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The map label for this gene is recR

Identifier: 118578741

GI number: 118578741

Start: 297797

End: 298390

Strand: Reverse

Name: recR

Synonym: Ppro_0299

Alternate gene names: 118578741

Gene position: 298390-297797 (Counterclockwise)

Preceding gene: 118578742

Following gene: 118578740

Centisome position: 7.44

GC content: 57.74

Gene sequence:

>594_bases
ATGCTAACTAAGCCTTCCGCACTGTCACGATTGGTGGGAGAGTTGAAGAAGTTGCCCGGTGTAGGCGAACGCACCGCCCT
CAGGCTTGCATTCCACCTGCTAAAAACTCCTCAGAATCTGACCGCACTGTCGGAATCACTGCTCGAAGTAAAAAGCAGGG
TGCGTTCCTGTTCGATCTGTTTTGCAATAACCGAGGATGACCCCTGTGCCATCTGCGCGGGGGACCGGGACACAGGCACC
ATATGCGTGGTCGAGAATTCCCAGGACCTGATGGCCCTGGAGCGGAGCAACGCCTATCACGGCACCTACCACGTTCTCGA
AGGCGTGATTTCCCCCCTGGCGGGTATCGGACCGTCGGAACTGAGAATAGCCGAACTACTGGCCAGGATCGGCAGGGGCG
GAGTCGACGAGGTTGTGATTGCCACAAATTTCACCGTCGAGGGAGAAGCGACGGCGCTGTACTTGGCCAAGCTCCTGAAA
CCACTCGGCATACGGATTTCGCGTCTGGCGCACGGCATACCCCTGGGAAGTGATATCGAGTATGTGGACGCAGCCACGGT
CCAGTGGGCACTACAGGGACGGAACCAGCTCTAA

Upstream 100 bases:

>100_bases
TTTTCATGGTCAAGCAGACTTCGCCGCGCCGTGAAAAACGCTATTTTAGCGGCTTATATCATCGGCCCAGCCAAAAACCG
TTTTACTTGTTTTGGAATAT

Downstream 100 bases:

>100_bases
CCCATGTCGTTCATCTACAGATCCAGTTCACCCAAGGAACTGTAACAAAACATGTAAGTCAGTCGAGCAGAACAAACGTC
GCATGAAATCACGTGTCACA

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MLTKPSALSRLVGELKKLPGVGERTALRLAFHLLKTPQNLTALSESLLEVKSRVRSCSICFAITEDDPCAICAGDRDTGT
ICVVENSQDLMALERSNAYHGTYHVLEGVISPLAGIGPSELRIAELLARIGRGGVDEVVIATNFTVEGEATALYLAKLLK
PLGIRISRLAHGIPLGSDIEYVDAATVQWALQGRNQL

Sequences:

>Translated_197_residues
MLTKPSALSRLVGELKKLPGVGERTALRLAFHLLKTPQNLTALSESLLEVKSRVRSCSICFAITEDDPCAICAGDRDTGT
ICVVENSQDLMALERSNAYHGTYHVLEGVISPLAGIGPSELRIAELLARIGRGGVDEVVIATNFTVEGEATALYLAKLLK
PLGIRISRLAHGIPLGSDIEYVDAATVQWALQGRNQL
>Mature_197_residues
MLTKPSALSRLVGELKKLPGVGERTALRLAFHLLKTPQNLTALSESLLEVKSRVRSCSICFAITEDDPCAICAGDRDTGT
ICVVENSQDLMALERSNAYHGTYHVLEGVISPLAGIGPSELRIAELLARIGRGGVDEVVIATNFTVEGEATALYLAKLLK
PLGIRISRLAHGIPLGSDIEYVDAATVQWALQGRNQL

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

Organism=Escherichia coli, GI1786678, Length=200, Percent_Identity=40.5, Blast_Score=149, Evalue=1e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_PELPD (A1AKR3)

Other databases:

- EMBL:   CP000482
- RefSeq:   YP_899991.1
- ProteinModelPortal:   A1AKR3
- SMR:   A1AKR3
- STRING:   A1AKR3
- GeneID:   4573149
- GenomeReviews:   CP000482_GR
- KEGG:   ppd:Ppro_0299
- eggNOG:   COG0353
- HOGENOM:   HBG571744
- OMA:   HGAISPM
- PhylomeDB:   A1AKR3
- ProtClustDB:   PRK00076
- HAMAP:   MF_00017
- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967
- SMART:   SM00278
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF02132 RecR; PF01751 Toprim; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 21147; Mature: 21147

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTKPSALSRLVGELKKLPGVGERTALRLAFHLLKTPQNLTALSESLLEVKSRVRSCSIC
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEE
FAITEDDPCAICAGDRDTGTICVVENSQDLMALERSNAYHGTYHVLEGVISPLAGIGPSE
EEEECCCCEEEEECCCCCCEEEEEECCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHH
LRIAELLARIGRGGVDEVVIATNFTVEGEATALYLAKLLKPLGIRISRLAHGIPLGSDIE
HHHHHHHHHHCCCCCCCEEEEECEEECCCHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCC
YVDAATVQWALQGRNQL
HHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLTKPSALSRLVGELKKLPGVGERTALRLAFHLLKTPQNLTALSESLLEVKSRVRSCSIC
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEE
FAITEDDPCAICAGDRDTGTICVVENSQDLMALERSNAYHGTYHVLEGVISPLAGIGPSE
EEEECCCCEEEEECCCCCCEEEEEECCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHH
LRIAELLARIGRGGVDEVVIATNFTVEGEATALYLAKLLKPLGIRISRLAHGIPLGSDIE
HHHHHHHHHHCCCCCCCEEEEECEEECCCHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCC
YVDAATVQWALQGRNQL
HHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA