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The map label for this gene is (hspc4-1 [H]

Identifier: 118578757

GI number: 118578757

Start: 313250

End: 313699

Strand: Reverse

Name: (hspc4-1 [H]

Synonym: Ppro_0315

Alternate gene names: 118578757

Gene position: 313699-313250 (Counterclockwise)

Preceding gene: 118578758

Following gene: 118578756

Centisome position: 7.83

GC content: 60.89

Gene sequence:

>450_bases
ATGGCAGGCTGGGATGTATTCAGAGAACTGGACAACCTGAGAAGGGAGATCAACGAGGCATTTCGCGGAGCGGGAGTGAG
CCATCCACTGGCAACCGCGTTCCTTTCCCCGGCGGTGACGCGGCGCTTCCCGCTGGTCAATTTCAGTGAGGACGAGGGGA
ACGTATATGTGGATGCGCTGCTTCCCGGCGTGGACCCCGGGGAGATCGACCTCTCGGTGCTGCGCAACACCATCACCATC
AGCGGAGAGCGCAAACCGTTCGAGCCCAAGGAAGGGCAGATCGTGCACCGCAGCGAACTGGGCTCGGGCACGTTTTCGCG
GACCCTGGAGCTGCCGGTGGACATCGATCCCGACAGGATCAGCGCCGAGAGCAGAAACGGCATCATGCGCATCCGACTGG
CAAAGGCCGAGCATGCCAAGCCCAAAAAGATCGAGATCAAGCTTTCGTGA

Upstream 100 bases:

>100_bases
GCCAGCACTCCCCGAAGAGCTCTCCTTTTCCCCCCTTGACAAGCCCACGATCATGCTTATCTCTTTTTAAAGAAACAGCT
AACGAAAGGAGGTACTCCAC

Downstream 100 bases:

>100_bases
GCAGCGACACCCAGAGAGAATTATGGATGAAAGGAGGTCAGACAACCATGGCGGTGAACGGATTGAACGAGCAGGGAAGC
GACAAGAATCTCCAGACCCG

Product: heat shock protein Hsp20

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MAGWDVFRELDNLRREINEAFRGAGVSHPLATAFLSPAVTRRFPLVNFSEDEGNVYVDALLPGVDPGEIDLSVLRNTITI
SGERKPFEPKEGQIVHRSELGSGTFSRTLELPVDIDPDRISAESRNGIMRIRLAKAEHAKPKKIEIKLS

Sequences:

>Translated_149_residues
MAGWDVFRELDNLRREINEAFRGAGVSHPLATAFLSPAVTRRFPLVNFSEDEGNVYVDALLPGVDPGEIDLSVLRNTITI
SGERKPFEPKEGQIVHRSELGSGTFSRTLELPVDIDPDRISAESRNGIMRIRLAKAEHAKPKKIEIKLS
>Mature_148_residues
AGWDVFRELDNLRREINEAFRGAGVSHPLATAFLSPAVTRRFPLVNFSEDEGNVYVDALLPGVDPGEIDLSVLRNTITIS
GERKPFEPKEGQIVHRSELGSGTFSRTLELPVDIDPDRISAESRNGIMRIRLAKAEHAKPKKIEIKLS

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 16577; Mature: 16446

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGWDVFRELDNLRREINEAFRGAGVSHPLATAFLSPAVTRRFPLVNFSEDEGNVYVDAL
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHCCCCEEECCCCCCEEEEEE
LPGVDPGEIDLSVLRNTITISGERKPFEPKEGQIVHRSELGSGTFSRTLELPVDIDPDRI
CCCCCCCCEEHEEEEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCEEEECCCCCCCCCC
SAESRNGIMRIRLAKAEHAKPKKIEIKLS
CCCCCCCEEEEEEECCCCCCCCEEEEEEC
>Mature Secondary Structure 
AGWDVFRELDNLRREINEAFRGAGVSHPLATAFLSPAVTRRFPLVNFSEDEGNVYVDAL
CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHCCCCEEECCCCCCEEEEEE
LPGVDPGEIDLSVLRNTITISGERKPFEPKEGQIVHRSELGSGTFSRTLELPVDIDPDRI
CCCCCCCCEEHEEEEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCEEEECCCCCCCCCC
SAESRNGIMRIRLAKAEHAKPKKIEIKLS
CCCCCCCEEEEEEECCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA