| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is tal
Identifier: 118578736
GI number: 118578736
Start: 291410
End: 292054
Strand: Reverse
Name: tal
Synonym: Ppro_0294
Alternate gene names: 118578736
Gene position: 292054-291410 (Counterclockwise)
Preceding gene: 118578737
Following gene: 118578735
Centisome position: 7.29
GC content: 58.45
Gene sequence:
>645_bases ATGAAGTTTTTCATCGACACCGCGGATGTCCGCGAAATACGCGAAGCACACGAACTGGGCCTGGTTGACGGCGTAACCAC CAACCCGTCACTGATTGCCAAATCAGGCCGCAAATTCCAGGAGGTCATCCAGGAGATCACCTCCATCGTCGACGGCCCCA TCTCGGCCGAGGTCATCGCCCTGGATGCTCCTGGCATGATCAGAGAGGCCGAGGAGCTGGTCAAGATCCACGCAAATATC GTTGTCAAGGTCCCCATGACCCCTGAAGGGCTCAAGGCCACCAAGGCCCTCAGCGCAAAGGGAATCAAGACCAACGTCAC CCTGATCTTCTCCTCCCTGCAAGCGCTCCTGGCCGCCAAGGCCGGCGCCACCTATGTCTCCCCCTTTGTTGGCAGGCTGG ACGACATTTCCCAGGACGGCATGGGCATCATTGAAGAGATCCGCACCATGTTCGACAATTACGGCTACACCAGCGAGATA ATCGTCGCCAGCGTACGCAACCCGATTCATGTGCTCAACTCGGCCCTGATCGGCGCCGACATCGCCACCATCCCCTATTC GGTCATGCTCCAGCTGTCCAAGCACCCCCTGACCGACGCCGGCATCAAGAAGTTCCTGGCTGACTGGGAAAGCGTGCCCA AATAA
Upstream 100 bases:
>100_bases TCGATACATACCGTGGCAAAATACACTACTTCTGCTCACCGGCCTGTCGCGACAGGTTCCGGGAGCATCCCGAACACACA TAACCCAACGGAGGAGAGCA
Downstream 100 bases:
>100_bases ATCCCGAACAGACTTGAATACACAAGCCACCAGCTCCCGCAGCTGGTGGCTTTTCTCGTGCACCGGCCACTGCAATAGCC ACTCGGCCCGAGCTTACCGG
Product: putative translaldolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MKFFIDTADVREIREAHELGLVDGVTTNPSLIAKSGRKFQEVIQEITSIVDGPISAEVIALDAPGMIREAEELVKIHANI VVKVPMTPEGLKATKALSAKGIKTNVTLIFSSLQALLAAKAGATYVSPFVGRLDDISQDGMGIIEEIRTMFDNYGYTSEI IVASVRNPIHVLNSALIGADIATIPYSVMLQLSKHPLTDAGIKKFLADWESVPK
Sequences:
>Translated_214_residues MKFFIDTADVREIREAHELGLVDGVTTNPSLIAKSGRKFQEVIQEITSIVDGPISAEVIALDAPGMIREAEELVKIHANI VVKVPMTPEGLKATKALSAKGIKTNVTLIFSSLQALLAAKAGATYVSPFVGRLDDISQDGMGIIEEIRTMFDNYGYTSEI IVASVRNPIHVLNSALIGADIATIPYSVMLQLSKHPLTDAGIKKFLADWESVPK >Mature_214_residues MKFFIDTADVREIREAHELGLVDGVTTNPSLIAKSGRKFQEVIQEITSIVDGPISAEVIALDAPGMIREAEELVKIHANI VVKVPMTPEGLKATKALSAKGIKTNVTLIFSSLQALLAAKAGATYVSPFVGRLDDISQDGMGIIEEIRTMFDNYGYTSEI IVASVRNPIHVLNSALIGADIATIPYSVMLQLSKHPLTDAGIKKFLADWESVPK
Specific function: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
COG id: COG0176
COG function: function code G; Transaldolase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transaldolase family. Type 3B subfamily
Homologues:
Organism=Homo sapiens, GI5803187, Length=243, Percent_Identity=27.5720164609054, Blast_Score=74, Evalue=1e-13, Organism=Escherichia coli, GI87081788, Length=212, Percent_Identity=35.377358490566, Blast_Score=138, Evalue=2e-34, Organism=Escherichia coli, GI1790382, Length=213, Percent_Identity=37.0892018779343, Blast_Score=129, Evalue=1e-31, Organism=Escherichia coli, GI1788807, Length=244, Percent_Identity=29.9180327868852, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1786189, Length=173, Percent_Identity=31.7919075144509, Blast_Score=76, Evalue=1e-15, Organism=Caenorhabditis elegans, GI25153750, Length=244, Percent_Identity=28.6885245901639, Blast_Score=77, Evalue=5e-15, Organism=Saccharomyces cerevisiae, GI6321480, Length=205, Percent_Identity=29.2682926829268, Blast_Score=83, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6323386, Length=138, Percent_Identity=34.7826086956522, Blast_Score=69, Evalue=8e-13, Organism=Drosophila melanogaster, GI45549185, Length=223, Percent_Identity=27.8026905829596, Blast_Score=75, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): TAL_PELPD (A1AKQ8)
Other databases:
- EMBL: CP000482 - RefSeq: YP_899986.1 - ProteinModelPortal: A1AKQ8 - SMR: A1AKQ8 - STRING: A1AKQ8 - GeneID: 4574887 - GenomeReviews: CP000482_GR - KEGG: ppd:Ppro_0294 - eggNOG: COG0176 - HOGENOM: HBG533000 - OMA: IHKNIVI - PhylomeDB: A1AKQ8 - ProtClustDB: PRK01362 - GO: GO:0005737 - HAMAP: MF_00494 - InterPro: IPR013785 - InterPro: IPR001585 - InterPro: IPR004731 - InterPro: IPR022999 - InterPro: IPR018225 - Gene3D: G3DSA:3.20.20.70 - PANTHER: PTHR10683 - TIGRFAMs: TIGR00875
Pfam domain/function: PF00923 Transaldolase
EC number: =2.2.1.2
Molecular weight: Translated: 23116; Mature: 23116
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: PS01054 TRANSALDOLASE_1; PS00958 TRANSALDOLASE_2
Important sites: ACT_SITE 83-83
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFFIDTADVREIREAHELGLVDGVTTNPSLIAKSGRKFQEVIQEITSIVDGPISAEVIA CEEEECCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEE LDAPGMIREAEELVKIHANIVVKVPMTPEGLKATKALSAKGIKTNVTLIFSSLQALLAAK ECCCCHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH AGATYVSPFVGRLDDISQDGMGIIEEIRTMFDNYGYTSEIIVASVRNPIHVLNSALIGAD CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCH IATIPYSVMLQLSKHPLTDAGIKKFLADWESVPK HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MKFFIDTADVREIREAHELGLVDGVTTNPSLIAKSGRKFQEVIQEITSIVDGPISAEVIA CEEEECCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEE LDAPGMIREAEELVKIHANIVVKVPMTPEGLKATKALSAKGIKTNVTLIFSSLQALLAAK ECCCCHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH AGATYVSPFVGRLDDISQDGMGIIEEIRTMFDNYGYTSEIIVASVRNPIHVLNSALIGAD CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCH IATIPYSVMLQLSKHPLTDAGIKKFLADWESVPK HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA