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The map label for this gene is secY [H]

Identifier: 118579139

GI number: 118579139

Start: 731325

End: 732632

Strand: Direct

Name: secY [H]

Synonym: Ppro_0700

Alternate gene names: 118579139

Gene position: 731325-732632 (Clockwise)

Preceding gene: 118579138

Following gene: 118579140

Centisome position: 18.25

GC content: 44.65

Gene sequence:

>1308_bases
GTGCTCGATGCACTAAGGAATATTTTTAGGATTCCAGAGCTAAAAAAGAGAGTTTTGTTTTCTCTGGCAATGCTCGCGGT
CTATCGGATAGGGTGCCATATTCCTACCCCTGGTATAGACCGCATGGCATTGTCACATTTTTTTAAACAGGCCCAGGGAA
CGCTGCTTGGTCTGTTTGATATGTTTTCAGGTGGCGCGTTAGAGAGGCTTTCCGTATTTGCTCTTGGAATAATGCCTTAT
ATCTCTTCATCGATTATTTTTCAGCTGTTGACTGTTGTTGTTCCTGCAATAGAGAAGTTGTCGAAAGAAGGCGAGTCGGG
ACGCAAGAAGATCATTCAGTATACGCGATATGGAACCATAGTACTGAGTATCGTTCAGGGGCTTGGTATTGCCGTAGGGC
TTGAAAGTATGCGCGGTCCCGCAGGAGAGTTAGTCGTACCCACTCCTGGATGGTCTTTTCGTTTGATGACGGTTCTGACG
CTAACAGCTGGGACTGCGTTCATCATGTGGTTGGGCGAACAGATGTCAGAAAGGGGGATTGGTAACGGAATTTCCCTGAT
CATATTTGCCGGCATAGTCGTGCGGATTCCTACTGCTCTCGGGAATACATGGAAGCTGCTGGGAGCTGGACAGCTTTCGC
TTTTTGTTATTCTCTTCATCGTTGCGTTTATGTTCGCTGTGATTGCTGGAATTGTGTTCGTTGAACGTGGTCAGAGGCGA
TTGCCAATCCATTACGCAAAAAGGGTTACAGGTCTTAAGACATACAATGCGCAATCATCTCACTTGCCGTTGAAGGTCAA
CATGGCTGGTGTAATTCCTCCCATTTTCGCGTCTTCGATTATTATGTTCCCCGCGACTATAGCCAATTTTATTAATGTAC
CGTGGGTACAAAACATTGCAAAGAGTCTCATGCCGGGGCACTGGGCCTATAATGTTTTTTTCGTTGCCTTTATAGTCTTT
TTTTGCTATTTCTACACGGCTGTGACATTCAATCCTGTGGATGTCGCTGAAAATATAAAAAAACATGGTGGGTATATACC
AGGTATTCGGCCTGGAAAAGAGACATCTGATTTCATGGATTCGGTGCTGACTAAGTTGACCTTCGCCGGAGCAATATATA
TTTCAGTAGTGTGTGTCCTTCCGTCCATCCTAATTGGTAAGTTTAATCTACCATTTTACTTTGGTGGTACGGGTCTTCTT
ATCGCTATTGGCGTTGGGATGGATACTGTTTCGCAGATAGAATCTCATTTGATTACGCGAAGCTATGAAGGTTTTATGAA
GGGTGTTCGAATTCGAGGAAGAAGGTAA

Upstream 100 bases:

>100_bases
GAGATCTTGCTAAATCACTTCGCGTTTCTGCCTCTAAATTCAGTCAGTCAGCAAAGGATAAAATCCTTGCTGCTGGCGGA
ACAGTTGAGGAGACGGTCTA

Downstream 100 bases:

>100_bases
TGAACGTAATACTTTTTGGCCCTCCGGGGGCTGGTAAAGGCACTCAGGCTCAGTATGTTGTAGAACGATTTGGGATTCCT
CAAATATCTACCGGTGATAT

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 435; Mature: 435

Protein sequence:

>435_residues
MLDALRNIFRIPELKKRVLFSLAMLAVYRIGCHIPTPGIDRMALSHFFKQAQGTLLGLFDMFSGGALERLSVFALGIMPY
ISSSIIFQLLTVVVPAIEKLSKEGESGRKKIIQYTRYGTIVLSIVQGLGIAVGLESMRGPAGELVVPTPGWSFRLMTVLT
LTAGTAFIMWLGEQMSERGIGNGISLIIFAGIVVRIPTALGNTWKLLGAGQLSLFVILFIVAFMFAVIAGIVFVERGQRR
LPIHYAKRVTGLKTYNAQSSHLPLKVNMAGVIPPIFASSIIMFPATIANFINVPWVQNIAKSLMPGHWAYNVFFVAFIVF
FCYFYTAVTFNPVDVAENIKKHGGYIPGIRPGKETSDFMDSVLTKLTFAGAIYISVVCVLPSILIGKFNLPFYFGGTGLL
IAIGVGMDTVSQIESHLITRSYEGFMKGVRIRGRR

Sequences:

>Translated_435_residues
MLDALRNIFRIPELKKRVLFSLAMLAVYRIGCHIPTPGIDRMALSHFFKQAQGTLLGLFDMFSGGALERLSVFALGIMPY
ISSSIIFQLLTVVVPAIEKLSKEGESGRKKIIQYTRYGTIVLSIVQGLGIAVGLESMRGPAGELVVPTPGWSFRLMTVLT
LTAGTAFIMWLGEQMSERGIGNGISLIIFAGIVVRIPTALGNTWKLLGAGQLSLFVILFIVAFMFAVIAGIVFVERGQRR
LPIHYAKRVTGLKTYNAQSSHLPLKVNMAGVIPPIFASSIIMFPATIANFINVPWVQNIAKSLMPGHWAYNVFFVAFIVF
FCYFYTAVTFNPVDVAENIKKHGGYIPGIRPGKETSDFMDSVLTKLTFAGAIYISVVCVLPSILIGKFNLPFYFGGTGLL
IAIGVGMDTVSQIESHLITRSYEGFMKGVRIRGRR
>Mature_435_residues
MLDALRNIFRIPELKKRVLFSLAMLAVYRIGCHIPTPGIDRMALSHFFKQAQGTLLGLFDMFSGGALERLSVFALGIMPY
ISSSIIFQLLTVVVPAIEKLSKEGESGRKKIIQYTRYGTIVLSIVQGLGIAVGLESMRGPAGELVVPTPGWSFRLMTVLT
LTAGTAFIMWLGEQMSERGIGNGISLIIFAGIVVRIPTALGNTWKLLGAGQLSLFVILFIVAFMFAVIAGIVFVERGQRR
LPIHYAKRVTGLKTYNAQSSHLPLKVNMAGVIPPIFASSIIMFPATIANFINVPWVQNIAKSLMPGHWAYNVFFVAFIVF
FCYFYTAVTFNPVDVAENIKKHGGYIPGIRPGKETSDFMDSVLTKLTFAGAIYISVVCVLPSILIGKFNLPFYFGGTGLL
IAIGVGMDTVSQIESHLITRSYEGFMKGVRIRGRR

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=425, Percent_Identity=52.2352941176471, Blast_Score=410, Evalue=1e-116,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 47751; Mature: 47751

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHCCCCCCCC
>Mature Secondary Structure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HHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]