Definition Pelobacter propionicus DSM 2379 chromosome, complete genome.
Accession NC_008609
Length 4,008,000

Click here to switch to the map view.

The map label for this gene is 118579304

Identifier: 118579304

GI number: 118579304

Start: 909189

End: 910646

Strand: Reverse

Name: 118579304

Synonym: Ppro_0867

Alternate gene names: NA

Gene position: 910646-909189 (Counterclockwise)

Preceding gene: 118579305

Following gene: 118579302

Centisome position: 22.72

GC content: 64.81

Gene sequence:

>1458_bases
ATGCAGCGCATCATCCTCTATGGCCTGATGTTCCTCTTCGCCACGGCCGTCGTGGCAACCGCCGAAAACCGGGAACTGTT
CCAGGTTGACCGGGAGTACTTCCCCTACTACCCCTCGCTCTTCAGATGGGAAAAATCCACCGCCCCCTTCACCGAACCGG
AGACCTGCGCCGGCTGCCATGAGCAGCAGCACAGGGAGTGGAACGGCTCGGTGCACAGCCTGGCCCTGCGTGACCCGATC
TACCAAGGGGAACTGAACAAGGGGGTGGCGGCGGTGGGGCACGACATCGCCCGCCAGTGCGAGGGGTGCCACTCGGCTGC
CGGGATGGTGACCGGTGAGTTGAAGAAACCGGGGCTGGCCGGCCTCTCCCCCCTGGCCCGCGCCGGGGTCTCCTGCGATG
TCTGTCACTCGGTCAGCGGAACCAGCCACACCAGAACACCCACCCGTGAGGCAGGAAACGGTTCGCTGATCCTGAACCCC
GGCTATGACGGCAAGGAGGGACCGCAACTGGTCAAACGGGGACCCAACAGGCCGGATGGGGAATGCGGCGGCGGATTCCA
CGAGTGTCGCCAATCCCCGCTGCACGACCAGGCCGACCTGTGCGCCGGCTGCCACCAGGTCTATCACCACGACAAGCACT
TCCCCCTCGAAGCCACCTACAACGAGTGGAAGCACAGCCCCTATGCCCAGCGCGGAATCCAGTGCCAGGACTGCCACATG
GTGGAGAACGATACCTTCCTGAAGAGCGCCGACGACTTCAGGAAGCCGCAGCGCTCCCAGTACCGCCACTACTTCAACGG
CACCAACTACCTGCTGGCCTGGCTGTCGGCCCAGGCCGCCACCAGGAACAATGACAAGGAGCAGGCCGAACGCCTGATGA
AGCAATATGACATGGCGGTAAAACGGCTGCAGAGCGCAGCCGGCCTGGAGCTGATCCCCATCTACGACAACGGCCGGTTG
CGGGAGCTGAAGATCAGGGTCTCCAACCTGCGCGCCGGCCACAACCTGCCCACCTCCCTCAGCAACATCCGCCAGATGTG
GCTGGAGGTCAGCGCCAGGGACCAGAACAACCGGCTGGTCATGACCAGCGGTTCCCTGAAGGCGAACGGCTCCCTGTCGC
CGGAGACCCGCATCTTCAACTCCGAGGGCATGGGCAGCGACTTCCACTTCTCCCACGACCCCTGGGTGATCACCGCCTTT
TCCCGCCACGAGACTATACCGTCCCGCGGCTACCGGGAGGTGTACTACGGGGTTCCCTCCCTCAGGGGGATCACCACCCT
GATCGTGGAGGCCAGGCTGCGCTACCGCACGGCTGACCAGCACGTGGCCGAGGCGCTGCTCTCCGCGGTGCCCGGGGACA
TCAACCTGGCCACAGAGTACGGCCTCACCTCCGTGCCGCCGCTACCGGTGGTGGACATGGCCAGCGTGCGCTCCACAGTG
GCCATGCGTAAACGATGA

Upstream 100 bases:

>100_bases
GAAGTGCCGCATGGGCTGACCGCCCGACGGCACGTCCCAAGAATCTGCTCCATTCATCGCCGAACCGTCCGACACAGTCC
ACGTTCGAAAGGAGTCCGTC

Downstream 100 bases:

>100_bases
ACCGACATATCGGCAACTGAGATCTGCCTGCGTTCGTGGGGACGGGCGATCCCTGGTCCCAACGGATCACACCACGTGCA
GGAGCGCCTGGACCAGCTGC

Product: cytochrome c family protein

Products: NA

Alternate protein names: Tetratricopeptide Repeat Protein; Response Regulator Aspartate Phosphatase RapC; Multiheme Cytochrome Family Protein; Secreted Protein

Number of amino acids: Translated: 485; Mature: 485

Protein sequence:

>485_residues
MQRIILYGLMFLFATAVVATAENRELFQVDREYFPYYPSLFRWEKSTAPFTEPETCAGCHEQQHREWNGSVHSLALRDPI
YQGELNKGVAAVGHDIARQCEGCHSAAGMVTGELKKPGLAGLSPLARAGVSCDVCHSVSGTSHTRTPTREAGNGSLILNP
GYDGKEGPQLVKRGPNRPDGECGGGFHECRQSPLHDQADLCAGCHQVYHHDKHFPLEATYNEWKHSPYAQRGIQCQDCHM
VENDTFLKSADDFRKPQRSQYRHYFNGTNYLLAWLSAQAATRNNDKEQAERLMKQYDMAVKRLQSAAGLELIPIYDNGRL
RELKIRVSNLRAGHNLPTSLSNIRQMWLEVSARDQNNRLVMTSGSLKANGSLSPETRIFNSEGMGSDFHFSHDPWVITAF
SRHETIPSRGYREVYYGVPSLRGITTLIVEARLRYRTADQHVAEALLSAVPGDINLATEYGLTSVPPLPVVDMASVRSTV
AMRKR

Sequences:

>Translated_485_residues
MQRIILYGLMFLFATAVVATAENRELFQVDREYFPYYPSLFRWEKSTAPFTEPETCAGCHEQQHREWNGSVHSLALRDPI
YQGELNKGVAAVGHDIARQCEGCHSAAGMVTGELKKPGLAGLSPLARAGVSCDVCHSVSGTSHTRTPTREAGNGSLILNP
GYDGKEGPQLVKRGPNRPDGECGGGFHECRQSPLHDQADLCAGCHQVYHHDKHFPLEATYNEWKHSPYAQRGIQCQDCHM
VENDTFLKSADDFRKPQRSQYRHYFNGTNYLLAWLSAQAATRNNDKEQAERLMKQYDMAVKRLQSAAGLELIPIYDNGRL
RELKIRVSNLRAGHNLPTSLSNIRQMWLEVSARDQNNRLVMTSGSLKANGSLSPETRIFNSEGMGSDFHFSHDPWVITAF
SRHETIPSRGYREVYYGVPSLRGITTLIVEARLRYRTADQHVAEALLSAVPGDINLATEYGLTSVPPLPVVDMASVRSTV
AMRKR
>Mature_485_residues
MQRIILYGLMFLFATAVVATAENRELFQVDREYFPYYPSLFRWEKSTAPFTEPETCAGCHEQQHREWNGSVHSLALRDPI
YQGELNKGVAAVGHDIARQCEGCHSAAGMVTGELKKPGLAGLSPLARAGVSCDVCHSVSGTSHTRTPTREAGNGSLILNP
GYDGKEGPQLVKRGPNRPDGECGGGFHECRQSPLHDQADLCAGCHQVYHHDKHFPLEATYNEWKHSPYAQRGIQCQDCHM
VENDTFLKSADDFRKPQRSQYRHYFNGTNYLLAWLSAQAATRNNDKEQAERLMKQYDMAVKRLQSAAGLELIPIYDNGRL
RELKIRVSNLRAGHNLPTSLSNIRQMWLEVSARDQNNRLVMTSGSLKANGSLSPETRIFNSEGMGSDFHFSHDPWVITAF
SRHETIPSRGYREVYYGVPSLRGITTLIVEARLRYRTADQHVAEALLSAVPGDINLATEYGLTSVPPLPVVDMASVRSTV
AMRKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54246; Mature: 54246

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRIILYGLMFLFATAVVATAENRELFQVDREYFPYYPSLFRWEKSTAPFTEPETCAGCH
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHCCCCCCCCCCCHHHHHHH
EQQHREWNGSVHSLALRDPIYQGELNKGVAAVGHDIARQCEGCHSAAGMVTGELKKPGLA
HHHHHHHCCCEEEEEHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCC
GLSPLARAGVSCDVCHSVSGTSHTRTPTREAGNGSLILNPGYDGKEGPQLVKRGPNRPDG
CCCHHHHCCCCEEHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHCCCCCCCC
ECGGGFHECRQSPLHDQADLCAGCHQVYHHDKHFPLEATYNEWKHSPYAQRGIQCQDCHM
CCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCHHHHCCCCCCCEE
VENDTFLKSADDFRKPQRSQYRHYFNGTNYLLAWLSAQAATRNNDKEQAERLMKQYDMAV
ECCCCHHCCCHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
KRLQSAAGLELIPIYDNGRLRELKIRVSNLRAGHNLPTSLSNIRQMWLEVSARDQNNRLV
HHHHHHCCCEEEEEECCCCEEEEEEEEEHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEE
MTSGSLKANGSLSPETRIFNSEGMGSDFHFSHDPWVITAFSRHETIPSRGYREVYYGVPS
EECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHCCCCC
LRGITTLIVEARLRYRTADQHVAEALLSAVPGDINLATEYGLTSVPPLPVVDMASVRSTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHCCCCCCCCCCCHHHHHHHHHH
AMRKR
HHCCC
>Mature Secondary Structure
MQRIILYGLMFLFATAVVATAENRELFQVDREYFPYYPSLFRWEKSTAPFTEPETCAGCH
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHCCCCCCCCCCCHHHHHHH
EQQHREWNGSVHSLALRDPIYQGELNKGVAAVGHDIARQCEGCHSAAGMVTGELKKPGLA
HHHHHHHCCCEEEEEHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCC
GLSPLARAGVSCDVCHSVSGTSHTRTPTREAGNGSLILNPGYDGKEGPQLVKRGPNRPDG
CCCHHHHCCCCEEHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHCCCCCCCC
ECGGGFHECRQSPLHDQADLCAGCHQVYHHDKHFPLEATYNEWKHSPYAQRGIQCQDCHM
CCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCHHHHCCCCCCCEE
VENDTFLKSADDFRKPQRSQYRHYFNGTNYLLAWLSAQAATRNNDKEQAERLMKQYDMAV
ECCCCHHCCCHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
KRLQSAAGLELIPIYDNGRLRELKIRVSNLRAGHNLPTSLSNIRQMWLEVSARDQNNRLV
HHHHHHCCCEEEEEECCCCEEEEEEEEEHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEE
MTSGSLKANGSLSPETRIFNSEGMGSDFHFSHDPWVITAFSRHETIPSRGYREVYYGVPS
EECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHCCCCC
LRGITTLIVEARLRYRTADQHVAEALLSAVPGDINLATEYGLTSVPPLPVVDMASVRSTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHCCCCCCCCCCCHHHHHHHHHH
AMRKR
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA