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The map label for this gene is ygdQ [C]

Identifier: 118579224

GI number: 118579224

Start: 835440

End: 836201

Strand: Reverse

Name: ygdQ [C]

Synonym: Ppro_0786

Alternate gene names: 118579224

Gene position: 836201-835440 (Counterclockwise)

Preceding gene: 118579225

Following gene: 118579223

Centisome position: 20.86

GC content: 59.06

Gene sequence:

>762_bases
ATGGAATGGCTGACAGACCCCCAGGTTTGGTTGGCGCTGGTAACGCTAACTTCGCTGGAAATCGTTCTGGGCATCGACAA
CATTATCTTCATCTCCATCCAGGCCGGAAAACTCCCCCGAGAGTTGCAAGAGAGGGCCCGCCTGGTCGGTCTCGGTCTGG
CAATGTTCATTCGCATCGCCCTGCTCTTCTCCCTGACCTGGCTGATGGGGCTCACCGCGCCGCTCTTTTCCTTGCTGGGT
AACGAGATTTCCGGCCGCGACCTGATCCTGCTTTCGGGCGGACTGTTTCTGCTCTGGAAGAGCACCATGGAGATCCACGA
GAAACTGGAAGGCGATGAAGTGGTCGCGACAAAGAGCGTCGGCACCACCTTCGGCGCGGTGATCGTCCAGATCCTGCTGC
TGGACATCGTTTTCTCGCTGGATTCGATCATCACCGCCCTGGGCATGGCCAACAAACTGGCCGTCATGGTCGCCGCCGTC
GTCATCGCCGTCGGTTTCATGATGTTGTTTTCGGGGAAGATCAGTTCCTTCGTGGAAAGACACCCCACCATCAAGATGCT
GGCGCTCAGCTTCCTGCTGCTGATCGGCGTGGCGCTGATCGGCGACGGCTTCGACATGCACATCCCCAAGGGATACATCT
ATTTCGCCATGGCTTTCTCGGTCATGGTCGAGATGCTCAACCTGCGCATGAAGCGCGGGATGCCGGTGGTGCTTCACCAG
CCCCACCTGGAGGGGGCGGAACCGGGAGAAGGCGACCGCTGA

Upstream 100 bases:

>100_bases
AATCATGATCTGAAATGAACGTGACACGGTCGCCGGCAAGGGGATAATCTCCGGGCCGTTCATCGGCCGGTTCACTGCAT
AAATCAGGAGACGCAACTGA

Downstream 100 bases:

>100_bases
CTCCGGCCAGAACCCTCCGCGGCCCAGTCGCGAACGACATTATCAAGGAGATTTGTGGATGAAACGACATGTAATGAAAT
TCTTTGCCTTGGCCGCCATG

Product: integral membrane protein TerC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MEWLTDPQVWLALVTLTSLEIVLGIDNIIFISIQAGKLPRELQERARLVGLGLAMFIRIALLFSLTWLMGLTAPLFSLLG
NEISGRDLILLSGGLFLLWKSTMEIHEKLEGDEVVATKSVGTTFGAVIVQILLLDIVFSLDSIITALGMANKLAVMVAAV
VIAVGFMMLFSGKISSFVERHPTIKMLALSFLLLIGVALIGDGFDMHIPKGYIYFAMAFSVMVEMLNLRMKRGMPVVLHQ
PHLEGAEPGEGDR

Sequences:

>Translated_253_residues
MEWLTDPQVWLALVTLTSLEIVLGIDNIIFISIQAGKLPRELQERARLVGLGLAMFIRIALLFSLTWLMGLTAPLFSLLG
NEISGRDLILLSGGLFLLWKSTMEIHEKLEGDEVVATKSVGTTFGAVIVQILLLDIVFSLDSIITALGMANKLAVMVAAV
VIAVGFMMLFSGKISSFVERHPTIKMLALSFLLLIGVALIGDGFDMHIPKGYIYFAMAFSVMVEMLNLRMKRGMPVVLHQ
PHLEGAEPGEGDR
>Mature_253_residues
MEWLTDPQVWLALVTLTSLEIVLGIDNIIFISIQAGKLPRELQERARLVGLGLAMFIRIALLFSLTWLMGLTAPLFSLLG
NEISGRDLILLSGGLFLLWKSTMEIHEKLEGDEVVATKSVGTTFGAVIVQILLLDIVFSLDSIITALGMANKLAVMVAAV
VIAVGFMMLFSGKISSFVERHPTIKMLALSFLLLIGVALIGDGFDMHIPKGYIYFAMAFSVMVEMLNLRMKRGMPVVLHQ
PHLEGAEPGEGDR

Specific function: Unknown

COG id: COG0861

COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0053 family [H]

Homologues:

Organism=Escherichia coli, GI1789197, Length=234, Percent_Identity=58.974358974359, Blast_Score=249, Evalue=1e-67,
Organism=Escherichia coli, GI1788119, Length=244, Percent_Identity=50, Blast_Score=239, Evalue=1e-64,
Organism=Escherichia coli, GI87082033, Length=228, Percent_Identity=53.9473684210526, Blast_Score=229, Evalue=1e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005496 [H]

Pfam domain/function: PF03741 TerC [H]

EC number: NA

Molecular weight: Translated: 27712; Mature: 27712

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEWLTDPQVWLALVTLTSLEIVLGIDNIIFISIQAGKLPRELQERARLVGLGLAMFIRIA
CCCCCCHHHHHHHHHHHHHHHHEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
LLFSLTWLMGLTAPLFSLLGNEISGRDLILLSGGLFLLWKSTMEIHEKLEGDEVVATKSV
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEHHH
GTTFGAVIVQILLLDIVFSLDSIITALGMANKLAVMVAAVVIAVGFMMLFSGKISSFVER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HPTIKMLALSFLLLIGVALIGDGFDMHIPKGYIYFAMAFSVMVEMLNLRMKRGMPVVLHQ
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC
PHLEGAEPGEGDR
CCCCCCCCCCCCC
>Mature Secondary Structure
MEWLTDPQVWLALVTLTSLEIVLGIDNIIFISIQAGKLPRELQERARLVGLGLAMFIRIA
CCCCCCHHHHHHHHHHHHHHHHEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
LLFSLTWLMGLTAPLFSLLGNEISGRDLILLSGGLFLLWKSTMEIHEKLEGDEVVATKSV
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEHHH
GTTFGAVIVQILLLDIVFSLDSIITALGMANKLAVMVAAVVIAVGFMMLFSGKISSFVER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HPTIKMLALSFLLLIGVALIGDGFDMHIPKGYIYFAMAFSVMVEMLNLRMKRGMPVVLHQ
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC
PHLEGAEPGEGDR
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]