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The map label for this gene is lpsE [H]

Identifier: 118579207

GI number: 118579207

Start: 818554

End: 819630

Strand: Direct

Name: lpsE [H]

Synonym: Ppro_0769

Alternate gene names: 118579207

Gene position: 818554-819630 (Clockwise)

Preceding gene: 118579206

Following gene: 118579208

Centisome position: 20.42

GC content: 61.0

Gene sequence:

>1077_bases
ATGGATACATCTCAATTTCGGCTCATGCAGATCATGCTTTCATCCCAAGAGGGGGGAGCAGAGACCTTTTTCGAAAAGCT
CTGCCTGGCCCTGGCTGATGCCGGCATCCGTCAGTACGTGGTGATGGAGCCCAATCCCCGGCGCGAGGCTCTCCTTACGG
CCCACCCCCTGGTGCAGGTCAAGCTGATCCGCTTTCGCGGCCTGCGGGAAATCCCCGGCCGGATCCGTATCGCCCGCCAT
GCCAGGCAGATCAAACCGAGCCTGATGCTCATCTGGATGGACCGCGCCGTAAAACGGGCGCCACGGGGGTATTGTCCCGT
TGTCGCTCGCCTGGGGGGGTATTACGGTCTGGACCGCTACCGGGGGTGCGACCGTCTGATCGGCAATACTCCCGATATCG
TTGAATACTTCCTGAAAAGCGGCATTCCGGCCGAGCGCGCCGTGTGCATCCCCAACTTCGGTGACATTGCCCCGGGGAGC
GCTTCCCGTGATCAGTCCAGGAGAATGATCCGTGCATCGATGGGGATACCGGACCATCATCACCTGCTGCTGGCCCTGGG
ACGTCTCCATTCGGCCAAGGCGCATGATACGCTGATCCGGGCGATCGTCCCCATTCCGGACGTATCGGTCATGATCGCCG
GTGAGGGGCCGCTGCGCGCCGAGCTGGAGGCGATGACCGGTGAGTTGGGTGTCGCGGAACGTGTTCATCTCCTGGGGTGG
CGCAGCGACATTGCCGATCTTTTTGCCGCCGCTGATATCAGCGTATTCCCTTCGCGATTCGAGCCGTTCGGGAATGTGGT
GGTGGAAAGTTGGGCCCAGCAGGTTCCGCTCATCGCGGCGCGCTCCGTCGGGCCTGCCTGGCTGGTGGATGATGGTGTCG
ACGGCCTGTTGTTCGATATCGATCATGTGGCTCAACTGACTGAGTGTATCCAGGCCATGATTGCCCAGCCCGACTTGGCA
CAGCGTCTGGTCGAGGCGGGACGGGACAAACTCCGGCGGTGTTTCAGTCAGGAGGCCATTGTCGAGCGCTATATCGAATT
GTTCGATGATGTCATGGAGAAGGCTTGTACGGGGTAG

Upstream 100 bases:

>100_bases
GGAGGCATGAATGGAAATTGACCTGGGCTCGATGAACCGGTATGATCATTCACGTCGTCCATTCAGACACCCCTTAGGTT
GAAGTTCCGGCGCTAATCCC

Downstream 100 bases:

>100_bases
TCGTCGTCGGGAAGGGGGAAAGATCACTTCTCCTCTGGACGGTCGTCATACATTACATAACCTAAGTGGAGGAAGGCTGA
ATGGCGCGGGAGAAACAGCA

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MDTSQFRLMQIMLSSQEGGAETFFEKLCLALADAGIRQYVVMEPNPRREALLTAHPLVQVKLIRFRGLREIPGRIRIARH
ARQIKPSLMLIWMDRAVKRAPRGYCPVVARLGGYYGLDRYRGCDRLIGNTPDIVEYFLKSGIPAERAVCIPNFGDIAPGS
ASRDQSRRMIRASMGIPDHHHLLLALGRLHSAKAHDTLIRAIVPIPDVSVMIAGEGPLRAELEAMTGELGVAERVHLLGW
RSDIADLFAAADISVFPSRFEPFGNVVVESWAQQVPLIAARSVGPAWLVDDGVDGLLFDIDHVAQLTECIQAMIAQPDLA
QRLVEAGRDKLRRCFSQEAIVERYIELFDDVMEKACTG

Sequences:

>Translated_358_residues
MDTSQFRLMQIMLSSQEGGAETFFEKLCLALADAGIRQYVVMEPNPRREALLTAHPLVQVKLIRFRGLREIPGRIRIARH
ARQIKPSLMLIWMDRAVKRAPRGYCPVVARLGGYYGLDRYRGCDRLIGNTPDIVEYFLKSGIPAERAVCIPNFGDIAPGS
ASRDQSRRMIRASMGIPDHHHLLLALGRLHSAKAHDTLIRAIVPIPDVSVMIAGEGPLRAELEAMTGELGVAERVHLLGW
RSDIADLFAAADISVFPSRFEPFGNVVVESWAQQVPLIAARSVGPAWLVDDGVDGLLFDIDHVAQLTECIQAMIAQPDLA
QRLVEAGRDKLRRCFSQEAIVERYIELFDDVMEKACTG
>Mature_358_residues
MDTSQFRLMQIMLSSQEGGAETFFEKLCLALADAGIRQYVVMEPNPRREALLTAHPLVQVKLIRFRGLREIPGRIRIARH
ARQIKPSLMLIWMDRAVKRAPRGYCPVVARLGGYYGLDRYRGCDRLIGNTPDIVEYFLKSGIPAERAVCIPNFGDIAPGS
ASRDQSRRMIRASMGIPDHHHLLLALGRLHSAKAHDTLIRAIVPIPDVSVMIAGEGPLRAELEAMTGELGVAERVHLLGW
RSDIADLFAAADISVFPSRFEPFGNVVVESWAQQVPLIAARSVGPAWLVDDGVDGLLFDIDHVAQLTECIQAMIAQPDLA
QRLVEAGRDKLRRCFSQEAIVERYIELFDDVMEKACTG

Specific function: Involved In The Addition Of The First Glucose Residue To The Lipopolysaccharide Core. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Escherichia coli, GI1790061, Length=170, Percent_Identity=27.0588235294118, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 39814; Mature: 39814

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTSQFRLMQIMLSSQEGGAETFFEKLCLALADAGIRQYVVMEPNPRREALLTAHPLVQV
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHEEEEECCCCCHHHHHHHCCHHHH
KLIRFRGLREIPGRIRIARHARQIKPSLMLIWMDRAVKRAPRGYCPVVARLGGYYGLDRY
HHHHHCCCHHCCHHHHHHHHHHHCCCHHEEEEHHHHHHHCCCCCCHHHHHHCCCCCCHHH
RGCDRLIGNTPDIVEYFLKSGIPAERAVCIPNFGDIAPGSASRDQSRRMIRASMGIPDHH
CCHHHHHCCCHHHHHHHHHCCCCHHHEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCHH
HLLLALGRLHSAKAHDTLIRAIVPIPDVSVMIAGEGPLRAELEAMTGELGVAERVHLLGW
HHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHH
RSDIADLFAAADISVFPSRFEPFGNVVVESWAQQVPLIAARSVGPAWLVDDGVDGLLFDI
HHHHHHHHHHCCHHHCCHHCCHHHHHHHHHHHHHCCHHHHCCCCCCEEECCCCCCHHHHH
DHVAQLTECIQAMIAQPDLAQRLVEAGRDKLRRCFSQEAIVERYIELFDDVMEKACTG
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDTSQFRLMQIMLSSQEGGAETFFEKLCLALADAGIRQYVVMEPNPRREALLTAHPLVQV
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHEEEEECCCCCHHHHHHHCCHHHH
KLIRFRGLREIPGRIRIARHARQIKPSLMLIWMDRAVKRAPRGYCPVVARLGGYYGLDRY
HHHHHCCCHHCCHHHHHHHHHHHCCCHHEEEEHHHHHHHCCCCCCHHHHHHCCCCCCHHH
RGCDRLIGNTPDIVEYFLKSGIPAERAVCIPNFGDIAPGSASRDQSRRMIRASMGIPDHH
CCHHHHHCCCHHHHHHHHHCCCCHHHEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCHH
HLLLALGRLHSAKAHDTLIRAIVPIPDVSVMIAGEGPLRAELEAMTGELGVAERVHLLGW
HHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHH
RSDIADLFAAADISVFPSRFEPFGNVVVESWAQQVPLIAARSVGPAWLVDDGVDGLLFDI
HHHHHHHHHHCCHHHCCHHCCHHHHHHHHHHHHHCCHHHHCCCCCCEEECCCCCCHHHHH
DHVAQLTECIQAMIAQPDLAQRLVEAGRDKLRRCFSQEAIVERYIELFDDVMEKACTG
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11157937; 11481430 [H]