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The map label for this gene is ycbL [C]

Identifier: 118579159

GI number: 118579159

Start: 753015

End: 753647

Strand: Reverse

Name: ycbL [C]

Synonym: Ppro_0720

Alternate gene names: 118579159

Gene position: 753647-753015 (Counterclockwise)

Preceding gene: 118579162

Following gene: 118579154

Centisome position: 18.8

GC content: 60.51

Gene sequence:

>633_bases
ATGATCATTGAAACCATTCCGGTTGGCCCCCTTCAGGTCAACGGCTATATTCTGGGATGCGAGAGGAGTCGTGAAGGGGT
TGTCATCGATGCGGGTGGAGATGTTGACAGACTGCTGGCCCGAATCACGAAACTGGAGCTGAGCATACGTTACCTTCTCG
ACACCCACGGCCACTTCGATCACGTGGGCGGAAACCGGGCCTTTCTGAAGGCCACCGGCGCCAAATTTCTGATCCATGAA
CGGGACGCCTTCCTGCTCTCCATGGCTGCCGACGCCGGCAGGAGTTTCGGGGTGCTTACGGAAAATTCTCCCCAGCCGGA
CCAGTACCTGACCGACGGCATGACCATCTCGTTCGGTGACCAGCGACTGAAGGTCATCCATACGCCGGGGCATTCGCCGG
GAGGGTGCTGCTTCTACAGCATGAGCACGGGGGTGCTGTTCACGGGGGATACGCTCTTCAACGGCTCGGTGGGCAGGACC
GACCTGCCGGGCGGCTCCATGGAGGTGCTGACGCGCTCGATCCGTGAGCGCCTTGCCGTCCTGCCGGAAAGCACCAAGCT
CTATCCGGGACATGGACCATCCTCGACCATTGCCATCGAGCTGTTCAGCAACCCCTTCCTCAGGAGGGGGTGA

Upstream 100 bases:

>100_bases
GAACGCCTGACCAGGATACAACCATTGCACTAATTCTGGCATCCTGGCAGCAGGTGCCAGGAAGTCAGCGACAGAATCAC
GACAGACGGGAAGGAAAGAC

Downstream 100 bases:

>100_bases
GACACCGGGCAACAGCGGAGACGGATACGACACAGGGGCCTGCCAGCGCAGCCCCCTGTTCATTCACGACCTCCACCGGG
CGATCACATGGCGTGGGGGA

Product: beta-lactamase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MIIETIPVGPLQVNGYILGCERSREGVVIDAGGDVDRLLARITKLELSIRYLLDTHGHFDHVGGNRAFLKATGAKFLIHE
RDAFLLSMAADAGRSFGVLTENSPQPDQYLTDGMTISFGDQRLKVIHTPGHSPGGCCFYSMSTGVLFTGDTLFNGSVGRT
DLPGGSMEVLTRSIRERLAVLPESTKLYPGHGPSSTIAIELFSNPFLRRG

Sequences:

>Translated_210_residues
MIIETIPVGPLQVNGYILGCERSREGVVIDAGGDVDRLLARITKLELSIRYLLDTHGHFDHVGGNRAFLKATGAKFLIHE
RDAFLLSMAADAGRSFGVLTENSPQPDQYLTDGMTISFGDQRLKVIHTPGHSPGGCCFYSMSTGVLFTGDTLFNGSVGRT
DLPGGSMEVLTRSIRERLAVLPESTKLYPGHGPSSTIAIELFSNPFLRRG
>Mature_210_residues
MIIETIPVGPLQVNGYILGCERSREGVVIDAGGDVDRLLARITKLELSIRYLLDTHGHFDHVGGNRAFLKATGAKFLIHE
RDAFLLSMAADAGRSFGVLTENSPQPDQYLTDGMTISFGDQRLKVIHTPGHSPGGCCFYSMSTGVLFTGDTLFNGSVGRT
DLPGGSMEVLTRSIRERLAVLPESTKLYPGHGPSSTIAIELFSNPFLRRG

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]

Homologues:

Organism=Homo sapiens, GI41327741, Length=197, Percent_Identity=30.9644670050761, Blast_Score=77, Evalue=1e-14,
Organism=Escherichia coli, GI1787158, Length=209, Percent_Identity=35.8851674641148, Blast_Score=142, Evalue=1e-35,
Organism=Caenorhabditis elegans, GI17538952, Length=199, Percent_Identity=30.6532663316583, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17536925, Length=180, Percent_Identity=28.8888888888889, Blast_Score=66, Evalue=1e-11,
Organism=Drosophila melanogaster, GI221330176, Length=199, Percent_Identity=28.643216080402, Blast_Score=82, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24667711, Length=197, Percent_Identity=28.4263959390863, Blast_Score=77, Evalue=7e-15,
Organism=Drosophila melanogaster, GI21356335, Length=197, Percent_Identity=28.4263959390863, Blast_Score=77, Evalue=9e-15,
Organism=Drosophila melanogaster, GI24667703, Length=197, Percent_Identity=28.4263959390863, Blast_Score=77, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 22737; Mature: 22737

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: PS01137 TATD_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIETIPVGPLQVNGYILGCERSREGVVIDAGGDVDRLLARITKLELSIRYLLDTHGHFD
CEEEECCCCCEEECCEEEEECCCCCCEEEECCCCHHHHHHHHHHHHEEEEEEEECCCCEE
HVGGNRAFLKATGAKFLIHERDAFLLSMAADAGRSFGVLTENSPQPDQYLTDGMTISFGD
CCCCCEEEEEECCCEEEEEECCEEEEEEECCCCCEEEEEECCCCCCHHHHHCCEEEEECC
QRLKVIHTPGHSPGGCCFYSMSTGVLFTGDTLFNGSVGRTDLPGGSMEVLTRSIRERLAV
CEEEEEECCCCCCCCEEEEEECCCEEEECCEEECCCCCCCCCCCCHHHHHHHHHHHHHHC
LPESTKLYPGHGPSSTIAIELFSNPFLRRG
CCCCCEECCCCCCCCEEEEEEECCCCCCCC
>Mature Secondary Structure
MIIETIPVGPLQVNGYILGCERSREGVVIDAGGDVDRLLARITKLELSIRYLLDTHGHFD
CEEEECCCCCEEECCEEEEECCCCCCEEEECCCCHHHHHHHHHHHHEEEEEEEECCCCEE
HVGGNRAFLKATGAKFLIHERDAFLLSMAADAGRSFGVLTENSPQPDQYLTDGMTISFGD
CCCCCEEEEEECCCEEEEEECCEEEEEEECCCCCEEEEEECCCCCCHHHHHCCEEEEECC
QRLKVIHTPGHSPGGCCFYSMSTGVLFTGDTLFNGSVGRTDLPGGSMEVLTRSIRERLAV
CEEEEEECCCCCCCCEEEEEECCCEEEECCEEECCCCCCCCCCCCHHHHHHHHHHHHHHC
LPESTKLYPGHGPSSTIAIELFSNPFLRRG
CCCCCEECCCCCCCCEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]