| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is trpH [H]
Identifier: 118579101
GI number: 118579101
Start: 700773
End: 701657
Strand: Reverse
Name: trpH [H]
Synonym: Ppro_0662
Alternate gene names: 118579101
Gene position: 701657-700773 (Counterclockwise)
Preceding gene: 118579147
Following gene: 118579099
Centisome position: 17.51
GC content: 60.0
Gene sequence:
>885_bases ATGCGCTCCATGATTGCATCTACGCCAGGTTACATCGATCTGCACGTCCACTCGAACTGCTCGGACGGCGCACTCTCCCC CGCAGCGCTGGTAGAAGAGGCCAAACGGCTTGAATTGTCAACCATAGCCATCGCCGACCATGACTCCATAGTCGCTGTGG ACCAGGCGGCGCACTGCGCCGTTCTGAGGGGTATCGAACTGATGCCCGCAGTGGAATTGTCCGTGCAGTACGGGATACTC AAGGATGTTCACCTGTTGGGGTATGGAGTGGACCATACCGACGCTGATTTCCGGTCAACATTGAATGCCTTTCGCCAGCA CAGGGAACGCCGCAACGAGGAGATGCTGGCCATGATCAACCAGCGCCTGATTCACGAAGGACGCATGACCATAGCTCTCG ACGAGGTTCTCTCCCATGCCGGGGACGCCATCGGACGGCCCCACATCGCCCGCGCCCTTCTGGAGCGAGGCTACGCCAAG AGCGTTGAGGACTCATTCCGGCGCTACCTGACCCCCTGCAACGTCCCCAAGAACTACTGGCCCATGGAGGAGGCCATTCC CGAGATTCGACGATTGGGTGGCGTCTCGGTCCTGGCTCATCCGACCTCCATTTCCCAGGACATGGCCGAACTATGGCGCA TTATCACGGAACTGCACCACCTGGGCCTCGACGGCATCGAGGTTTTCAACAATCAGGCGCAAGCAGACGAAATGGAATTT TTGCGGCGACGCGCAGAAGAGGCAGGACTGTTGCTGACCGGCGGGTCTGATTATCACGGCATCGAGGCAGGTCAGGAAAT GGGAAGGGGACGGGGAGGCATACGCTTCAGCGCGCGCCTCCTCGCCCCCCTCAGGGAACGCCTGGCACAGCGACGACTGA GGTAG
Upstream 100 bases:
>100_bases ATCACTCGGTGAATTTCATCGACTTTCATGTGGGCATGCTAGCCCAACACAGGATGGCAGCGCAAGAGATGGTTTTACTT TTGCACGGCGTGCGGCTAGT
Downstream 100 bases:
>100_bases CATCCTCAGCACCGCCGTCGTTTTCAGGCCAGATTCCTAGCTCTTGTCCCGGTAGGCATCGTAGTTGACCACCTGGATAT CCTCTTCCACGTTTGTGACC
Product: phosphotransferase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MRSMIASTPGYIDLHVHSNCSDGALSPAALVEEAKRLELSTIAIADHDSIVAVDQAAHCAVLRGIELMPAVELSVQYGIL KDVHLLGYGVDHTDADFRSTLNAFRQHRERRNEEMLAMINQRLIHEGRMTIALDEVLSHAGDAIGRPHIARALLERGYAK SVEDSFRRYLTPCNVPKNYWPMEEAIPEIRRLGGVSVLAHPTSISQDMAELWRIITELHHLGLDGIEVFNNQAQADEMEF LRRRAEEAGLLLTGGSDYHGIEAGQEMGRGRGGIRFSARLLAPLRERLAQRRLR
Sequences:
>Translated_294_residues MRSMIASTPGYIDLHVHSNCSDGALSPAALVEEAKRLELSTIAIADHDSIVAVDQAAHCAVLRGIELMPAVELSVQYGIL KDVHLLGYGVDHTDADFRSTLNAFRQHRERRNEEMLAMINQRLIHEGRMTIALDEVLSHAGDAIGRPHIARALLERGYAK SVEDSFRRYLTPCNVPKNYWPMEEAIPEIRRLGGVSVLAHPTSISQDMAELWRIITELHHLGLDGIEVFNNQAQADEMEF LRRRAEEAGLLLTGGSDYHGIEAGQEMGRGRGGIRFSARLLAPLRERLAQRRLR >Mature_294_residues MRSMIASTPGYIDLHVHSNCSDGALSPAALVEEAKRLELSTIAIADHDSIVAVDQAAHCAVLRGIELMPAVELSVQYGIL KDVHLLGYGVDHTDADFRSTLNAFRQHRERRNEEMLAMINQRLIHEGRMTIALDEVLSHAGDAIGRPHIARALLERGYAK SVEDSFRRYLTPCNVPKNYWPMEEAIPEIRRLGGVSVLAHPTSISQDMAELWRIITELHHLGLDGIEVFNNQAQADEMEF LRRRAEEAGLLLTGGSDYHGIEAGQEMGRGRGGIRFSARLLAPLRERLAQRRLR
Specific function: Unknown
COG id: COG0613
COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trpH family [H]
Homologues:
Organism=Escherichia coli, GI1787520, Length=263, Percent_Identity=33.4600760456274, Blast_Score=108, Evalue=4e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004013 - InterPro: IPR003141 - InterPro: IPR016195 [H]
Pfam domain/function: PF02811 PHP [H]
EC number: NA
Molecular weight: Translated: 32837; Mature: 32837
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSMIASTPGYIDLHVHSNCSDGALSPAALVEEAKRLELSTIAIADHDSIVAVDQAAHCA CCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCEEEECHHHHHH VLRGIELMPAVELSVQYGILKDVHLLGYGVDHTDADFRSTLNAFRQHRERRNEEMLAMIN HHHCCHHCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QRLIHEGRMTIALDEVLSHAGDAIGRPHIARALLERGYAKSVEDSFRRYLTPCNVPKNYW HHHHHCCCCEEHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCC PMEEAIPEIRRLGGVSVLAHPTSISQDMAELWRIITELHHLGLDGIEVFNNQAQADEMEF CHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHH LRRRAEEAGLLLTGGSDYHGIEAGQEMGRGRGGIRFSARLLAPLRERLAQRRLR HHHHHHHCCEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRSMIASTPGYIDLHVHSNCSDGALSPAALVEEAKRLELSTIAIADHDSIVAVDQAAHCA CCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCEEEECHHHHHH VLRGIELMPAVELSVQYGILKDVHLLGYGVDHTDADFRSTLNAFRQHRERRNEEMLAMIN HHHCCHHCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QRLIHEGRMTIALDEVLSHAGDAIGRPHIARALLERGYAKSVEDSFRRYLTPCNVPKNYW HHHHHCCCCEEHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCC PMEEAIPEIRRLGGVSVLAHPTSISQDMAELWRIITELHHLGLDGIEVFNNQAQADEMEF CHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHH LRRRAEEAGLLLTGGSDYHGIEAGQEMGRGRGGIRFSARLLAPLRERLAQRRLR HHHHHHHCCEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]