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The map label for this gene is yiaD [C]

Identifier: 118578704

GI number: 118578704

Start: 258768

End: 259373

Strand: Reverse

Name: yiaD [C]

Synonym: Ppro_0261

Alternate gene names: 118578704

Gene position: 259373-258768 (Counterclockwise)

Preceding gene: 118578706

Following gene: 118578703

Centisome position: 6.47

GC content: 53.8

Gene sequence:

>606_bases
ATGCCGGTAAAGCTCATGACCGCAGCATCGCTTGTTCTGGTTGTTCCGTTGTCGGCATTCGCAATGGACATTCGGCAACG
TCCATTCTCGTATTCCTTTGATACCGCTGCTTCCCAAAGTGGGGACACCTTCGTTGTTTGCACCGAGTGCCCGGACAGCA
AGCTGTCTCTGCTGCCCGCTGTTGCCAATGTAGCGGTGAGAATGAGCAGCCCAGTGGCGACTCAGCCAGCTTCAGCACCA
ATTGATGTCACGGCGGTTGCCCCCAATAAAGAACAGGTGGCAACAAAAAGACTTATCGGGACAGTTCATTTCCGGTTCGA
CAGTTCTTCGCTGTCCCATGCTGACCTGGGAGGACTGGACAAGCTATCAAAGGAGATTTTCGCTGGTTCGACAGTCGACC
TGACCGGACACACCTGTACCATCGGTACAGACGACTACAACAAAAAACTGTCTTTCAGGAGGGCAGAGGCGGTTGCCACA
GCGCTGAAGGCCAGGGGGGTGAACATCGGGACTATTGAAGGCAGAGGTAAATGCTGCCCTGCCTCGCAGGACAAACGACA
GAACAGACGAGTGGAAATCATCGGAATTCGAAAGGAGGGGATGTGA

Upstream 100 bases:

>100_bases
CAGAAATCTTCCTTTATTCAAGGAAAATGTTGTGCCTCGCGTATTCTCACCTTCCCCCCCTGAAGATAATCAATATGAAG
ATCAAATTTCCGGAGGGTAC

Downstream 100 bases:

>100_bases
AGACCGCAAACAACAAGAAACTTATGGTCGGCGGGCTGATGATGGTCATCATGACTGCGGCGGGTTTCTCTATGGCTAAC
GAAAATCTGAGAACGGAGAA

Product: OmpA/MotB domain-containing protein

Products: NA

Alternate protein names: OmpA/MotB Domain Protein; OmpA Domain-Containing Protein; OmpA Family Outer Membrane Protein

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MPVKLMTAASLVLVVPLSAFAMDIRQRPFSYSFDTAASQSGDTFVVCTECPDSKLSLLPAVANVAVRMSSPVATQPASAP
IDVTAVAPNKEQVATKRLIGTVHFRFDSSSLSHADLGGLDKLSKEIFAGSTVDLTGHTCTIGTDDYNKKLSFRRAEAVAT
ALKARGVNIGTIEGRGKCCPASQDKRQNRRVEIIGIRKEGM

Sequences:

>Translated_201_residues
MPVKLMTAASLVLVVPLSAFAMDIRQRPFSYSFDTAASQSGDTFVVCTECPDSKLSLLPAVANVAVRMSSPVATQPASAP
IDVTAVAPNKEQVATKRLIGTVHFRFDSSSLSHADLGGLDKLSKEIFAGSTVDLTGHTCTIGTDDYNKKLSFRRAEAVAT
ALKARGVNIGTIEGRGKCCPASQDKRQNRRVEIIGIRKEGM
>Mature_200_residues
PVKLMTAASLVLVVPLSAFAMDIRQRPFSYSFDTAASQSGDTFVVCTECPDSKLSLLPAVANVAVRMSSPVATQPASAPI
DVTAVAPNKEQVATKRLIGTVHFRFDSSSLSHADLGGLDKLSKEIFAGSTVDLTGHTCTIGTDDYNKKLSFRRAEAVATA
LKARGVNIGTIEGRGKCCPASQDKRQNRRVEIIGIRKEGM

Specific function: Unknown

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21430; Mature: 21299

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVKLMTAASLVLVVPLSAFAMDIRQRPFSYSFDTAASQSGDTFVVCTECPDSKLSLLPA
CCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHH
VANVAVRMSSPVATQPASAPIDVTAVAPNKEQVATKRLIGTVHFRFDSSSLSHADLGGLD
HHHHEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHEEEEEEEECCCCCCCCCCCCHH
KLSKEIFAGSTVDLTGHTCTIGTDDYNKKLSFRRAEAVATALKARGVNIGTIEGRGKCCP
HHHHHHHCCCEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCC
ASQDKRQNRRVEIIGIRKEGM
CCCCHHHCCEEEEEEEECCCC
>Mature Secondary Structure 
PVKLMTAASLVLVVPLSAFAMDIRQRPFSYSFDTAASQSGDTFVVCTECPDSKLSLLPA
CEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHH
VANVAVRMSSPVATQPASAPIDVTAVAPNKEQVATKRLIGTVHFRFDSSSLSHADLGGLD
HHHHEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHEEEEEEEECCCCCCCCCCCCHH
KLSKEIFAGSTVDLTGHTCTIGTDDYNKKLSFRRAEAVATALKARGVNIGTIEGRGKCCP
HHHHHHHCCCEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCC
ASQDKRQNRRVEIIGIRKEGM
CCCCHHHCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA