Definition Pelobacter propionicus DSM 2379 chromosome, complete genome.
Accession NC_008609
Length 4,008,000

Click here to switch to the map view.

The map label for this gene is 118579015

Identifier: 118579015

GI number: 118579015

Start: 611161

End: 611568

Strand: Reverse

Name: 118579015

Synonym: Ppro_0576

Alternate gene names: NA

Gene position: 611568-611161 (Counterclockwise)

Preceding gene: 118579016

Following gene: 118579014

Centisome position: 15.26

GC content: 33.58

Gene sequence:

>408_bases
TTGTCTGCTTATAACTGGCTTAGAGTTGAAGCTACTATTATATCGAACTCCATCTATGAAACCCATGCTCGAAACGGAAC
TCTATGGTGTCCAGACTGGAGTTATTCCTATGAAGTTATTGGAATAAGATATGAAAGCAACAAAATGGAACCAACAATTA
CTACAAGCCTCCATTGCTTTTCTAACAAATATGAGGCTGAAGATAATATCAATAATTTACAAGTTGGCTCAAAGGTTATT
GCTTATTACAACCCAAACAACCCATCACAATCTGCTATAATAGTTACTAAAGTTGGAGTATTGGAGTTTTTATTACTTTT
TTCAGGATTCCTTTTACTTTTTACTGGCATACTCATCTGTAAAGAAGCTATCAAACACAAAAATAACACAACAAAATCAA
ACGCTTAA

Upstream 100 bases:

>100_bases
TGCTGCTTTATATTGGGTTCTGACAACACTATTACTCACTATCACCTTTTTCTTCGGATTAGCATTCATTACGTTTGGTG
CCTACGAAGCGCACAAAAAG

Downstream 100 bases:

>100_bases
AAACATGTTCAACCACAGCATTACCAACCTTAACAGGCCTTTAAAAAACAAATAGAGAAAAGTCACGATTTGGAACCAAC
TGTGGGGTCAGACATTGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MSAYNWLRVEATIISNSIYETHARNGTLWCPDWSYSYEVIGIRYESNKMEPTITTSLHCFSNKYEAEDNINNLQVGSKVI
AYYNPNNPSQSAIIVTKVGVLEFLLLFSGFLLLFTGILICKEAIKHKNNTTKSNA

Sequences:

>Translated_135_residues
MSAYNWLRVEATIISNSIYETHARNGTLWCPDWSYSYEVIGIRYESNKMEPTITTSLHCFSNKYEAEDNINNLQVGSKVI
AYYNPNNPSQSAIIVTKVGVLEFLLLFSGFLLLFTGILICKEAIKHKNNTTKSNA
>Mature_134_residues
SAYNWLRVEATIISNSIYETHARNGTLWCPDWSYSYEVIGIRYESNKMEPTITTSLHCFSNKYEAEDNINNLQVGSKVIA
YYNPNNPSQSAIIVTKVGVLEFLLLFSGFLLLFTGILICKEAIKHKNNTTKSNA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15307; Mature: 15175

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAYNWLRVEATIISNSIYETHARNGTLWCPDWSYSYEVIGIRYESNKMEPTITTSLHCF
CCCCCEEEEEEEEECCCHHHHHCCCCCEECCCCCCCEEEEEEEECCCCCCCEEEEEEEEC
SNKYEAEDNINNLQVGSKVIAYYNPNNPSQSAIIVTKVGVLEFLLLFSGFLLLFTGILIC
CCCCCCCCCCCEEEECCEEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
KEAIKHKNNTTKSNA
HHHHHCCCCCCCCCC
>Mature Secondary Structure 
SAYNWLRVEATIISNSIYETHARNGTLWCPDWSYSYEVIGIRYESNKMEPTITTSLHCF
CCCCEEEEEEEEECCCHHHHHCCCCCEECCCCCCCEEEEEEEECCCCCCCEEEEEEEEC
SNKYEAEDNINNLQVGSKVIAYYNPNNPSQSAIIVTKVGVLEFLLLFSGFLLLFTGILIC
CCCCCCCCCCCEEEECCEEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
KEAIKHKNNTTKSNA
HHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA