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The map label for this gene is rng [H]

Identifier: 118578792

GI number: 118578792

Start: 350449

End: 351972

Strand: Reverse

Name: rng [H]

Synonym: Ppro_0350

Alternate gene names: 118578792

Gene position: 351972-350449 (Counterclockwise)

Preceding gene: 118578793

Following gene: 118578791

Centisome position: 8.78

GC content: 60.83

Gene sequence:

>1524_bases
ATGGCAACAGAGCTGGTTATCAACGCCACGTCCCATGAAACCCGTATCGCGCTGATTGAGAACGGCACCATCGCCGAACT
GCACATCGAGCGCACCCGGGAAAAGGGAATCATCGGCAATATCTACAAGGGCAGGGTCATCCGCGTCCTGCCCGGCATGC
AGGCCGCCTTCGTGGACATCGGGCTTGAAAAGGCGGCCTTTTTGTACGTGGCCGACGTATTCGACGCCATCGAGGAGTAC
GAATCGCTGCTGTACAACGGCAAGAAGGAGCACGAGCCGAACGGCGACCAGCTGCCGGCCAGCCAGCCCGATTTCAAACC
GCTGCACCCCATCGAGGAGCTGCTCCAGGAGGGACAGGAGCTCTTGGTACAGATCTCCAAGGAGCCCATCGGCACCAAGG
GGGCCCGCATCACCTCCCACATCTCCCTGCCGGGGCGCCACCTGGTCTACATGCCCACCGTGGACCACGTGGGCATCTCG
CGCCGCATCGAGGAAGAGAACGAGCGCGAACGCCTGCGCGAGGCGGTTGAGCGGCTCAAGCAGCCCGGCTCCGGCTACAT
CGTCAGGACCGTCTCCGAGGGAAAGAGTGAGGAGGATCTGCTGTCGGACATGCAGTACCTCTCCACCCTGTGGGGCGAGA
TCACCAAGCGCAAGGAGAACGCGCCGGCCCCCTCCCTGATCCACTCCGACCTGGACGTGATCCAGAAGGTGGTGCGCGAC
ATCGTTACCGAGCAGGTGGACACGATCATCGTCGACTCCAAGCCGGACTATGACCGCATCGTCCAGTTCATCACCACCTT
CATGCCCAAGATGAAGTACTCCATCGAGCTCTACGACGACGAGGAGCCGATCTTCGACCACTTCGGCCTGGAGGTGGAAA
TCAGCCGCGCCCTGGGACGCAAGGTATGGCTCAAGTCGGGCGGCTACATCATCATCGAGCAGACCGAGGCCCTGACCGCC
ATCGACGTCAACACCGGCCGTTTCGTGGGCAAGCACAACCTGGAGGACACGATCCTCAAGACAAACCTGGAGGCGGTCAA
GGAGATAGCCTACCAGCTCAGGCTGCGCAACATCGGCGGCATCATCATCATCGACTTCATCGACATGGAAAAGGAGGTCA
ACCGGGACAAGGTATTCACCGCCCTGGAAGACACCCTGAAGAGCGACAAGTCCAAAACAAACATCCTCAAGATCTCCGAG
CTGGGGCTGGTGGAGATGACCAGAAAAAGGGTGCGGGAGAGCATCGGCCGCATGATGTGCGAACCGTGCACCTACTGCGA
GGGGCGCGGCTACATCAAGTCCAAGACAACCGTCTGCCACGAGATCTTCCGGGAACTGCGGCGCGAGATGCTGGACTCCC
GCGGCACCAAGGCCATGGTGTCGGTGCACCCCCAGGTGGCTGACCTGCTCTACGACGAGGAGCGGCGGGGGCTGGAGGAA
CTGGAGAAGAAGTTCAGGAAGCGCATTACCGTGCGCGCCAAACCGGGCTTCCACCAGGAACAGTTCGAAATCATCATCAG
CTGA

Upstream 100 bases:

>100_bases
AACTCACTGGGTGGTGACGACATGCGCGTCGAGAAGCTGGAGGTCATCTTCTCCGCCTGACCGGTAAAATGCTTACATTG
ACATATAGAGGGGTTTTTCC

Downstream 100 bases:

>100_bases
ACAGGCGAAGCAACTGGCACGAGCCGTGGCCAAGCCAACTTTTTACTTGACTTGTGACCCTTTGGTCACTATAGTTCAAA
ACTCTTTTAAAAATGATGCG

Product: ribonuclease

Products: NA

Alternate protein names: RNase G; Cytoplasmic axial filament protein [H]

Number of amino acids: Translated: 507; Mature: 506

Protein sequence:

>507_residues
MATELVINATSHETRIALIENGTIAELHIERTREKGIIGNIYKGRVIRVLPGMQAAFVDIGLEKAAFLYVADVFDAIEEY
ESLLYNGKKEHEPNGDQLPASQPDFKPLHPIEELLQEGQELLVQISKEPIGTKGARITSHISLPGRHLVYMPTVDHVGIS
RRIEEENERERLREAVERLKQPGSGYIVRTVSEGKSEEDLLSDMQYLSTLWGEITKRKENAPAPSLIHSDLDVIQKVVRD
IVTEQVDTIIVDSKPDYDRIVQFITTFMPKMKYSIELYDDEEPIFDHFGLEVEISRALGRKVWLKSGGYIIIEQTEALTA
IDVNTGRFVGKHNLEDTILKTNLEAVKEIAYQLRLRNIGGIIIIDFIDMEKEVNRDKVFTALEDTLKSDKSKTNILKISE
LGLVEMTRKRVRESIGRMMCEPCTYCEGRGYIKSKTTVCHEIFRELRREMLDSRGTKAMVSVHPQVADLLYDEERRGLEE
LEKKFRKRITVRAKPGFHQEQFEIIIS

Sequences:

>Translated_507_residues
MATELVINATSHETRIALIENGTIAELHIERTREKGIIGNIYKGRVIRVLPGMQAAFVDIGLEKAAFLYVADVFDAIEEY
ESLLYNGKKEHEPNGDQLPASQPDFKPLHPIEELLQEGQELLVQISKEPIGTKGARITSHISLPGRHLVYMPTVDHVGIS
RRIEEENERERLREAVERLKQPGSGYIVRTVSEGKSEEDLLSDMQYLSTLWGEITKRKENAPAPSLIHSDLDVIQKVVRD
IVTEQVDTIIVDSKPDYDRIVQFITTFMPKMKYSIELYDDEEPIFDHFGLEVEISRALGRKVWLKSGGYIIIEQTEALTA
IDVNTGRFVGKHNLEDTILKTNLEAVKEIAYQLRLRNIGGIIIIDFIDMEKEVNRDKVFTALEDTLKSDKSKTNILKISE
LGLVEMTRKRVRESIGRMMCEPCTYCEGRGYIKSKTTVCHEIFRELRREMLDSRGTKAMVSVHPQVADLLYDEERRGLEE
LEKKFRKRITVRAKPGFHQEQFEIIIS
>Mature_506_residues
ATELVINATSHETRIALIENGTIAELHIERTREKGIIGNIYKGRVIRVLPGMQAAFVDIGLEKAAFLYVADVFDAIEEYE
SLLYNGKKEHEPNGDQLPASQPDFKPLHPIEELLQEGQELLVQISKEPIGTKGARITSHISLPGRHLVYMPTVDHVGISR
RIEEENERERLREAVERLKQPGSGYIVRTVSEGKSEEDLLSDMQYLSTLWGEITKRKENAPAPSLIHSDLDVIQKVVRDI
VTEQVDTIIVDSKPDYDRIVQFITTFMPKMKYSIELYDDEEPIFDHFGLEVEISRALGRKVWLKSGGYIIIEQTEALTAI
DVNTGRFVGKHNLEDTILKTNLEAVKEIAYQLRLRNIGGIIIIDFIDMEKEVNRDKVFTALEDTLKSDKSKTNILKISEL
GLVEMTRKRVRESIGRMMCEPCTYCEGRGYIKSKTTVCHEIFRELRREMLDSRGTKAMVSVHPQVADLLYDEERRGLEEL
EKKFRKRITVRAKPGFHQEQFEIIIS

Specific function: Involved in the processing of the 5'-end of 16S rRNA. Could be involved in chromosome segregation and cell division. It may be one of the components of the cytoplasmic axial filaments bundles or merely regulate the formation of this structure [H]

COG id: COG1530

COG function: function code J; Ribonucleases G and E

Gene ontology:

Cell location: Cytoplasm, cytoskeleton [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Escherichia coli, GI87082235, Length=506, Percent_Identity=46.6403162055336, Blast_Score=445, Evalue=1e-126,
Organism=Escherichia coli, GI1787325, Length=484, Percent_Identity=37.1900826446281, Blast_Score=292, Evalue=4e-80,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR019307
- InterPro:   IPR022967
- InterPro:   IPR004659 [H]

Pfam domain/function: PF10150 RNase_E_G; PF00575 S1 [H]

EC number: 3.1.4.- [C]

Molecular weight: Translated: 58036; Mature: 57904

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATELVINATSHETRIALIENGTIAELHIERTREKGIIGNIYKGRVIRVLPGMQAAFVDI
CCCEEEEEECCCCEEEEEEECCCEEEEEEHHHHCCCCCCCCCCCCEEEECCCCHHHHHHH
GLEKAAFLYVADVFDAIEEYESLLYNGKKEHEPNGDQLPASQPDFKPLHPIEELLQEGQE
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
LLVQISKEPIGTKGARITSHISLPGRHLVYMPTVDHVGISRRIEEENERERLREAVERLK
HHHHHHCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCHHHHHCCHHHHHHHHHHHHHHH
QPGSGYIVRTVSEGKSEEDLLSDMQYLSTLWGEITKRKENAPAPSLIHSDLDVIQKVVRD
CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
IVTEQVDTIIVDSKPDYDRIVQFITTFMPKMKYSIELYDDEEPIFDHFGLEVEISRALGR
HHHHHHCEEEECCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHCCCEEEEHHHHCC
KVWLKSGGYIIIEQTEALTAIDVNTGRFVGKHNLEDTILKTNLEAVKEIAYQLRLRNIGG
EEEEECCCEEEEECCCCEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
IIIIDFIDMEKEVNRDKVFTALEDTLKSDKSKTNILKISELGLVEMTRKRVRESIGRMMC
EEEEEEECCHHHCCHHHHHHHHHHHHHCCCCCCCEEEEHHCCHHHHHHHHHHHHHHHHHC
EPCTYCEGRGYIKSKTTVCHEIFRELRREMLDSRGTKAMVSVHPQVADLLYDEERRGLEE
CCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCCHHH
LEKKFRKRITVRAKPGFHQEQFEIIIS
HHHHHHHCEEEEECCCCCCCCEEEEEC
>Mature Secondary Structure 
ATELVINATSHETRIALIENGTIAELHIERTREKGIIGNIYKGRVIRVLPGMQAAFVDI
CCEEEEEECCCCEEEEEEECCCEEEEEEHHHHCCCCCCCCCCCCEEEECCCCHHHHHHH
GLEKAAFLYVADVFDAIEEYESLLYNGKKEHEPNGDQLPASQPDFKPLHPIEELLQEGQE
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
LLVQISKEPIGTKGARITSHISLPGRHLVYMPTVDHVGISRRIEEENERERLREAVERLK
HHHHHHCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCHHHHHCCHHHHHHHHHHHHHHH
QPGSGYIVRTVSEGKSEEDLLSDMQYLSTLWGEITKRKENAPAPSLIHSDLDVIQKVVRD
CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
IVTEQVDTIIVDSKPDYDRIVQFITTFMPKMKYSIELYDDEEPIFDHFGLEVEISRALGR
HHHHHHCEEEECCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHCCCEEEEHHHHCC
KVWLKSGGYIIIEQTEALTAIDVNTGRFVGKHNLEDTILKTNLEAVKEIAYQLRLRNIGG
EEEEECCCEEEEECCCCEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
IIIIDFIDMEKEVNRDKVFTALEDTLKSDKSKTNILKISELGLVEMTRKRVRESIGRMMC
EEEEEEECCHHHCCHHHHHHHHHHHHHCCCCCCCEEEEHHCCHHHHHHHHHHHHHHHHHC
EPCTYCEGRGYIKSKTTVCHEIFRELRREMLDSRGTKAMVSVHPQVADLLYDEERRGLEE
CCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCCHHH
LEKKFRKRITVRAKPGFHQEQFEIIIS
HHHHHHHCEEEEECCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]