPERWWFTAFNLYLPQAIWLIPGLFFSIICFLTARRWLWLPLLCVAWV AGPLMGFCWPWGQAHGSSTATPLRVMTWNVKYCSRGKLAQQALKDDIARANPDIVLFQDAGGVMQGALGSYFAKWHFHSQ EQFVIASRFPLEETEILPISRPSGKQKTFARYRVKIGSTPVSLYNIHFESPREGLSAVGSARKRPWYLPKGIQRFERNVS IRLSQARMVQEFISQEKGPVIIGGDLNSPDASQVCAGLRDAGLHDAFAEGGRGYGYTYGHFLLQRRLPWMRVSWMRIDHV MMSSHFKALGCRTGTGEASDHRPVIADLLFLRK
Specific function: Unknown
COG id: COG3021
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40060; Mature: 39929
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNRPAPKTPFLLILPLLAYGAILVALTLFNRFGPERWWFTAFNLYLPQAIWLIPGLFFS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH IICFLTARRWLWLPLLCVAWVAGPLMGFCWPWGQAHGSSTATPLRVMTWNVKYCSRGKLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECHHHCCCHHH QQALKDDIARANPDIVLFQDAGGVMQGALGSYFAKWHFHSQEQFVIASRFPLEETEILPI HHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHEECCCCCEEEEECCCCCCCCEEEC SRPSGKQKTFARYRVKIGSTPVSLYNIHFESPREGLSAVGSARKRPWYLPKGIQRFERNV CCCCCCHHHHHHEEEEECCCCEEEEEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHCCC SIRLSQARMVQEFISQEKGPVIIGGDLNSPDASQVCAGLRDAGLHDAFAEGGRGYGYTYG EEEEHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCCHHHH HFLLQRRLPWMRVSWMRIDHVMMSSHFKALGCRTGTGEASDHRPVIADLLFLRK HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure TNRPAPKTPFLLILPLLAYGAILVALTLFNRFGPERWWFTAFNLYLPQAIWLIPGLFFS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH IICFLTARRWLWLPLLCVAWVAGPLMGFCWPWGQAHGSSTATPLRVMTWNVKYCSRGKLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECHHHCCCHHH QQALKDDIARANPDIVLFQDAGGVMQGALGSYFAKWHFHSQEQFVIASRFPLEETEILPI HHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHEECCCCCEEEEECCCCCCCCEEEC SRPSGKQKTFARYRVKIGSTPVSLYNIHFESPREGLSAVGSARKRPWYLPKGIQRFERNV CCCCCCHHHHHHEEEEECCCCEEEEEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHCCC SIRLSQARMVQEFISQEKGPVIIGGDLNSPDASQVCAGLRDAGLHDAFAEGGRGYGYTYG EEEEHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCCHHHH HFLLQRRLPWMRVSWMRIDHVMMSSHFKALGCRTGTGEASDHRPVIADLLFLRK HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA