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The map label for this gene is irpA [H]

Identifier: 118579263

GI number: 118579263

Start: 872888

End: 873964

Strand: Direct

Name: irpA [H]

Synonym: Ppro_0825

Alternate gene names: 118579263

Gene position: 872888-873964 (Clockwise)

Preceding gene: 118579262

Following gene: 118579264

Centisome position: 21.78

GC content: 65.46

Gene sequence:

>1077_bases
GTGCTTGAGGATTACGCGGACAAGGTGGTGCTGAAGACAATTGCCCGCGCCGTTCAGGATTTCAGGCTGCTGGAACAGGC
GGCCGTCAGGCTCAGGGCCGAGCCGACCGACGGGAATGCGGCTGCCGCCGCGGAGGCGTGGCGCACGGCCCGCGCCCAAT
GGAAGAAGACGGCCACCTTCATGTTCGGACCGGCGGCGCATTACAATTTCGACAAGCAGCTGGACACCTTTCCCCTCGAT
CGTCCCCTGGTGGATCACCTGCTGGGCGAGATGACGGCCGGCAGGGTGGCCGTTGACGAGCGGTACCTGCGCGAGGAACT
GCTGTCTACCCAGCGAGGCCTGCCGGCTGCCGAGTATCTGCTGTTCAGGGATGGAAAACCGCGGCGGGCGAAGGATATGA
CTCCGGCCGAGCTGGAGTACCTGGTCGCCGCAACCAGGGCCATGACCCTGGAAAGCATGGACTTCGAGGCATCCTGGGCC
GGCTCGTCCAGGATGCCGGCGGACAAGGCGGCCCTGCTCAAGGCGGCCGGAATGAGAACCAGAAGCTCCTATGCGGATGA
GTTCAAGCATCCGGGCGCCCCCGGAAGCCGCTATCTGTCGCACTCCGTTGCGCTTCAGGAGATTTTTCAGGAAAGCGTGG
CAGTTACCGAAGACCTGGGCGACGCCATCGCCGGCGAGCTGGACTCCGCCAACCCCCGTGGCGGCAGGACCTGGTACAGC
CGCAACGGGCGCGCCGACCTCCTGAATATCCTTAAAAGCGTCGAGAACGCGTATCTGGGGGGCGCCGAAGGGGACCGCGG
CCATTCGGTGTCGGAGCTTCTGGCGAGCCGGGACGAGGTTCTTGACCGACGTATCAGAATTGCCCTGGCGGACACGGCGT
TCAGGATCACCGAGGCCGCCGGACCGTACGGCGGAAACGGCGAAGAGAGGGAGCTGCTGATCAGAAGGGCGGAGTCGGCG
TGCCACAAGCTGACCGCCCGGCTGTCGGTCGCCGCGCTGCTGGTGGCCATGGACCCGTCAACCCGGCCGTTTGCCCCCTA
CGGAGTCCCGCTGCCGGAATCCCACCCGATGAAATGA

Upstream 100 bases:

>100_bases
CGTGCTGGCGGCACTGGCGCTTCTGGTCGGCCTGGGGGCTGTGGCGCTTGTCCGCAACGAGAGCGTTACACGGTTCCTTG
TCGAAAGAAAACTGGACCAG

Downstream 100 bases:

>100_bases
GGAGACCCATGAATCCAGACGGATTGCGCCGAAAAGCGCCGTTAATTCTGCTGCTGACACTCACCGTTGTTGCCGTCGGC
TTCAGCGCCCGGCTCCTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MLEDYADKVVLKTIARAVQDFRLLEQAAVRLRAEPTDGNAAAAAEAWRTARAQWKKTATFMFGPAAHYNFDKQLDTFPLD
RPLVDHLLGEMTAGRVAVDERYLREELLSTQRGLPAAEYLLFRDGKPRRAKDMTPAELEYLVAATRAMTLESMDFEASWA
GSSRMPADKAALLKAAGMRTRSSYADEFKHPGAPGSRYLSHSVALQEIFQESVAVTEDLGDAIAGELDSANPRGGRTWYS
RNGRADLLNILKSVENAYLGGAEGDRGHSVSELLASRDEVLDRRIRIALADTAFRITEAAGPYGGNGEERELLIRRAESA
CHKLTARLSVAALLVAMDPSTRPFAPYGVPLPESHPMK

Sequences:

>Translated_358_residues
MLEDYADKVVLKTIARAVQDFRLLEQAAVRLRAEPTDGNAAAAAEAWRTARAQWKKTATFMFGPAAHYNFDKQLDTFPLD
RPLVDHLLGEMTAGRVAVDERYLREELLSTQRGLPAAEYLLFRDGKPRRAKDMTPAELEYLVAATRAMTLESMDFEASWA
GSSRMPADKAALLKAAGMRTRSSYADEFKHPGAPGSRYLSHSVALQEIFQESVAVTEDLGDAIAGELDSANPRGGRTWYS
RNGRADLLNILKSVENAYLGGAEGDRGHSVSELLASRDEVLDRRIRIALADTAFRITEAAGPYGGNGEERELLIRRAESA
CHKLTARLSVAALLVAMDPSTRPFAPYGVPLPESHPMK
>Mature_358_residues
MLEDYADKVVLKTIARAVQDFRLLEQAAVRLRAEPTDGNAAAAAEAWRTARAQWKKTATFMFGPAAHYNFDKQLDTFPLD
RPLVDHLLGEMTAGRVAVDERYLREELLSTQRGLPAAEYLLFRDGKPRRAKDMTPAELEYLVAATRAMTLESMDFEASWA
GSSRMPADKAALLKAAGMRTRSSYADEFKHPGAPGSRYLSHSVALQEIFQESVAVTEDLGDAIAGELDSANPRGGRTWYS
RNGRADLLNILKSVENAYLGGAEGDRGHSVSELLASRDEVLDRRIRIALADTAFRITEAAGPYGGNGEERELLIRRAESA
CHKLTARLSVAALLVAMDPSTRPFAPYGVPLPESHPMK

Specific function: IrpA occurs under iron-deficient growth conditions in cyanobacterium Synechococcus and disappears in cells recovering from iron starvation. It seems to be involved in iron acquisition, uptake or storage [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018976 [H]

Pfam domain/function: PF09375 Peptidase_M75 [H]

EC number: NA

Molecular weight: Translated: 39350; Mature: 39350

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEDYADKVVLKTIARAVQDFRLLEQAAVRLRAEPTDGNAAAAAEAWRTARAQWKKTATF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHE
MFGPAAHYNFDKQLDTFPLDRPLVDHLLGEMTAGRVAVDERYLREELLSTQRGLPAAEYL
EECCHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHH
LFRDGKPRRAKDMTPAELEYLVAATRAMTLESMDFEASWAGSSRMPADKAALLKAAGMRT
EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCHH
RSSYADEFKHPGAPGSRYLSHSVALQEIFQESVAVTEDLGDAIAGELDSANPRGGRTWYS
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
RNGRADLLNILKSVENAYLGGAEGDRGHSVSELLASRDEVLDRRIRIALADTAFRITEAA
CCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHCC
GPYGGNGEERELLIRRAESACHKLTARLSVAALLVAMDPSTRPFAPYGVPLPESHPMK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLEDYADKVVLKTIARAVQDFRLLEQAAVRLRAEPTDGNAAAAAEAWRTARAQWKKTATF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHE
MFGPAAHYNFDKQLDTFPLDRPLVDHLLGEMTAGRVAVDERYLREELLSTQRGLPAAEYL
EECCHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHH
LFRDGKPRRAKDMTPAELEYLVAATRAMTLESMDFEASWAGSSRMPADKAALLKAAGMRT
EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCHH
RSSYADEFKHPGAPGSRYLSHSVALQEIFQESVAVTEDLGDAIAGELDSANPRGGRTWYS
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
RNGRADLLNILKSVENAYLGGAEGDRGHSVSELLASRDEVLDRRIRIALADTAFRITEAA
CCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHCC
GPYGGNGEERELLIRRAESACHKLTARLSVAALLVAMDPSTRPFAPYGVPLPESHPMK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3139627 [H]