| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is tsaA [H]
Identifier: 118578922
GI number: 118578922
Start: 504831
End: 505427
Strand: Reverse
Name: tsaA [H]
Synonym: Ppro_0483
Alternate gene names: 118578922
Gene position: 505427-504831 (Counterclockwise)
Preceding gene: 118578928
Following gene: 118578921
Centisome position: 12.61
GC content: 59.46
Gene sequence:
>597_bases ATGAGTTTGACAACCCTGGTCACCCAGCAGGCTCCCGACTTCACCGCCGAGGCGGTCATGGCCGACAATAGCTTCGCCTC CATCACGCTCTCCAGCCTGAAGGGAAAATTTGTCCTGCTGCTCTTCTATCCCCTGGATTTCACCTTCGTCTGCCCGTCCG AGATACTGGCCTTCAACCGACAGATTGCAGCCTTCAAGGCAAAGAACTGCGAGGTGATCGGCATCTCCGTTGACTCCAAG TTCACCCATCTGGCATGGAAGAACACTCCCATCGAAAACGGCGGCATCGGCAACATCCAGTTCCCGCTGGTCCAGGATCT GGACAGGGAGATCGCCAAATCATACGGTATCCTGCTGAACAATTCCGTGGCCCTGCGCGGCCTGTTCCTGATCGACCCGA CGGGGACGGTCAGGCACTGCATCATCAACGACCTGCCCTTGGGGCGGAGCGTCACGGAGGCCATCAGGATGCTCGATGCG ATCCAGTTTTCCGACACCCACGGCGAGGTCTGCCCCGCCAACTGGCAGGAGGGCGAGGAGGCGATGAAACCTACCACCGA GGGGGTTGCCGACTACCTGACCAGATTCGCCCGCTGA
Upstream 100 bases:
>100_bases AAAAAAACAAAGAAGATTGTTTTTATCCTATTGACAAGAGCGCGCGGGACTGATATGTATCGCTCATTCAGCGCAACTAT TCGAAAAAGGAGGATATACC
Downstream 100 bases:
>100_bases CTCGTGGGGCGCGGTCAAGGGACTGCACCCTGTGCGCCATTGCACGCCAAACCTGCGCAGCCACCGTGCCCGGAGCTCCC GAACATCCCAAACTTACTGC
Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
Products: NA
Alternate protein names: 26 kDa antigen; Thioredoxin reductase [H]
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MSLTTLVTQQAPDFTAEAVMADNSFASITLSSLKGKFVLLLFYPLDFTFVCPSEILAFNRQIAAFKAKNCEVIGISVDSK FTHLAWKNTPIENGGIGNIQFPLVQDLDREIAKSYGILLNNSVALRGLFLIDPTGTVRHCIINDLPLGRSVTEAIRMLDA IQFSDTHGEVCPANWQEGEEAMKPTTEGVADYLTRFAR
Sequences:
>Translated_198_residues MSLTTLVTQQAPDFTAEAVMADNSFASITLSSLKGKFVLLLFYPLDFTFVCPSEILAFNRQIAAFKAKNCEVIGISVDSK FTHLAWKNTPIENGGIGNIQFPLVQDLDREIAKSYGILLNNSVALRGLFLIDPTGTVRHCIINDLPLGRSVTEAIRMLDA IQFSDTHGEVCPANWQEGEEAMKPTTEGVADYLTRFAR >Mature_197_residues SLTTLVTQQAPDFTAEAVMADNSFASITLSSLKGKFVLLLFYPLDFTFVCPSEILAFNRQIAAFKAKNCEVIGISVDSKF THLAWKNTPIENGGIGNIQFPLVQDLDREIAKSYGILLNNSVALRGLFLIDPTGTVRHCIINDLPLGRSVTEAIRMLDAI QFSDTHGEVCPANWQEGEEAMKPTTEGVADYLTRFAR
Specific function: Directly Reduces Organic Hydroperoxides In Its Reduced Dithiol Form. [C]
COG id: COG0450
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI4505591, Length=190, Percent_Identity=51.0526315789474, Blast_Score=219, Evalue=1e-57, Organism=Homo sapiens, GI32455266, Length=190, Percent_Identity=51.0526315789474, Blast_Score=219, Evalue=1e-57, Organism=Homo sapiens, GI32455264, Length=190, Percent_Identity=51.0526315789474, Blast_Score=219, Evalue=1e-57, Organism=Homo sapiens, GI32189392, Length=190, Percent_Identity=49.4736842105263, Blast_Score=216, Evalue=1e-56, Organism=Homo sapiens, GI5802974, Length=190, Percent_Identity=50, Blast_Score=215, Evalue=2e-56, Organism=Homo sapiens, GI32483377, Length=198, Percent_Identity=48.989898989899, Blast_Score=213, Evalue=1e-55, Organism=Homo sapiens, GI5453549, Length=191, Percent_Identity=47.1204188481675, Blast_Score=199, Evalue=1e-51, Organism=Homo sapiens, GI33188454, Length=131, Percent_Identity=41.9847328244275, Blast_Score=103, Evalue=7e-23, Organism=Homo sapiens, GI4758638, Length=192, Percent_Identity=25.5208333333333, Blast_Score=69, Evalue=3e-12, Organism=Escherichia coli, GI1786822, Length=183, Percent_Identity=28.4153005464481, Blast_Score=103, Evalue=8e-24, Organism=Caenorhabditis elegans, GI17554494, Length=185, Percent_Identity=49.1891891891892, Blast_Score=199, Evalue=7e-52, Organism=Caenorhabditis elegans, GI193204376, Length=191, Percent_Identity=46.0732984293194, Blast_Score=197, Evalue=2e-51, Organism=Caenorhabditis elegans, GI32565831, Length=191, Percent_Identity=46.0732984293194, Blast_Score=197, Evalue=2e-51, Organism=Caenorhabditis elegans, GI25153706, Length=184, Percent_Identity=27.7173913043478, Blast_Score=77, Evalue=6e-15, Organism=Saccharomyces cerevisiae, GI6323613, Length=188, Percent_Identity=45.7446808510638, Blast_Score=185, Evalue=4e-48, Organism=Saccharomyces cerevisiae, GI6320661, Length=188, Percent_Identity=42.5531914893617, Blast_Score=174, Evalue=7e-45, Organism=Saccharomyces cerevisiae, GI6319407, Length=201, Percent_Identity=27.363184079602, Blast_Score=97, Evalue=2e-21, Organism=Drosophila melanogaster, GI24656348, Length=191, Percent_Identity=51.8324607329843, Blast_Score=214, Evalue=2e-56, Organism=Drosophila melanogaster, GI17864676, Length=191, Percent_Identity=51.8324607329843, Blast_Score=214, Evalue=2e-56, Organism=Drosophila melanogaster, GI17738015, Length=192, Percent_Identity=48.9583333333333, Blast_Score=204, Evalue=2e-53, Organism=Drosophila melanogaster, GI17157991, Length=177, Percent_Identity=49.7175141242938, Blast_Score=196, Evalue=8e-51, Organism=Drosophila melanogaster, GI24641739, Length=177, Percent_Identity=49.7175141242938, Blast_Score=196, Evalue=8e-51, Organism=Drosophila melanogaster, GI21357347, Length=188, Percent_Identity=45.2127659574468, Blast_Score=189, Evalue=9e-49, Organism=Drosophila melanogaster, GI24581278, Length=183, Percent_Identity=25.1366120218579, Blast_Score=82, Evalue=2e-16, Organism=Drosophila melanogaster, GI17975518, Length=186, Percent_Identity=29.5698924731183, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24652434, Length=186, Percent_Identity=29.0322580645161, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI24652436, Length=186, Percent_Identity=29.0322580645161, Blast_Score=79, Evalue=2e-15,
Paralogues:
None
Copy number: 300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2250 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 6040 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1580 Molecules/Cell In: Stationary-Phase
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR019479 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF10417 1-cysPrx_C; PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 21804; Mature: 21673
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTTLVTQQAPDFTAEAVMADNSFASITLSSLKGKFVLLLFYPLDFTFVCPSEILAFNR CCCHHEEECCCCCCCHHEEEECCCCCEEEEECCCCCEEEEEEECCCEEEECHHHHHHHCC QIAAFKAKNCEVIGISVDSKFTHLAWKNTPIENGGIGNIQFPLVQDLDREIAKSYGILLN HHEEEECCCCEEEEEECCCCEEEEEECCCCCCCCCCCCEECHHHHHHHHHHHHHCCEEEE NSVALRGLFLIDPTGTVRHCIINDLPLGRSVTEAIRMLDAIQFSDTHGEVCPANWQEGEE CCEEEEEEEEECCCCCCHHHEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH AMKPTTEGVADYLTRFAR HHCCCHHHHHHHHHHHCC >Mature Secondary Structure SLTTLVTQQAPDFTAEAVMADNSFASITLSSLKGKFVLLLFYPLDFTFVCPSEILAFNR CCHHEEECCCCCCCHHEEEECCCCCEEEEECCCCCEEEEEEECCCEEEECHHHHHHHCC QIAAFKAKNCEVIGISVDSKFTHLAWKNTPIENGGIGNIQFPLVQDLDREIAKSYGILLN HHEEEECCCCEEEEEECCCCEEEEEECCCCCCCCCCCCEECHHHHHHHHHHHHHCCEEEE NSVALRGLFLIDPTGTVRHCIINDLPLGRSVTEAIRMLDAIQFSDTHGEVCPANWQEGEE CCEEEEEEEEECCCCCCHHHEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH AMKPTTEGVADYLTRFAR HHCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682; 1987145 [H]