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The map label for this gene is 118579007

Identifier: 118579007

GI number: 118579007

Start: 604213

End: 604962

Strand: Reverse

Name: 118579007

Synonym: Ppro_0568

Alternate gene names: NA

Gene position: 604962-604213 (Counterclockwise)

Preceding gene: 118579008

Following gene: 118579003

Centisome position: 15.09

GC content: 62.13

Gene sequence:

>750_bases
GTGCCGGTGGAACGAAACAGCACCATGATACCGCTCCGAGACTACCGCCCCACCCGCAGCTTTCCGTTGATGACGGTCAT
GCTGATCGCCCTCAACATCGCGGTGTTCCTTCAGGACCGCCTCGGCGGACACTACACGCTGGTGCAGGTGAATACCGGCC
AGGGGATCGTCCTGGCCAGGGAGTTCGTGGGCGGCCTCACGAGCCACTTCTCCCTCGTGCCGAGCGATCTCGTCTCCCAC
CCCCTGCTGGCATGGCCGACCATCTTCACCTCCATGTTCCTGCACGGAAACTGGCTGCACATCGGTTCCAACATGCTGTT
CCTGTGGGTATTCGGCGACAACATCGAGGACACCCTCGGCCGCCTGCGCTTCAGCGTCTTCTATCTCCTCTGCGGCTTGG
CCGCGGCACTTGTCCAGATCCTGAGCGACCCGGCTTCAACCATCCCCATGGTCGGGGCCAGCGGCGCCGTGGCGGGGGTG
CTGGGCGCCTACCTGCTGCTCTTCCCCCACAACCGGGTCCTCACCCTGATCCCCCTGTTCATCTTTTTCACCACCGTCGA
GCTCCCCGCCTACCTGATTATCGGCTACTGGGCACTGCTCCAGTTCCTCAACGCCTATCTCCTGAAGGGTGGAGGGATGT
TGCGGGGCGGCGGAGTGGCCTATTTCGCCCACATCGGCGGATTTGTGGCAGGAATTATCCTGATCATGCTTCTGAAAGGG
AGCACACGTCACGGAACAGGGAGGAGATGA

Upstream 100 bases:

>100_bases
TCAGGCCCAGCCAGGCCCTCCCCTCCCGTAACGGAGTCACCTCCATGATGAAGCATGCACCTTCCAGATCTCCGATCGGC
CCCGTCAGGTTTTCCCTGCC

Downstream 100 bases:

>100_bases
GACAGGAAAGAGCAGGAGCAGTCGCCGCGCCGCCGCGACAACACCATTCATCCCTTACGGCAGAGAACACAAAAAACGGA
GAAAGGCGTCCCTGAGCGGG

Product: rhomboid family protein

Products: NA

Alternate protein names: Integral Membrane Protein; Peptidase; Rhomboid-Like Protein; S54 Family Peptidase; Peptidase Protein; Rhomboid Family Transmembrane Protein; LOW QUALITY PROTEIN Integral Membrane Protein; Transmembrane Rhomboid Family Protein; Subfamily; Rhomboid Serine Protease; Rhomboid Family Membrane Protein; Membrane Associated Serine Protease; Integral Membrane Rhomboid Family Protein; Regulatory Proteins IclR

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MPVERNSTMIPLRDYRPTRSFPLMTVMLIALNIAVFLQDRLGGHYTLVQVNTGQGIVLAREFVGGLTSHFSLVPSDLVSH
PLLAWPTIFTSMFLHGNWLHIGSNMLFLWVFGDNIEDTLGRLRFSVFYLLCGLAAALVQILSDPASTIPMVGASGAVAGV
LGAYLLLFPHNRVLTLIPLFIFFTTVELPAYLIIGYWALLQFLNAYLLKGGGMLRGGGVAYFAHIGGFVAGIILIMLLKG
STRHGTGRR

Sequences:

>Translated_249_residues
MPVERNSTMIPLRDYRPTRSFPLMTVMLIALNIAVFLQDRLGGHYTLVQVNTGQGIVLAREFVGGLTSHFSLVPSDLVSH
PLLAWPTIFTSMFLHGNWLHIGSNMLFLWVFGDNIEDTLGRLRFSVFYLLCGLAAALVQILSDPASTIPMVGASGAVAGV
LGAYLLLFPHNRVLTLIPLFIFFTTVELPAYLIIGYWALLQFLNAYLLKGGGMLRGGGVAYFAHIGGFVAGIILIMLLKG
STRHGTGRR
>Mature_248_residues
PVERNSTMIPLRDYRPTRSFPLMTVMLIALNIAVFLQDRLGGHYTLVQVNTGQGIVLAREFVGGLTSHFSLVPSDLVSHP
LLAWPTIFTSMFLHGNWLHIGSNMLFLWVFGDNIEDTLGRLRFSVFYLLCGLAAALVQILSDPASTIPMVGASGAVAGVL
GAYLLLFPHNRVLTLIPLFIFFTTVELPAYLIIGYWALLQFLNAYLLKGGGMLRGGGVAYFAHIGGFVAGIILIMLLKGS
TRHGTGRR

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6321538, Length=186, Percent_Identity=31.1827956989247, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27250; Mature: 27119

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVERNSTMIPLRDYRPTRSFPLMTVMLIALNIAVFLQDRLGGHYTLVQVNTGQGIVLAR
CCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEHH
EFVGGLTSHFSLVPSDLVSHPLLAWPTIFTSMFLHGNWLHIGSNMLFLWVFGDNIEDTLG
HHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHCCCEEEECCCEEEEEEECCCHHHHHH
RLRFSVFYLLCGLAAALVQILSDPASTIPMVGASGAVAGVLGAYLLLFPHNRVLTLIPLF
HHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
IFFTTVELPAYLIIGYWALLQFLNAYLLKGGGMLRGGGVAYFAHIGGFVAGIILIMLLKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCC
STRHGTGRR
CCCCCCCCC
>Mature Secondary Structure 
PVERNSTMIPLRDYRPTRSFPLMTVMLIALNIAVFLQDRLGGHYTLVQVNTGQGIVLAR
CCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEHH
EFVGGLTSHFSLVPSDLVSHPLLAWPTIFTSMFLHGNWLHIGSNMLFLWVFGDNIEDTLG
HHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHCCCEEEECCCEEEEEEECCCHHHHHH
RLRFSVFYLLCGLAAALVQILSDPASTIPMVGASGAVAGVLGAYLLLFPHNRVLTLIPLF
HHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
IFFTTVELPAYLIIGYWALLQFLNAYLLKGGGMLRGGGVAYFAHIGGFVAGIILIMLLKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCC
STRHGTGRR
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA