| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is yebA [H]
Identifier: 118579259
GI number: 118579259
Start: 868448
End: 870526
Strand: Direct
Name: yebA [H]
Synonym: Ppro_0821
Alternate gene names: 118579259
Gene position: 868448-870526 (Clockwise)
Preceding gene: 118579258
Following gene: 118579260
Centisome position: 21.67
GC content: 60.94
Gene sequence:
>2079_bases ATGAGCGGTTATTATCAGTGGGTACTGCTGACCCTTGTCATGGCCGCTTTCCCGAGTCTTGTGCGTCTTCCCTTATGGGT TGCCGGGATAGCGCTTGCCGGTGGCGCGCTGCATTACGCGGGGCGGTGGCGGAAAGGCTGGTATGGCCGGGGCGCGGGCG CCGCTTTGCTGACGATGACCGTGGCTGGCATCTGGCTTTCGTTTGAAAGCTGGTTCAGCGGCGACGCCGTGCTCAGCTTC TTCATTGCCGTCGTGTTTCTCAAATGGGGGGAGGCGCGCAAACGGCGGGACTATCTGCTTCTGATATTTGCCGCCGTGAT CCTGACCGCTTGCGGCACGCTGTATTGGGAAAACCTTTTGAACCTGCTGCACATGCTGCTGGTGGTTTTTCTGCTTACGG TCAGTCTGGTGGCGATTCACTCGGGTGACTCCGCCTTGTCCGGACTGTTTTTTCTTAGGCGTTCCGGACTGATTTTCGCG CTCGGGCTGCCGCTGATGCTGCTCCTTTTTCTGACCCTGCCGCGTATTCCAGGGCCTTTGTGGGATATCGGCCTGGCCTT TGGGCTGCCGGTCAAGGCCATGCTGGACCGGGGCGCGGGGGATTTCGGCAAGGCGACATCAATGCAGCCGGGCGGGATTC ACAAGGCAAGCCAGCAGACCGGCAATGTTCTGGTCGCCGAATTCAAGGGCGCCGTGCCCTATAAAAGCCGGCTGTACTGG CGCGGACCGGTTTTCTGGGAGTATGACGGCGAAAAATGGAATCTCCCGGCAGGCTGGGATGACCGAACCAGGCTGCTCAA GCGCGCTATCCGCACGAAAAAACGGCTCGACCGGGAACTGCATTTCCGGAAGGATCCGGTGCGCTACACCCTGCGGGTCA TGCCCAATGGCGGCCGCTGGCTTTATGGTCTCGACATTCCCGCGGCGCCGGCCCCCGAATCGTTCATCTCCGACGAATAC CAGTTGTTGAGCATCCGGAAGATCGACGACCAGGAACCCAAGTTTGAGATGCTTTCGTACCTGGAGTATCTGACAGGGGT CGAGCTTGGCGACGAACAGCGGAAAAGGGGGCTTTCCTGGTCGGAAAACTCCAATCCGCGGCTGCGCGCCCTTGGAGCGG AGCTGGCAAAAAAGCATAAAAAGACGGACGCCATCGTCCACCAGGCGCTCCGTCTTCTGGCGGACGGCGCCTACCGCTTT GACGCCGGGTATGTCATCCCTCCGGGAAAGGACTCGCTGGATCGCTTCTTCTTTGACGAAAAACGGGGCGGCGCCGAATA TCTCGCCGGCAGTTTCGTGATGCTGATGAGGGCCGCCGGTATTCCGGCCCGGCTGGTCAGCGGCTACCGCGGCGGGACCA TCATCGCGCTGACCAATTTCGTGATCGTCAAACGCGCCGACGCCCATGCCTGGGTGGAAATCTGGCGGGACGGCAAGGGG TGGAGCAGGGTGGAGCCCAAGGATATCATCCTGCCGCTCGCGGCTGACGACACGGCGCTTTCGGAGAAAAAGCCCAAAGA ATCCGTCGTAAAGATGGAAACCGGCAGGGAAAAGCCGCTCCCCGAAACGGAAAAGCCGGACAAGGGCGGTAAACCGGCGG AACCGGTGGCGGTCAAACAGAAGGATCGCCGGAGTCTGCCGAGCTTATCTTCCCTTCTGGGAGGCGTGCGGAAATGGGTT ATCCGCTACGACCCCAACCGCCAGATGGAACTCCTGAAAGGGGCCGGCGTCAAGGAAGGCAACTGGCTCGATCTTCTGAT TGGCGGTACGGCGGGGGTTCTGTCGTTGCTGGGCATCTATCTGCTGGCGGCATGGTGGCGCGACCGGCGCCGGGTCGACC CGGTTGCGGAGAGCTGGCTCAGGTTCTGCCGCAGGTTGAAAACGCTCGGCGTGGAGAAGTCGGAAACCGAATGCCCGCGC GACTATCTCCGGCGCGTGAGCCGTGAACGTCCCGAACTGTCCGCAGCTGCGGAGGATATCATCGGCCGCTACATCCTGAT CCGCTACGGGGAGGAGTGCTCCGGGGAAACGACGGCCCTCTTCATGCGTCAGGTTCAGCGTTTCATCTCCATGTCATAG
Upstream 100 bases:
>100_bases TGGAACTGCCGGGAATGAAGATTGAACCGGCGGGCGAGGAGAGCCATCTCCGCCATTGCCTGCAAGCACTTGCCCTTTAT GGCGAAACGGAGCGGACTTC
Downstream 100 bases:
>100_bases GTTTTCCCTCCCTACCTCCCTCTTGAAGGGGGAGGAACCAGGCAGCAAGAACCCGGCCGGACAACGCTGATAAAAATTAC GAGAAGGACTGAATATGAAA
Product: transglutaminase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 692; Mature: 691
Protein sequence:
>692_residues MSGYYQWVLLTLVMAAFPSLVRLPLWVAGIALAGGALHYAGRWRKGWYGRGAGAALLTMTVAGIWLSFESWFSGDAVLSF FIAVVFLKWGEARKRRDYLLLIFAAVILTACGTLYWENLLNLLHMLLVVFLLTVSLVAIHSGDSALSGLFFLRRSGLIFA LGLPLMLLLFLTLPRIPGPLWDIGLAFGLPVKAMLDRGAGDFGKATSMQPGGIHKASQQTGNVLVAEFKGAVPYKSRLYW RGPVFWEYDGEKWNLPAGWDDRTRLLKRAIRTKKRLDRELHFRKDPVRYTLRVMPNGGRWLYGLDIPAAPAPESFISDEY QLLSIRKIDDQEPKFEMLSYLEYLTGVELGDEQRKRGLSWSENSNPRLRALGAELAKKHKKTDAIVHQALRLLADGAYRF DAGYVIPPGKDSLDRFFFDEKRGGAEYLAGSFVMLMRAAGIPARLVSGYRGGTIIALTNFVIVKRADAHAWVEIWRDGKG WSRVEPKDIILPLAADDTALSEKKPKESVVKMETGREKPLPETEKPDKGGKPAEPVAVKQKDRRSLPSLSSLLGGVRKWV IRYDPNRQMELLKGAGVKEGNWLDLLIGGTAGVLSLLGIYLLAAWWRDRRRVDPVAESWLRFCRRLKTLGVEKSETECPR DYLRRVSRERPELSAAAEDIIGRYILIRYGEECSGETTALFMRQVQRFISMS
Sequences:
>Translated_692_residues MSGYYQWVLLTLVMAAFPSLVRLPLWVAGIALAGGALHYAGRWRKGWYGRGAGAALLTMTVAGIWLSFESWFSGDAVLSF FIAVVFLKWGEARKRRDYLLLIFAAVILTACGTLYWENLLNLLHMLLVVFLLTVSLVAIHSGDSALSGLFFLRRSGLIFA LGLPLMLLLFLTLPRIPGPLWDIGLAFGLPVKAMLDRGAGDFGKATSMQPGGIHKASQQTGNVLVAEFKGAVPYKSRLYW RGPVFWEYDGEKWNLPAGWDDRTRLLKRAIRTKKRLDRELHFRKDPVRYTLRVMPNGGRWLYGLDIPAAPAPESFISDEY QLLSIRKIDDQEPKFEMLSYLEYLTGVELGDEQRKRGLSWSENSNPRLRALGAELAKKHKKTDAIVHQALRLLADGAYRF DAGYVIPPGKDSLDRFFFDEKRGGAEYLAGSFVMLMRAAGIPARLVSGYRGGTIIALTNFVIVKRADAHAWVEIWRDGKG WSRVEPKDIILPLAADDTALSEKKPKESVVKMETGREKPLPETEKPDKGGKPAEPVAVKQKDRRSLPSLSSLLGGVRKWV IRYDPNRQMELLKGAGVKEGNWLDLLIGGTAGVLSLLGIYLLAAWWRDRRRVDPVAESWLRFCRRLKTLGVEKSETECPR DYLRRVSRERPELSAAAEDIIGRYILIRYGEECSGETTALFMRQVQRFISMS >Mature_691_residues SGYYQWVLLTLVMAAFPSLVRLPLWVAGIALAGGALHYAGRWRKGWYGRGAGAALLTMTVAGIWLSFESWFSGDAVLSFF IAVVFLKWGEARKRRDYLLLIFAAVILTACGTLYWENLLNLLHMLLVVFLLTVSLVAIHSGDSALSGLFFLRRSGLIFAL GLPLMLLLFLTLPRIPGPLWDIGLAFGLPVKAMLDRGAGDFGKATSMQPGGIHKASQQTGNVLVAEFKGAVPYKSRLYWR GPVFWEYDGEKWNLPAGWDDRTRLLKRAIRTKKRLDRELHFRKDPVRYTLRVMPNGGRWLYGLDIPAAPAPESFISDEYQ LLSIRKIDDQEPKFEMLSYLEYLTGVELGDEQRKRGLSWSENSNPRLRALGAELAKKHKKTDAIVHQALRLLADGAYRFD AGYVIPPGKDSLDRFFFDEKRGGAEYLAGSFVMLMRAAGIPARLVSGYRGGTIIALTNFVIVKRADAHAWVEIWRDGKGW SRVEPKDIILPLAADDTALSEKKPKESVVKMETGREKPLPETEKPDKGGKPAEPVAVKQKDRRSLPSLSSLLGGVRKWVI RYDPNRQMELLKGAGVKEGNWLDLLIGGTAGVLSLLGIYLLAAWWRDRRRVDPVAESWLRFCRRLKTLGVEKSETECPRD YLRRVSRERPELSAAAEDIIGRYILIRYGEECSGETTALFMRQVQRFISMS
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002931 [H]
Pfam domain/function: PF01841 Transglut_core [H]
EC number: NA
Molecular weight: Translated: 77853; Mature: 77722
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGYYQWVLLTLVMAAFPSLVRLPLWVAGIALAGGALHYAGRWRKGWYGRGAGAALLTMT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCHHHHHHH VAGIWLSFESWFSGDAVLSFFIAVVFLKWGEARKRRDYLLLIFAAVILTACGTLYWENLL HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLLHMLLVVFLLTVSLVAIHSGDSALSGLFFLRRSGLIFALGLPLMLLLFLTLPRIPGPL HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCH WDIGLAFGLPVKAMLDRGAGDFGKATSMQPGGIHKASQQTGNVLVAEFKGAVPYKSRLYW HHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCEEEEECCCCCCHHHCEEE RGPVFWEYDGEKWNLPAGWDDRTRLLKRAIRTKKRLDRELHFRKDPVRYTLRVMPNGGRW CCCEEEEECCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCE LYGLDIPAAPAPESFISDEYQLLSIRKIDDQEPKFEMLSYLEYLTGVELGDEQRKRGLSW EEEECCCCCCCCHHHHCCCHHEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCC SENSNPRLRALGAELAKKHKKTDAIVHQALRLLADGAYRFDAGYVIPPGKDSLDRFFFDE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEECCCCCCHHHHHHHHC KRGGAEYLAGSFVMLMRAAGIPARLVSGYRGGTIIALTNFVIVKRADAHAWVEIWRDGKG CCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCEEEEEEEEEEEEECCCCEEHHHHCCCCC WSRVEPKDIILPLAADDTALSEKKPKESVVKMETGREKPLPETEKPDKGGKPAEPVAVKQ CCCCCCCCEEEEECCCCCHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC KDRRSLPSLSSLLGGVRKWVIRYDPNRQMELLKGAGVKEGNWLDLLIGGTAGVLSLLGIY HHHHCCCHHHHHHHHHHHHHEEECCCCHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHH LLAAWWRDRRRVDPVAESWLRFCRRLKTLGVEKSETECPRDYLRRVSRERPELSAAAEDI HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHH IGRYILIRYGEECSGETTALFMRQVQRFISMS HCCEEEEEECCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure SGYYQWVLLTLVMAAFPSLVRLPLWVAGIALAGGALHYAGRWRKGWYGRGAGAALLTMT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCHHHHHHH VAGIWLSFESWFSGDAVLSFFIAVVFLKWGEARKRRDYLLLIFAAVILTACGTLYWENLL HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLLHMLLVVFLLTVSLVAIHSGDSALSGLFFLRRSGLIFALGLPLMLLLFLTLPRIPGPL HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCH WDIGLAFGLPVKAMLDRGAGDFGKATSMQPGGIHKASQQTGNVLVAEFKGAVPYKSRLYW HHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCEEEEECCCCCCHHHCEEE RGPVFWEYDGEKWNLPAGWDDRTRLLKRAIRTKKRLDRELHFRKDPVRYTLRVMPNGGRW CCCEEEEECCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCE LYGLDIPAAPAPESFISDEYQLLSIRKIDDQEPKFEMLSYLEYLTGVELGDEQRKRGLSW EEEECCCCCCCCHHHHCCCHHEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCC SENSNPRLRALGAELAKKHKKTDAIVHQALRLLADGAYRFDAGYVIPPGKDSLDRFFFDE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEECCCCCCHHHHHHHHC KRGGAEYLAGSFVMLMRAAGIPARLVSGYRGGTIIALTNFVIVKRADAHAWVEIWRDGKG CCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCEEEEEEEEEEEEECCCCEEHHHHCCCCC WSRVEPKDIILPLAADDTALSEKKPKESVVKMETGREKPLPETEKPDKGGKPAEPVAVKQ CCCCCCCCEEEEECCCCCHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC KDRRSLPSLSSLLGGVRKWVIRYDPNRQMELLKGAGVKEGNWLDLLIGGTAGVLSLLGIY HHHHCCCHHHHHHHHHHHHHEEECCCCHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHH LLAAWWRDRRRVDPVAESWLRFCRRLKTLGVEKSETECPRDYLRRVSRERPELSAAAEDI HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHH IGRYILIRYGEECSGETTALFMRQVQRFISMS HCCEEEEEECCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377 [H]