| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118579100
Identifier: 118579100
GI number: 118579100
Start: 699909
End: 700736
Strand: Direct
Name: 118579100
Synonym: Ppro_0661
Alternate gene names: NA
Gene position: 699909-700736 (Clockwise)
Preceding gene: 118579098
Following gene: 118579102
Centisome position: 17.46
GC content: 55.68
Gene sequence:
>828_bases ATGGCAATCATCACAATATCGCGGCAAATGGGTACAGGCGCCTATCAGATCGCTACGGAAGTAGCCAAAAAACTCAAATT TACCTTCGTGGATGGAGATTTGATCACAGCCAGTGCTCCTAAATACGGGCTTTCGCCCGAAATGCTCCAGATGGTGGATG AGAAACCCCCTTCGTACAACACCATCGAGGACCGCAAGCGCGCCGCGGCCTTGAATACGATCGAGTTGATCCTGCTGGAT TATGCCCGCAAGGGTAACGTTATTCTCTACGGCCGCGGCTGCCAGTACCTGTTGAAGGAGTGTGGCAATGTGCTGCGTCT TCGCGTCATCGCCGACTTTGAGGACCGGGTGGAGCGCTTTGCCGAGCGGGAGTGGATCGACCCTGATCTGGCGCGCTCCA TGACGCGCCGCAGCGACCACCAGCGCCATGGTTTCATCCACTTCTACTTCAACCGCCCTTGGGACGATCCGCTTGGCTAT GACGTGACCTTCAATACCTCGCGCCTCTCACCGGAGTCGGTTGTGGAGAGCATCGTGGTCGCAGCCAAGGATCCCTATCT GAAGGAGGCCGAGGCTGCTGCCCTGCCGCTGATCGATAACGCCATCATGACAACCAAAATCAAGATCGCGCTGCTTAATG CCATGGATCTGGACTACCGTCCCTTCACTATCGTTGTCGAGGGGGGGGATGTCTCTCTCAGCGGTTACCTCACCTCCGAA GAAGAGAAAAAGAGCGCTATCAGGGTCGTTAAATCGGTCAAGGGGGTCACAAACGTGGAAGAGGATATCCAGGTGGTCAA CTACGATGCCTACCGGGACAAGAGCTAG
Upstream 100 bases:
>100_bases GTGGTGTCCGGCAAGAGTATCATTACGACCTTGTGTGTACAACCGCTACATGATATATAGCGAGCGCACTTGCGTACCGT AAACTTGCAGGAGGGTGGTA
Downstream 100 bases:
>100_bases GAATCTGGCCTGAAAACGACGGCGGTGCTGAGGATGCTACCTCAGTCGTCGCTGTGCCAGGCGTTCCCTGAGGGGGGCGA GGAGGCGCGCGCTGAAGCGT
Product: transport-associated protein
Products: NA
Alternate protein names: Transport-Associated Protein; Response Regulator Receiver Protein; Cytoplasmic Protein; Cytidylate Kinase Putative; Transport-Associated Domain Protein; Bon Domain-Containing Protein
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MAIITISRQMGTGAYQIATEVAKKLKFTFVDGDLITASAPKYGLSPEMLQMVDEKPPSYNTIEDRKRAAALNTIELILLD YARKGNVILYGRGCQYLLKECGNVLRLRVIADFEDRVERFAEREWIDPDLARSMTRRSDHQRHGFIHFYFNRPWDDPLGY DVTFNTSRLSPESVVESIVVAAKDPYLKEAEAAALPLIDNAIMTTKIKIALLNAMDLDYRPFTIVVEGGDVSLSGYLTSE EEKKSAIRVVKSVKGVTNVEEDIQVVNYDAYRDKS
Sequences:
>Translated_275_residues MAIITISRQMGTGAYQIATEVAKKLKFTFVDGDLITASAPKYGLSPEMLQMVDEKPPSYNTIEDRKRAAALNTIELILLD YARKGNVILYGRGCQYLLKECGNVLRLRVIADFEDRVERFAEREWIDPDLARSMTRRSDHQRHGFIHFYFNRPWDDPLGY DVTFNTSRLSPESVVESIVVAAKDPYLKEAEAAALPLIDNAIMTTKIKIALLNAMDLDYRPFTIVVEGGDVSLSGYLTSE EEKKSAIRVVKSVKGVTNVEEDIQVVNYDAYRDKS >Mature_274_residues AIITISRQMGTGAYQIATEVAKKLKFTFVDGDLITASAPKYGLSPEMLQMVDEKPPSYNTIEDRKRAAALNTIELILLDY ARKGNVILYGRGCQYLLKECGNVLRLRVIADFEDRVERFAEREWIDPDLARSMTRRSDHQRHGFIHFYFNRPWDDPLGYD VTFNTSRLSPESVVESIVVAAKDPYLKEAEAAALPLIDNAIMTTKIKIALLNAMDLDYRPFTIVVEGGDVSLSGYLTSEE EKKSAIRVVKSVKGVTNVEEDIQVVNYDAYRDKS
Specific function: Unknown
COG id: COG1102
COG function: function code F; Cytidylate kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31071; Mature: 30940
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: PS50914 BON
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIITISRQMGTGAYQIATEVAKKLKFTFVDGDLITASAPKYGLSPEMLQMVDEKPPSYN CEEEEEECCCCCCHHHHHHHHHHHEEEEEECCCEEEECCCCCCCCHHHHHHHHCCCCCCC TIEDRKRAAALNTIELILLDYARKGNVILYGRGCQYLLKECGNVLRLRVIADFEDRVERF CHHHHHHHHHHHHHEEEEEECCCCCCEEEEECCHHHHHHHCCCEEEEEEEECHHHHHHHH AEREWIDPDLARSMTRRSDHQRHGFIHFYFNRPWDDPLGYDVTFNTSRLSPESVVESIVV HHHCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHH AAKDPYLKEAEAAALPLIDNAIMTTKIKIALLNAMDLDYRPFTIVVEGGDVSLSGYLTSE HCCCCCHHCHHHHHCCHHCCCEEHEEEEEEEEEEECCCCCCEEEEEECCCEEEEEEECCC EEKKSAIRVVKSVKGVTNVEEDIQVVNYDAYRDKS HHHHHHHHHHHHHHCCCCCCHHHEEEEECCCCCCC >Mature Secondary Structure AIITISRQMGTGAYQIATEVAKKLKFTFVDGDLITASAPKYGLSPEMLQMVDEKPPSYN EEEEEECCCCCCHHHHHHHHHHHEEEEEECCCEEEECCCCCCCCHHHHHHHHCCCCCCC TIEDRKRAAALNTIELILLDYARKGNVILYGRGCQYLLKECGNVLRLRVIADFEDRVERF CHHHHHHHHHHHHHEEEEEECCCCCCEEEEECCHHHHHHHCCCEEEEEEEECHHHHHHHH AEREWIDPDLARSMTRRSDHQRHGFIHFYFNRPWDDPLGYDVTFNTSRLSPESVVESIVV HHHCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHH AAKDPYLKEAEAAALPLIDNAIMTTKIKIALLNAMDLDYRPFTIVVEGGDVSLSGYLTSE HCCCCCHHCHHHHHCCHHCCCEEHEEEEEEEEEEECCCCCCEEEEEECCCEEEEEEECCC EEKKSAIRVVKSVKGVTNVEEDIQVVNYDAYRDKS HHHHHHHHHHHHHHCCCCCCHHHEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA