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The map label for this gene is ytqB [H]

Identifier: 118579003

GI number: 118579003

Start: 599851

End: 600441

Strand: Reverse

Name: ytqB [H]

Synonym: Ppro_0564

Alternate gene names: 118579003

Gene position: 600441-599851 (Counterclockwise)

Preceding gene: 118579007

Following gene: 118579002

Centisome position: 14.98

GC content: 65.99

Gene sequence:

>591_bases
ATGCTCCAGCCAGCAACACGAGACACAAGAGCCTTAAGCGGCCCGACCCGGCTCGCGCACCTGTTCATGAGCCAGTTTAT
CCAGCCGGGCGACCTTGCCGTGGACGCCACCTGCGGCAACGGCCATGACACGCTGCTACTGGCCAACCTGGTTGGCCCCT
CCGGCAGGGTCTGGGCCTTCGACGTCCAGGAACGGGCCATCAGCGCCACCAGCCGGAGGCTGGGCCAGGCCGGCATGGCC
GAACGGGTGGAACTGATCCTGGGGGGACACGAATCCCTGGCCGAACAGGTGCCGACGCCGGTCAGGGGAGTGATGTTCAA
CCTGGGCTACCTTCCCGGCGGCGACCGTAGCATCATCACCCGGCCGAAAACAACCCGAACCGCACTGGACCAGGCCCTGA
GTCTGCTCCTGCCCGGCGGCATCCTGGCCGTAACCGCCTACCCCGGCCACGCTGGCGGCGATTGTGAAGAAGAGATGCTC
AGGGAGTGGTCCGCCACCCTCCCCCAGCCTTTGTTCCACGCCTGGCGCATGGGGCAGGTCAACACACCGCCTGGCGCCCC
CTATCTAATTCTGATCCAAAAGGCAGCCTGA

Upstream 100 bases:

>100_bases
TTTCTTGATGATCATGCCCCGTTTCTACCCCCTTGGCGTGGAGGATGCAAATGAATTTCACGGTGGCGAAAGAGGGGCAT
ATCTGCTATCGTGACCAACC

Downstream 100 bases:

>100_bases
TGCTCCGCACCCTGCTCCCTTTCATGACAACGCTGCCTGCGCTGGCCTACTGCCTGATCTCGCTGGTCTGCGCCCGCCGC
TACTTCCGCGCCCCGCGGCA

Product: putative rRNA methylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MLQPATRDTRALSGPTRLAHLFMSQFIQPGDLAVDATCGNGHDTLLLANLVGPSGRVWAFDVQERAISATSRRLGQAGMA
ERVELILGGHESLAEQVPTPVRGVMFNLGYLPGGDRSIITRPKTTRTALDQALSLLLPGGILAVTAYPGHAGGDCEEEML
REWSATLPQPLFHAWRMGQVNTPPGAPYLILIQKAA

Sequences:

>Translated_196_residues
MLQPATRDTRALSGPTRLAHLFMSQFIQPGDLAVDATCGNGHDTLLLANLVGPSGRVWAFDVQERAISATSRRLGQAGMA
ERVELILGGHESLAEQVPTPVRGVMFNLGYLPGGDRSIITRPKTTRTALDQALSLLLPGGILAVTAYPGHAGGDCEEEML
REWSATLPQPLFHAWRMGQVNTPPGAPYLILIQKAA
>Mature_196_residues
MLQPATRDTRALSGPTRLAHLFMSQFIQPGDLAVDATCGNGHDTLLLANLVGPSGRVWAFDVQERAISATSRRLGQAGMA
ERVELILGGHESLAEQVPTPVRGVMFNLGYLPGGDRSIITRPKTTRTALDQALSLLLPGGILAVTAYPGHAGGDCEEEML
REWSATLPQPLFHAWRMGQVNTPPGAPYLILIQKAA

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010719 [H]

Pfam domain/function: PF06962 rRNA_methylase [H]

EC number: NA

Molecular weight: Translated: 21001; Mature: 21001

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQPATRDTRALSGPTRLAHLFMSQFIQPGDLAVDATCGNGHDTLLLANLVGPSGRVWAF
CCCCCCCCCHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEEECCCCCCEEEE
DVQERAISATSRRLGQAGMAERVELILGGHESLAEQVPTPVRGVMFNLGYLPGGDRSIIT
EHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHCCCCHHHHHHHCCCCCCCCCCEEE
RPKTTRTALDQALSLLLPGGILAVTAYPGHAGGDCEEEMLREWSATLPQPLFHAWRMGQV
CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCC
NTPPGAPYLILIQKAA
CCCCCCCEEEEEEECC
>Mature Secondary Structure
MLQPATRDTRALSGPTRLAHLFMSQFIQPGDLAVDATCGNGHDTLLLANLVGPSGRVWAF
CCCCCCCCCHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEEECCCCCCEEEE
DVQERAISATSRRLGQAGMAERVELILGGHESLAEQVPTPVRGVMFNLGYLPGGDRSIIT
EHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHCCCCHHHHHHHCCCCCCCCCCEEE
RPKTTRTALDQALSLLLPGGILAVTAYPGHAGGDCEEEMLREWSATLPQPLFHAWRMGQV
CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCC
NTPPGAPYLILIQKAA
CCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]