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The map label for this gene is traU [H]

Identifier: 118578692

GI number: 118578692

Start: 245699

End: 246721

Strand: Reverse

Name: traU [H]

Synonym: Ppro_0249

Alternate gene names: 118578692

Gene position: 246721-245699 (Counterclockwise)

Preceding gene: 118578693

Following gene: 118578691

Centisome position: 6.16

GC content: 60.02

Gene sequence:

>1023_bases
ATGAACCTGAGCAATAGCATCTCGATCTTCACGCTGGCCATGCTTTTCCTGCTTGCGCCGCTTGCCTACGGAGGCAGTGG
CGCCTGCAGGGGGAAGATGCTCAACCCGGTGACCGATATCTGCTGGCAGTGCATGTTTCCGGTGAAGATCGGCAGCGCTA
CCTTTGGCAATGGCGATGAACCGGCTCCCGGCAACATCACCTCGCCGGTCTGCGTCTGCCCCGACAGCAAGGGGATCCTG
GTTCTGGGATTGTCCACCGCGTTCTGGGAGCATGCCCGGCTGATCGAAACGGTCAGGGAACCTTTCTGCTTTCCGGCACT
GGGAACCGGCATGACAAATCCCAAGCCCGGCTTTTATTCCGGAGAGAACCGGAACGCGGAGTACGGCGATTCCAACCTGG
CATTCCAGCAGGCCCACTACTTCCATTTCCCGGCCTGGTCGATCCTGAAGCTGTTCATGGATTTTCCCTGCTCAGAAAAC
AAGGCCTTCGACTTGGCCTACATGACCGAAGTGGACCCACTGTGGAACGACGACAGCCTGTCGTTCATCATCAATCCCGA
GGCGCTTCTGTTCGGTAATCCGGTGTCACAGTTGGCGTGCGTGGCAGACAGCGTGGCGGCCACGGTGACCCAGCCAGTCG
ATCCCCTGTTCTGGTGCATGGGGAGTTGGGGATCGTTCTACCCCCTGTCGGGGAGCATGGTCGAGAACAATCCCCTCAAC
GTGAACGCCGGCCTGGCGGCACGGATGCTGTTCAAGCTCGGCCGCGAGACGCTCCTTTTTGATACCGGCATCAACCAGTG
CGCCAGCGGCGGGGTCGTGACACCGATTCTGGTCAAGAGCAACTACCGGCTTCAGATGGCGCGTCCGGTGCGGGGCAATG
ACTGCATCCCCATCGGCAGGCCGTCGCTGGTCTGGGGGGCGGCGAAGAACCCTCCCTTTGGAACGGCCAACAACTCGCCG
GACAATTTTCTCTGGTCGTTGACACGAAGGAGGGTGTGTTGCGTCGGCTATGCGCTCAATTGA

Upstream 100 bases:

>100_bases
TCCACTGGCAAAGGAACTGTCGGGCGTTATCCGGCCGGAAAGAGCCGATCGGCCATCATCATCACGGACGAAGGGTCCGA
ATTCAATGTGCGGTATGAGG

Downstream 100 bases:

>100_bases
TCTTCTGGCTCGCTGTAGCCTCGTCCGGTTCGGTTGCCGCCGCCGGCACTCCCGGGTATATCGCCACTCCCGACACCTGC
TGTGTGGTGGACAGGGTGGT

Product: TraU family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MNLSNSISIFTLAMLFLLAPLAYGGSGACRGKMLNPVTDICWQCMFPVKIGSATFGNGDEPAPGNITSPVCVCPDSKGIL
VLGLSTAFWEHARLIETVREPFCFPALGTGMTNPKPGFYSGENRNAEYGDSNLAFQQAHYFHFPAWSILKLFMDFPCSEN
KAFDLAYMTEVDPLWNDDSLSFIINPEALLFGNPVSQLACVADSVAATVTQPVDPLFWCMGSWGSFYPLSGSMVENNPLN
VNAGLAARMLFKLGRETLLFDTGINQCASGGVVTPILVKSNYRLQMARPVRGNDCIPIGRPSLVWGAAKNPPFGTANNSP
DNFLWSLTRRRVCCVGYALN

Sequences:

>Translated_340_residues
MNLSNSISIFTLAMLFLLAPLAYGGSGACRGKMLNPVTDICWQCMFPVKIGSATFGNGDEPAPGNITSPVCVCPDSKGIL
VLGLSTAFWEHARLIETVREPFCFPALGTGMTNPKPGFYSGENRNAEYGDSNLAFQQAHYFHFPAWSILKLFMDFPCSEN
KAFDLAYMTEVDPLWNDDSLSFIINPEALLFGNPVSQLACVADSVAATVTQPVDPLFWCMGSWGSFYPLSGSMVENNPLN
VNAGLAARMLFKLGRETLLFDTGINQCASGGVVTPILVKSNYRLQMARPVRGNDCIPIGRPSLVWGAAKNPPFGTANNSP
DNFLWSLTRRRVCCVGYALN
>Mature_340_residues
MNLSNSISIFTLAMLFLLAPLAYGGSGACRGKMLNPVTDICWQCMFPVKIGSATFGNGDEPAPGNITSPVCVCPDSKGIL
VLGLSTAFWEHARLIETVREPFCFPALGTGMTNPKPGFYSGENRNAEYGDSNLAFQQAHYFHFPAWSILKLFMDFPCSEN
KAFDLAYMTEVDPLWNDDSLSFIINPEALLFGNPVSQLACVADSVAATVTQPVDPLFWCMGSWGSFYPLSGSMVENNPLN
VNAGLAARMLFKLGRETLLFDTGINQCASGGVVTPILVKSNYRLQMARPVRGNDCIPIGRPSLVWGAAKNPPFGTANNSP
DNFLWSLTRRRVCCVGYALN

Specific function: Appears to be more essential to conjugal DNA transfer than to assembly of pilus filaments. Required for F plasmid conjugative transfer [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009649 [H]

Pfam domain/function: PF06834 TraU [H]

EC number: NA

Molecular weight: Translated: 36971; Mature: 36971

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLSNSISIFTLAMLFLLAPLAYGGSGACRGKMLNPVTDICWQCMFPVKIGSATFGNGDE
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCEEECCCCCCCCCC
PAPGNITSPVCVCPDSKGILVLGLSTAFWEHARLIETVREPFCFPALGTGMTNPKPGFYS
CCCCCCCCCEEECCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
GENRNAEYGDSNLAFQQAHYFHFPAWSILKLFMDFPCSENKAFDLAYMTEVDPLWNDDSL
CCCCCCCCCCCCCEEECCEEEECCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCE
SFIINPEALLFGNPVSQLACVADSVAATVTQPVDPLFWCMGSWGSFYPLSGSMVENNPLN
EEEECCCEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCEECCCCCE
VNAGLAARMLFKLGRETLLFDTGINQCASGGVVTPILVKSNYRLQMARPVRGNDCIPIGR
ECCHHHHHHHHHHCCCEEEEECCHHHHHCCCCEEEEEEECCCEEEEECCCCCCCCEECCC
PSLVWGAAKNPPFGTANNSPDNFLWSLTRRRVCCVGYALN
CCEEECCCCCCCCCCCCCCCHHHHHHHHHCEEEEEEEECC
>Mature Secondary Structure
MNLSNSISIFTLAMLFLLAPLAYGGSGACRGKMLNPVTDICWQCMFPVKIGSATFGNGDE
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCEEECCCCCCCCCC
PAPGNITSPVCVCPDSKGILVLGLSTAFWEHARLIETVREPFCFPALGTGMTNPKPGFYS
CCCCCCCCCEEECCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
GENRNAEYGDSNLAFQQAHYFHFPAWSILKLFMDFPCSENKAFDLAYMTEVDPLWNDDSL
CCCCCCCCCCCCCEEECCEEEECCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCE
SFIINPEALLFGNPVSQLACVADSVAATVTQPVDPLFWCMGSWGSFYPLSGSMVENNPLN
EEEECCCEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCEECCCCCE
VNAGLAARMLFKLGRETLLFDTGINQCASGGVVTPILVKSNYRLQMARPVRGNDCIPIGR
ECCHHHHHHHHHHCCCEEEEECCHHHHHCCCCEEEEEEECCCEEEEECCCCCCCCEECCC
PSLVWGAAKNPPFGTANNSPDNFLWSLTRRRVCCVGYALN
CCEEECCCCCCCCCCCCCCCHHHHHHHHHCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2198250; 7915817; 2050638; 1355084 [H]