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The map label for this gene is vacJ [C]

Identifier: 118578998

GI number: 118578998

Start: 595623

End: 596477

Strand: Reverse

Name: vacJ [C]

Synonym: Ppro_0559

Alternate gene names: 118578998

Gene position: 596477-595623 (Counterclockwise)

Preceding gene: 118578999

Following gene: 118578997

Centisome position: 14.88

GC content: 56.61

Gene sequence:

>855_bases
ATGATCGCACGAAGAGTTTATGGATTGCTGCTCGTGGCAGGATTGCTGCTGACAGGCACCGCCATGGCCGAAGAAGCTCC
GGTCCAGCAGGTTGAGCCCCGAACAGCGGAAGAACGTACCCTGCCGACCGAGGCGGCTGCCCCGTCCGGGGAGACTGCCA
GCGACGCCGGACAGCCAAAGCAGCCGCTCTCGGCTACGGACGGAACGGCCGATGATGACGAGTACACCGATAATAACGGC
ATCGAAGAGGTAAGCATTGCTGACCCGATCGAACCGCTGAACCGGTTAATGTTCAAATTCAACGACAAGCTCTATTTCTG
GGCTCTCAAACCGGCAGCACAGGGATACAGCTTTATCGTGCCGGAACCGGCGCGCGTCTCGGTGAAGAACTTTTTCTCGA
ACGTGAAGATGCCCATACGGTTCGTCAACACCCTCCTGCAAGGGAAGTTCGAGGGAGCAAGCACCGAGCTTGCCCGTTTC
TGCATCAATAGCACCATGGGGCTGGCCGGCTTCTTCGATGTCGCCAAGAGCCATTTCGAACTTAACGCCTATGACGAGGA
TTTCGGGCAGACCCTCGGATTCTACGGCATGGGTGGAATGATGTATATCGTCTGGCCGGTCATGGGCCCCTCGACGCTGC
GAGACTCGGTGGGGATGGCGGGCGACTCCGTGCTGAACCCAGCAAGCTACATCACCCCGTTCGGTGCCGCCCTGGGGGTA
AAGGTGTTCGAAGTGGTCAACAAGACATCACTGGAACTGGGTACCTATGAGGACATCATCGCGGCTTCAGTCGAACCTTA
CATCGGTGTGAGGGACGGCTTTATCCAACTCAGAAAAAAACAAATCAACAAATAA

Upstream 100 bases:

>100_bases
CATCGAGGAACTGGTCAGCAAGTTCATCCATGGCAAGGTGGAGTAGCGGGAGCGCCGGAACACAACCGGATGCCCATCAT
ATAAAAAGAGGACAGTTACT

Downstream 100 bases:

>100_bases
GCGGGAGAACACATCATGTTGCAACGCACCTTACTCATTCTGCTGGCCCTTTTCTTCACCACAACCCACGCATTCGCCAC
CCCCACCGACGACGTCAGGA

Product: VacJ family lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MIARRVYGLLLVAGLLLTGTAMAEEAPVQQVEPRTAEERTLPTEAAAPSGETASDAGQPKQPLSATDGTADDDEYTDNNG
IEEVSIADPIEPLNRLMFKFNDKLYFWALKPAAQGYSFIVPEPARVSVKNFFSNVKMPIRFVNTLLQGKFEGASTELARF
CINSTMGLAGFFDVAKSHFELNAYDEDFGQTLGFYGMGGMMYIVWPVMGPSTLRDSVGMAGDSVLNPASYITPFGAALGV
KVFEVVNKTSLELGTYEDIIAASVEPYIGVRDGFIQLRKKQINK

Sequences:

>Translated_284_residues
MIARRVYGLLLVAGLLLTGTAMAEEAPVQQVEPRTAEERTLPTEAAAPSGETASDAGQPKQPLSATDGTADDDEYTDNNG
IEEVSIADPIEPLNRLMFKFNDKLYFWALKPAAQGYSFIVPEPARVSVKNFFSNVKMPIRFVNTLLQGKFEGASTELARF
CINSTMGLAGFFDVAKSHFELNAYDEDFGQTLGFYGMGGMMYIVWPVMGPSTLRDSVGMAGDSVLNPASYITPFGAALGV
KVFEVVNKTSLELGTYEDIIAASVEPYIGVRDGFIQLRKKQINK
>Mature_284_residues
MIARRVYGLLLVAGLLLTGTAMAEEAPVQQVEPRTAEERTLPTEAAAPSGETASDAGQPKQPLSATDGTADDDEYTDNNG
IEEVSIADPIEPLNRLMFKFNDKLYFWALKPAAQGYSFIVPEPARVSVKNFFSNVKMPIRFVNTLLQGKFEGASTELARF
CINSTMGLAGFFDVAKSHFELNAYDEDFGQTLGFYGMGGMMYIVWPVMGPSTLRDSVGMAGDSVLNPASYITPFGAALGV
KVFEVVNKTSLELGTYEDIIAASVEPYIGVRDGFIQLRKKQINK

Specific function: Unknown

COG id: COG2853

COG function: function code M; Surface lipoprotein

Gene ontology:

Cell location: Attached To The Outer Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaA family [H]

Homologues:

Organism=Escherichia coli, GI1788688, Length=202, Percent_Identity=32.6732673267327, Blast_Score=99, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007428 [H]

Pfam domain/function: PF04333 VacJ [H]

EC number: NA

Molecular weight: Translated: 30925; Mature: 30925

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIARRVYGLLLVAGLLLTGTAMAEEAPVQQVEPRTAEERTLPTEAAAPSGETASDAGQPK
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCC
QPLSATDGTADDDEYTDNNGIEEVSIADPIEPLNRLMFKFNDKLYFWALKPAAQGYSFIV
CCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEC
PEPARVSVKNFFSNVKMPIRFVNTLLQGKFEGASTELARFCINSTMGLAGFFDVAKSHFE
CCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHEE
LNAYDEDFGQTLGFYGMGGMMYIVWPVMGPSTLRDSVGMAGDSVLNPASYITPFGAALGV
CCCCHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHCCCCCHHCCCHHHHCHHHHHHHH
KVFEVVNKTSLELGTYEDIIAASVEPYIGVRDGFIQLRKKQINK
HHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MIARRVYGLLLVAGLLLTGTAMAEEAPVQQVEPRTAEERTLPTEAAAPSGETASDAGQPK
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCC
QPLSATDGTADDDEYTDNNGIEEVSIADPIEPLNRLMFKFNDKLYFWALKPAAQGYSFIV
CCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEC
PEPARVSVKNFFSNVKMPIRFVNTLLQGKFEGASTELARFCINSTMGLAGFFDVAKSHFE
CCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHEE
LNAYDEDFGQTLGFYGMGGMMYIVWPVMGPSTLRDSVGMAGDSVLNPASYITPFGAALGV
CCCCHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHCCCCCHHCCCHHHHCHHHHHHHH
KVFEVVNKTSLELGTYEDIIAASVEPYIGVRDGFIQLRKKQINK
HHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA