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The map label for this gene is yigC [C]

Identifier: 118578733

GI number: 118578733

Start: 287529

End: 288929

Strand: Reverse

Name: yigC [C]

Synonym: Ppro_0291

Alternate gene names: 118578733

Gene position: 288929-287529 (Counterclockwise)

Preceding gene: 118578734

Following gene: 118578732

Centisome position: 7.21

GC content: 67.81

Gene sequence:

>1401_bases
ATGGCGTCCCCTGACCTGCAACACTTCATCGCCACCCTGGAACGCCGCAACGAGCTTGCCGCAATCGACGCCGAAGTCGA
CCCGCTGCTGGAGATCGCCGCCATCACCGACCGGGTCTGCAAGTCTCCCATGAACGGGCCGGCGCTGCTCTTCCGCGCCC
CCACCGGATCGCGCTTTCCGGTCGCCACCAACCTGTTCGGTTCCCCCCGCCGGGTCTGCCTTGCCTTGGGGGTTGATCAC
CTGAAGCACCTGACGGAGCGCATGTCGGCGCTGCTTGGCGGGATTCCGGCTCCCGAGCTGTCCAGCCTGGACCGCCAGAT
CGCCGGTCTGGCCGACTTCTCCCGCTTCTCTCCGCACGCCTCGCCGAAACCCGACCCGCGACTGACAGCCATGGCAGCGC
CCGACCTGGGGCTGTTTCCCTTCCTGCAGAGTTGGCCCGGCGACGGCGGCAGCGACGGTTTTCCCCGCTACATCACCCTG
GGCCAGGTCTACACCCGTCACCCGGAGAGCGGCCACCAGAACTGCGGCATGTACGGCGCCCAGCTTCGCGGCCCGACGGA
GTTGGCCCTGCGCTGGAAGCAGGGGAGCGGAGCCGGCCGGCATCTGGAACGTTACCGCCGCCGGGGGGTGCCCATGCCGG
TGGCCATCACCTTGGGAGGCCCGCCGGCCATGACCTTGAGCGCCCTGTTCCCCCTGCCGGGGGAGCTGGACGAACTTACC
TTTGCCGGCTTCCTCGCCTCGTCCCCCCTGCGGACCACTGCCTGTCGCACGGTGCCGCTGATGGTCCCGGCCGCCTGCGA
ACTGCTCATCGAGGGGTACGTGAACCCCGCTGAAACGGTACGCGAGGGTCCCTTTGGCAACCACACCGGCAGCTACTCCC
CCGCCACCGACGCCAGCCTGATGAGGGTCACCACCATCAGCCACCGCCCTCACGCGATCATCCCGGCCACGGTGGTGGGG
CCGCCCCCCATGGAGGACTGCTGGATGGCCCGGGCCTGGGAGCGGCTGCTGCTGGCATTCCTGCAGCGGCTGATCCCGGG
CATTGCCGAGATCTGCTTACCGCTGCAGTGGGTCTTCCACCAGAGCGCCATCATTTCCCTTGAAAACCCGACTCCGGCCA
TGGTAAGGGAAACAGCCTCCCGGCTCTGGGAAACCCCCTGGTTTACTGCCAGCCGGCTGCTGATATTCGTGGATGCCGGA
ACCGCTCCGGACGACCTGGGCACGGTTGCCTGGTCCGCCATCAACAGCTGCGACGTTGATGGCGACATGATCAGGGACAG
CTCAGGCCTGCGAACGGCCCTGGACGCCACCGGCTGTCGCATGGCGCGGCAGCGGATACAGCCGGACGAAGCCGTTGCGC
GACGCATCGCCCGCCGCTGGAAGGAATACGGACTGGAATGA

Upstream 100 bases:

>100_bases
CCGCCGCTCCTTCGCCGTGAGCGGCATCGCCTGCGCCCCCCATCCCCATTACGGCGGCCTGTGCGTGATGGATTTCGCCG
ACAGATTCCTGGACTGAACC

Downstream 100 bases:

>100_bases
ACGCCATGACACACAACGGACCCATCGGAAAGATCGCCGTGTTCCTGGAGATGATCAAGTTCTCCCACACGGTTTTCGCC
CTCCCCTTCGCCCTGTCCGG

Product: UbiD family decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 466; Mature: 465

Protein sequence:

>466_residues
MASPDLQHFIATLERRNELAAIDAEVDPLLEIAAITDRVCKSPMNGPALLFRAPTGSRFPVATNLFGSPRRVCLALGVDH
LKHLTERMSALLGGIPAPELSSLDRQIAGLADFSRFSPHASPKPDPRLTAMAAPDLGLFPFLQSWPGDGGSDGFPRYITL
GQVYTRHPESGHQNCGMYGAQLRGPTELALRWKQGSGAGRHLERYRRRGVPMPVAITLGGPPAMTLSALFPLPGELDELT
FAGFLASSPLRTTACRTVPLMVPAACELLIEGYVNPAETVREGPFGNHTGSYSPATDASLMRVTTISHRPHAIIPATVVG
PPPMEDCWMARAWERLLLAFLQRLIPGIAEICLPLQWVFHQSAIISLENPTPAMVRETASRLWETPWFTASRLLIFVDAG
TAPDDLGTVAWSAINSCDVDGDMIRDSSGLRTALDATGCRMARQRIQPDEAVARRIARRWKEYGLE

Sequences:

>Translated_466_residues
MASPDLQHFIATLERRNELAAIDAEVDPLLEIAAITDRVCKSPMNGPALLFRAPTGSRFPVATNLFGSPRRVCLALGVDH
LKHLTERMSALLGGIPAPELSSLDRQIAGLADFSRFSPHASPKPDPRLTAMAAPDLGLFPFLQSWPGDGGSDGFPRYITL
GQVYTRHPESGHQNCGMYGAQLRGPTELALRWKQGSGAGRHLERYRRRGVPMPVAITLGGPPAMTLSALFPLPGELDELT
FAGFLASSPLRTTACRTVPLMVPAACELLIEGYVNPAETVREGPFGNHTGSYSPATDASLMRVTTISHRPHAIIPATVVG
PPPMEDCWMARAWERLLLAFLQRLIPGIAEICLPLQWVFHQSAIISLENPTPAMVRETASRLWETPWFTASRLLIFVDAG
TAPDDLGTVAWSAINSCDVDGDMIRDSSGLRTALDATGCRMARQRIQPDEAVARRIARRWKEYGLE
>Mature_465_residues
ASPDLQHFIATLERRNELAAIDAEVDPLLEIAAITDRVCKSPMNGPALLFRAPTGSRFPVATNLFGSPRRVCLALGVDHL
KHLTERMSALLGGIPAPELSSLDRQIAGLADFSRFSPHASPKPDPRLTAMAAPDLGLFPFLQSWPGDGGSDGFPRYITLG
QVYTRHPESGHQNCGMYGAQLRGPTELALRWKQGSGAGRHLERYRRRGVPMPVAITLGGPPAMTLSALFPLPGELDELTF
AGFLASSPLRTTACRTVPLMVPAACELLIEGYVNPAETVREGPFGNHTGSYSPATDASLMRVTTISHRPHAIIPATVVGP
PPMEDCWMARAWERLLLAFLQRLIPGIAEICLPLQWVFHQSAIISLENPTPAMVRETASRLWETPWFTASRLLIFVDAGT
APDDLGTVAWSAINSCDVDGDMIRDSSGLRTALDATGCRMARQRIQPDEAVARRIARRWKEYGLE

Specific function: Unknown

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=427, Percent_Identity=31.1475409836066, Blast_Score=201, Evalue=6e-53,
Organism=Saccharomyces cerevisiae, GI6320748, Length=338, Percent_Identity=23.9644970414201, Blast_Score=69, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR022390
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: 4.1.1.-

Molecular weight: Translated: 50777; Mature: 50646

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASPDLQHFIATLERRNELAAIDAEVDPLLEIAAITDRVCKSPMNGPALLFRAPTGSRFP
CCCCHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC
VATNLFGSPRRVCLALGVDHLKHLTERMSALLGGIPAPELSSLDRQIAGLADFSRFSPHA
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC
SPKPDPRLTAMAAPDLGLFPFLQSWPGDGGSDGFPRYITLGQVYTRHPESGHQNCGMYGA
CCCCCCCEEEEECCCCCHHHHHHHCCCCCCCCCCCCEEEECHHHHCCCCCCCCCCCCCCC
QLRGPTELALRWKQGSGAGRHLERYRRRGVPMPVAITLGGPPAMTLSALFPLPGELDELT
CCCCCHHEEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHCCCCCCHHHHH
FAGFLASSPLRTTACRTVPLMVPAACELLIEGYVNPAETVREGPFGNHTGSYSPATDASL
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCE
MRVTTISHRPHAIIPATVVGPPPMEDCWMARAWERLLLAFLQRLIPGIAEICLPLQWVFH
EEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QSAIISLENPTPAMVRETASRLWETPWFTASRLLIFVDAGTAPDDLGTVAWSAINSCDVD
CCEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCC
GDMIRDSSGLRTALDATGCRMARQRIQPDEAVARRIARRWKEYGLE
CHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ASPDLQHFIATLERRNELAAIDAEVDPLLEIAAITDRVCKSPMNGPALLFRAPTGSRFP
CCCHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC
VATNLFGSPRRVCLALGVDHLKHLTERMSALLGGIPAPELSSLDRQIAGLADFSRFSPHA
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC
SPKPDPRLTAMAAPDLGLFPFLQSWPGDGGSDGFPRYITLGQVYTRHPESGHQNCGMYGA
CCCCCCCEEEEECCCCCHHHHHHHCCCCCCCCCCCCEEEECHHHHCCCCCCCCCCCCCCC
QLRGPTELALRWKQGSGAGRHLERYRRRGVPMPVAITLGGPPAMTLSALFPLPGELDELT
CCCCCHHEEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHCCCCCCHHHHH
FAGFLASSPLRTTACRTVPLMVPAACELLIEGYVNPAETVREGPFGNHTGSYSPATDASL
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCE
MRVTTISHRPHAIIPATVVGPPPMEDCWMARAWERLLLAFLQRLIPGIAEICLPLQWVFH
EEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QSAIISLENPTPAMVRETASRLWETPWFTASRLLIFVDAGTAPDDLGTVAWSAINSCDVD
CCEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCC
GDMIRDSSGLRTALDATGCRMARQRIQPDEAVARRIARRWKEYGLE
CHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]