| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118579303
Identifier: 118579303
GI number: 118579303
Start: 908298
End: 909122
Strand: Direct
Name: 118579303
Synonym: Ppro_0866
Alternate gene names: NA
Gene position: 908298-909122 (Clockwise)
Preceding gene: 118579290
Following gene: 118579311
Centisome position: 22.66
GC content: 67.03
Gene sequence:
>825_bases ATGGCGACAACTGGACAGAGCGCGCCCCATGTCAAGGCGCGCCGTGATAAGCCCGCGGAATACCCGGAGCGCTTCCCCGT GCCCGACCACCTGGTCGGCTGGGAGAGTGCCTATCCGGCGTACGATCCTCCCTACTACGTCTCCCCGGTGGTGCTGGAGA ACGACTCATCCCGCAACCCGGCCGGCTGGGCCGACCCGGAGCAGCTTTCCCCGGCAGATGCCCCGCAGGAGAGCCTGTGC GGAGCGCTGCGCCATGACGAAAGGGGAAGGGCTCTGAACTCGGCCGGCAGGACCGGTCTGGCCGGGAGGGGGCTTTTGGG GAAGTGGGGGCCCAACTACGCCGCCGACCCGATCATCACGCGCATCAACCGCCGGGAGAATCGCCTGGAACTGCTGGCCA TCCAGCGCAGGGACAACGGCCAGTGGGCCATTCCGGGGGGCATGGTGGACAGGGGGGAGCTGGTCACCCGCACCCTGGCG CGGGAGCTTGTGGAGGAGACCGGCGTTAGCCTGGATATGGAGCGGGCAAGATTTATCTACCAGGGGTATGTGGACGACCC GAGGAACACGGACCATGCCTGGATGGAGACGACGGCAAAACATCTGCATCTCGACCCGGACATGGCGGAGCAACTGGAGC CGCGGGCCGGGAGCGATGCCCGGGCCGTGCGCTGGCTGCCGCTTACGGCGGAAACCATTGCCAGCCTCTACGCCAGCCAC TGCGTACTGGTCAAAAAGGCCCTGGAGCTGCTCTGCCAGGGGGGAAGGACCGGAATGAGCGAGGCTGACCGGCAGCTGGT CCAGGCGCTCCTGCACGTGGTGTGA
Upstream 100 bases:
>100_bases ACGCGAACCGCCGGGCGGGGGATTATTGTACTGGAGAGGTTGCCTGCTTTGGCATATAGTGCGGCTGCTGCATGCACTAA TTACCTTCAGGAGGGTGTCT
Downstream 100 bases:
>100_bases TCCGTTGGGACCAGGGATCGCCCGTCCCCACGAACGCAGGCAGATCTCAGTTGCCGATATGTCGGTTCATCGTTTACGCA TGGCCACTGTGGAGCGCACG
Product: NUDIX hydrolase
Products: NA
Alternate protein names: NUDIX Hydrolase
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MATTGQSAPHVKARRDKPAEYPERFPVPDHLVGWESAYPAYDPPYYVSPVVLENDSSRNPAGWADPEQLSPADAPQESLC GALRHDERGRALNSAGRTGLAGRGLLGKWGPNYAADPIITRINRRENRLELLAIQRRDNGQWAIPGGMVDRGELVTRTLA RELVEETGVSLDMERARFIYQGYVDDPRNTDHAWMETTAKHLHLDPDMAEQLEPRAGSDARAVRWLPLTAETIASLYASH CVLVKKALELLCQGGRTGMSEADRQLVQALLHVV
Sequences:
>Translated_274_residues MATTGQSAPHVKARRDKPAEYPERFPVPDHLVGWESAYPAYDPPYYVSPVVLENDSSRNPAGWADPEQLSPADAPQESLC GALRHDERGRALNSAGRTGLAGRGLLGKWGPNYAADPIITRINRRENRLELLAIQRRDNGQWAIPGGMVDRGELVTRTLA RELVEETGVSLDMERARFIYQGYVDDPRNTDHAWMETTAKHLHLDPDMAEQLEPRAGSDARAVRWLPLTAETIASLYASH CVLVKKALELLCQGGRTGMSEADRQLVQALLHVV >Mature_273_residues ATTGQSAPHVKARRDKPAEYPERFPVPDHLVGWESAYPAYDPPYYVSPVVLENDSSRNPAGWADPEQLSPADAPQESLCG ALRHDERGRALNSAGRTGLAGRGLLGKWGPNYAADPIITRINRRENRLELLAIQRRDNGQWAIPGGMVDRGELVTRTLAR ELVEETGVSLDMERARFIYQGYVDDPRNTDHAWMETTAKHLHLDPDMAEQLEPRAGSDARAVRWLPLTAETIASLYASHC VLVKKALELLCQGGRTGMSEADRQLVQALLHVV
Specific function: Unknown
COG id: COG1051
COG function: function code F; ADP-ribose pyrophosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI13129010, Length=282, Percent_Identity=40.4255319148936, Blast_Score=166, Evalue=2e-41, Organism=Homo sapiens, GI37594457, Length=282, Percent_Identity=40.4255319148936, Blast_Score=166, Evalue=3e-41, Organism=Homo sapiens, GI4507689, Length=269, Percent_Identity=34.9442379182156, Blast_Score=126, Evalue=2e-29, Organism=Caenorhabditis elegans, GI17532821, Length=240, Percent_Identity=42.9166666666667, Blast_Score=177, Evalue=4e-45, Organism=Drosophila melanogaster, GI24665426, Length=257, Percent_Identity=42.8015564202335, Blast_Score=168, Evalue=4e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30391; Mature: 30259
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATTGQSAPHVKARRDKPAEYPERFPVPDHLVGWESAYPAYDPPYYVSPVVLENDSSRNP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCEECCEEEECCCCCCC AGWADPEQLSPADAPQESLCGALRHDERGRALNSAGRTGLAGRGLLGKWGPNYAADPIIT CCCCCHHHCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHH RINRRENRLELLAIQRRDNGQWAIPGGMVDRGELVTRTLARELVEETGVSLDMERARFIY HHHCCCCCEEEEEEEECCCCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH QGYVDDPRNTDHAWMETTAKHLHLDPDMAEQLEPRAGSDARAVRWLPLTAETIASLYASH HCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHH CVLVKKALELLCQGGRTGMSEADRQLVQALLHVV HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC >Mature Secondary Structure ATTGQSAPHVKARRDKPAEYPERFPVPDHLVGWESAYPAYDPPYYVSPVVLENDSSRNP CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCEECCEEEECCCCCCC AGWADPEQLSPADAPQESLCGALRHDERGRALNSAGRTGLAGRGLLGKWGPNYAADPIIT CCCCCHHHCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHH RINRRENRLELLAIQRRDNGQWAIPGGMVDRGELVTRTLARELVEETGVSLDMERARFIY HHHCCCCCEEEEEEEECCCCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH QGYVDDPRNTDHAWMETTAKHLHLDPDMAEQLEPRAGSDARAVRWLPLTAETIASLYASH HCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHH CVLVKKALELLCQGGRTGMSEADRQLVQALLHVV HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA