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The map label for this gene is yrbE [C]

Identifier: 118579001

GI number: 118579001

Start: 597836

End: 598606

Strand: Reverse

Name: yrbE [C]

Synonym: Ppro_0562

Alternate gene names: 118579001

Gene position: 598606-597836 (Counterclockwise)

Preceding gene: 118579002

Following gene: 118579000

Centisome position: 14.94

GC content: 61.35

Gene sequence:

>771_bases
TTGTCTGCACTGATTCAAGCAATAGGCCATTCAACCATTGGCTCCATACGCGCGCTGGGAAGGATGGGGTGGTTTCTGGT
CCACTCCTTCATCACCATGGTCCGGACACCGGGCAACCCGGTACACGTCCTCAAGCAACTCTCCTTCATCGGCGCGAAAT
CCCTCTTCGTCATCTTCCTGACCGCCGCCTTCACCGGCATGGTACTGGGCCTGCAGGGATACTACACCCTGACCAAGTTC
GGCTCCGAGGGAATGCTGGGCACGGCCGTGGCCCTTTCCCTGATCCGCGAACTGGGACCGGTACTCACGGCGCTGATGGT
GACCGGCCGGGCCGGCAGCGCCATCGCCGCCGAAATCGGCATCATGCGCATCACCGAGCAGATCGATGCCCTGGAAACCA
TGGCGCTGGACCCCTTCAAATACCTGATCACCCCCAAACTCATCGCTGCCATGATCGCCCTGCCGCTCCTGTGCGCCATC
TTCGACACGATCGGCATCTACGGTGGCTGGCTGGTGGGGGTCAAACTGTTGGGGGTCAACCCGGGGGCCTACTTCTCCGA
GATGGAGAAGTCGGTGGTCTGGCGCGACGTCTACTCCGGCTTCGCCAAGTCGTTCTCCTTCGGCGTCATCATCGCCTGGA
TCGGCTGCTATAAGGGGTACTTCGCCGGCCATGGCGCCGAAGGGGTCTCCAAGGCAACCACCGAGGCGGTGGTGCTCACC
TCTGTCCTGATCCTGGTCTGGGACTACTTCCTCACATCGGTGCTCTTGTGA

Upstream 100 bases:

>100_bases
CCCGGATGCACGCCCTGGCCGCTACTGGCCGTTTTCCGCTTTACTTTTGCCAAAAATGTGCAGTATAAATCTGAGTCCGT
ATAATCATTGAGGTATTGTT

Downstream 100 bases:

>100_bases
TCAAACTGACCAACGTGCATAAATCCTTCGGCCCCCAGAAGGTACTGGACGGACTGGATCTCTCCATTCCCGCCGGACAG
ATAACCGCCATCATCGGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MSALIQAIGHSTIGSIRALGRMGWFLVHSFITMVRTPGNPVHVLKQLSFIGAKSLFVIFLTAAFTGMVLGLQGYYTLTKF
GSEGMLGTAVALSLIRELGPVLTALMVTGRAGSAIAAEIGIMRITEQIDALETMALDPFKYLITPKLIAAMIALPLLCAI
FDTIGIYGGWLVGVKLLGVNPGAYFSEMEKSVVWRDVYSGFAKSFSFGVIIAWIGCYKGYFAGHGAEGVSKATTEAVVLT
SVLILVWDYFLTSVLL

Sequences:

>Translated_256_residues
MSALIQAIGHSTIGSIRALGRMGWFLVHSFITMVRTPGNPVHVLKQLSFIGAKSLFVIFLTAAFTGMVLGLQGYYTLTKF
GSEGMLGTAVALSLIRELGPVLTALMVTGRAGSAIAAEIGIMRITEQIDALETMALDPFKYLITPKLIAAMIALPLLCAI
FDTIGIYGGWLVGVKLLGVNPGAYFSEMEKSVVWRDVYSGFAKSFSFGVIIAWIGCYKGYFAGHGAEGVSKATTEAVVLT
SVLILVWDYFLTSVLL
>Mature_255_residues
SALIQAIGHSTIGSIRALGRMGWFLVHSFITMVRTPGNPVHVLKQLSFIGAKSLFVIFLTAAFTGMVLGLQGYYTLTKFG
SEGMLGTAVALSLIRELGPVLTALMVTGRAGSAIAAEIGIMRITEQIDALETMALDPFKYLITPKLIAAMIALPLLCAIF
DTIGIYGGWLVGVKLLGVNPGAYFSEMEKSVVWRDVYSGFAKSFSFGVIIAWIGCYKGYFAGHGAEGVSKATTEAVVLTS
VLILVWDYFLTSVLL

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=252, Percent_Identity=42.4603174603175, Blast_Score=205, Evalue=2e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 27433; Mature: 27302

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SALIQAIGHSTIGSIRALGRMGWFLVHSFITMVRTPGNPVHVLKQLSFIGAKSLFVIFL
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
TAAFTGMVLGLQGYYTLTKFGSEGMLGTAVALSLIRELGPVLTALMVTGRAGSAIAAEIG
HHHHHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
IMRITEQIDALETMALDPFKYLITPKLIAAMIALPLLCAIFDTIGIYGGWLVGVKLLGVN
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PGAYFSEMEKSVVWRDVYSGFAKSFSFGVIIAWIGCYKGYFAGHGAEGVSKATTEAVVLT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
SVLILVWDYFLTSVLL
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA