| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118578682
Identifier: 118578682
GI number: 118578682
Start: 232362
End: 235046
Strand: Reverse
Name: 118578682
Synonym: Ppro_0239
Alternate gene names: NA
Gene position: 235046-232362 (Counterclockwise)
Preceding gene: 118578683
Following gene: 118578681
Centisome position: 5.86
GC content: 46.15
Gene sequence:
>2685_bases ATGGTTGAGCAACAGACCGATATAAAGCCACTTGCTGGTGAGGTACTGGAAAATTTCGAAAGAATATCATCACTTGCGAA ATCAAAGCTTAATGAGGGTGCAGTTGCTGGCACCAACGCTTTCGCGAGCATAAATACAATGACCTCAAACTCTACTGAGA GGCTTGACCAGATAAGTAGTGCTAACCGAGAGAGTTATAAAGTATTGAGCTCGGAGCCGGCAATTGCACGAATAATGGTT GCAGATCGGGCTGGAGGAAAGAAGGCTTACTATATTTGCCGTACTACGGCGGTTTCAGGCATTCCGAATCTTGCTAGTTA CTTAGCACCTATTGGCCGATTAGGTTCCCTGGAAGTTGGGGAAGAATTTAAACTGCCAAACGGCACGGTAGTTGAGGTAT TAGAGCGCTCACGCCTTCATCCCCGTTTGGAGCATGATGGATGGGATTCACGTGGTACCATCGTTGAAACAGAGCAAATT GGACCAATTACCATTGAGTCTCTGAGGCTATTGCTGGATGCAGCGGGTCGCGAAGAATTTACAGATGATTTGTTGGAACA AATCCTTGCGGAGGAGAATCAAAAAGGAAATATTATAGACGGCATACGACGTAGCGTTATTACAAAAATGGGGCTCAGGG ATCAACCAATTCTTGATCGATACCAAGATGAAATTTTTCGTCTGCCGCTTGACAATAGACTATTCATCTTCGGCCCACCG GGAACTGGAAAGACAACAACTCTCATAAGACGCTTGGGCCAAAAGCTCGATTCTGCATTCTTGGACGACAGCGAAAAACG TCTGGTGGAAAATGTTGGTAGTGTCTTGTCGCACCGTGACTCATGGCTTATGTTCACGCCGACAGAATTGCTGAAGCAGT ATCTGAAAGAGGCCTTTGCCAGAGAAGGGGTTCCTGCTTCGGATTTGCGTATTAGAACTTGGTATGAGTATAGGCGAGAG TTGGCCAGAAATTCCTTTGGAGTGCTCAGGACTGCTTCCGGCGGTGGCACTTTTGTACTTAAAGACGCAATTGGAAGCCT AGGTAATGATTCTCTCGGGCGGCCTATCGAGTGGTATGAAGATTTCAATTCCTGGCAAAAAATATCTTTCATGGATTCAT TGGTTGATTCAGCGAGGTTTCTTGCTCAGTCGGATATAAAAACTGCCCAAAACCTTGAAGGTAAGGTTTCACGTATTCTT ACAGAAATGGAGAAGAATGGACTGGTCTCAACTTTTGAGTCATTGGCAGGATTGATTCCGCAAATACAGGAGTTGGTTGG AAATTTGAAGGAAGATTCCGACAAAAAGATCAAAGCCGCCCTGAACTATCAACTAAATCACGATAGAAGCTTTCTGGACG AATTTGCACGTTTTCTTGACGGGCTACAACAGGCTCAAGTCGTGGATACTGATGATCAGGATGATCTTGAAGTTGATGAG GAAGACGATACATCTTCACCGCGCACGGGAAGAGCCGCCGCACTTTCAACATACATGCAAGCGGTTAGAGCCCACGCTCG GTCTGTAGCTTCAAAACGATCACTGGGCAAGACAACTCGTTACGGGAAAATTATCGATTGGCTTGGCGATCGCATCTTGC CCGAATCGAATAGAGTTGAAGTAGGAACAAGTCTCTTGTTACAGGCGAGTGCACGACGTTTTGTAAACCCTGTTAAACGA TACATCGATGGAATCCCCAAACGGTATCGAACGTTCAGGAGAATCCGCCAAGAGGAAGGCATTTGGTATCAGAAGGAAGC TTTTGAATCACGAGACCTTCATCCTCTAGAACTGGATCTGCTATTGCTGAGCATTCTCCGGGCATCAACTGACATACTCA AGCGCCCCAATGTACAACGGAATATCAATAATCAACCATGGACATCTCTCAGGCCGACGCTTGATCTGTACCGAAATCAG GTTTTGGTTGACGAGGTTACAGATTTTTCTCCGCTGCAGCTTGGGTGCATGTCTACCTTGGCTCATCCTCAATTGCGGTC ATTTTTTGCATGCGGCGACTTCCACCAGCGGTTGACTACGTGGGGAACAACAACAATTGACGAATTAAAATGGGTTATGC CGGACTTCGAGGTGCGGGAGATAACGGTTGCGTATCGACAAAGCAAGCAACTTAACGAGTTTGCACGTGGAATTATCAGA ACAGTGCATGGCGAGGAGCAGACAGTTACCTTGCCGAAACATGTCGATAATAACGGTGTAGCACCTGCGCTTCTTGAGTT TGCCGACGATGAAAAAGTGGTTAGTTGGTTGGCTGAGCGGATCAAGGAGATCGAGTGTTTTGTTGGTCAGCTGCCATCTA TAGCAATATTTGTTAATAGCGAGAATGATGTCTCGCGTGTTGCAGAAGCGTTACACGAAAAGCTTGCCGAGAGCAATATT CCCGTAACAGCATGCAAGGAAGGGCAGACTGTCGGGCAGGAGAGCAACGTTAGGGTTTTTGATGTGCAACACATTAAGGG CCTTGAGTTCGAGGTAGTGTTTTTCGTAGATATCGACAAGCTTGCTACTTTGCACCCTCAACTATTTGATAAGTATTTGT ATGTCGGTACTACCCGCGCTGCAACCTATCTTGGATTGACTTGCATTGATAAGCTTCCGTCCCCGATAGATACGATGAGA GAAATGTTTGTCACTGGGTGGGCAAGTTTAATGGTTGCATCATGA
Upstream 100 bases:
>100_bases GGTACCCATGCTATCAAAGGGGAGTTTGCGGGGATCAACGATTTTGAGGTAGTTGCATACTTGGTGATTTTGGATGATTT GCGATATGGAGGAGGGCAGA
Downstream 100 bases:
>100_bases TTCCTGATGATTTCATTGGTGCATTGGGGCTCCCCGATAGCGCGCTGGTAAACCAGCGAGTGCCGAAAAAGATGCTGGTG GAGAATGGCGCGCCGACCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 894; Mature: 894
Protein sequence:
>894_residues MVEQQTDIKPLAGEVLENFERISSLAKSKLNEGAVAGTNAFASINTMTSNSTERLDQISSANRESYKVLSSEPAIARIMV ADRAGGKKAYYICRTTAVSGIPNLASYLAPIGRLGSLEVGEEFKLPNGTVVEVLERSRLHPRLEHDGWDSRGTIVETEQI GPITIESLRLLLDAAGREEFTDDLLEQILAEENQKGNIIDGIRRSVITKMGLRDQPILDRYQDEIFRLPLDNRLFIFGPP GTGKTTTLIRRLGQKLDSAFLDDSEKRLVENVGSVLSHRDSWLMFTPTELLKQYLKEAFAREGVPASDLRIRTWYEYRRE LARNSFGVLRTASGGGTFVLKDAIGSLGNDSLGRPIEWYEDFNSWQKISFMDSLVDSARFLAQSDIKTAQNLEGKVSRIL TEMEKNGLVSTFESLAGLIPQIQELVGNLKEDSDKKIKAALNYQLNHDRSFLDEFARFLDGLQQAQVVDTDDQDDLEVDE EDDTSSPRTGRAAALSTYMQAVRAHARSVASKRSLGKTTRYGKIIDWLGDRILPESNRVEVGTSLLLQASARRFVNPVKR YIDGIPKRYRTFRRIRQEEGIWYQKEAFESRDLHPLELDLLLLSILRASTDILKRPNVQRNINNQPWTSLRPTLDLYRNQ VLVDEVTDFSPLQLGCMSTLAHPQLRSFFACGDFHQRLTTWGTTTIDELKWVMPDFEVREITVAYRQSKQLNEFARGIIR TVHGEEQTVTLPKHVDNNGVAPALLEFADDEKVVSWLAERIKEIECFVGQLPSIAIFVNSENDVSRVAEALHEKLAESNI PVTACKEGQTVGQESNVRVFDVQHIKGLEFEVVFFVDIDKLATLHPQLFDKYLYVGTTRAATYLGLTCIDKLPSPIDTMR EMFVTGWASLMVAS
Sequences:
>Translated_894_residues MVEQQTDIKPLAGEVLENFERISSLAKSKLNEGAVAGTNAFASINTMTSNSTERLDQISSANRESYKVLSSEPAIARIMV ADRAGGKKAYYICRTTAVSGIPNLASYLAPIGRLGSLEVGEEFKLPNGTVVEVLERSRLHPRLEHDGWDSRGTIVETEQI GPITIESLRLLLDAAGREEFTDDLLEQILAEENQKGNIIDGIRRSVITKMGLRDQPILDRYQDEIFRLPLDNRLFIFGPP GTGKTTTLIRRLGQKLDSAFLDDSEKRLVENVGSVLSHRDSWLMFTPTELLKQYLKEAFAREGVPASDLRIRTWYEYRRE LARNSFGVLRTASGGGTFVLKDAIGSLGNDSLGRPIEWYEDFNSWQKISFMDSLVDSARFLAQSDIKTAQNLEGKVSRIL TEMEKNGLVSTFESLAGLIPQIQELVGNLKEDSDKKIKAALNYQLNHDRSFLDEFARFLDGLQQAQVVDTDDQDDLEVDE EDDTSSPRTGRAAALSTYMQAVRAHARSVASKRSLGKTTRYGKIIDWLGDRILPESNRVEVGTSLLLQASARRFVNPVKR YIDGIPKRYRTFRRIRQEEGIWYQKEAFESRDLHPLELDLLLLSILRASTDILKRPNVQRNINNQPWTSLRPTLDLYRNQ VLVDEVTDFSPLQLGCMSTLAHPQLRSFFACGDFHQRLTTWGTTTIDELKWVMPDFEVREITVAYRQSKQLNEFARGIIR TVHGEEQTVTLPKHVDNNGVAPALLEFADDEKVVSWLAERIKEIECFVGQLPSIAIFVNSENDVSRVAEALHEKLAESNI PVTACKEGQTVGQESNVRVFDVQHIKGLEFEVVFFVDIDKLATLHPQLFDKYLYVGTTRAATYLGLTCIDKLPSPIDTMR EMFVTGWASLMVAS >Mature_894_residues MVEQQTDIKPLAGEVLENFERISSLAKSKLNEGAVAGTNAFASINTMTSNSTERLDQISSANRESYKVLSSEPAIARIMV ADRAGGKKAYYICRTTAVSGIPNLASYLAPIGRLGSLEVGEEFKLPNGTVVEVLERSRLHPRLEHDGWDSRGTIVETEQI GPITIESLRLLLDAAGREEFTDDLLEQILAEENQKGNIIDGIRRSVITKMGLRDQPILDRYQDEIFRLPLDNRLFIFGPP GTGKTTTLIRRLGQKLDSAFLDDSEKRLVENVGSVLSHRDSWLMFTPTELLKQYLKEAFAREGVPASDLRIRTWYEYRRE LARNSFGVLRTASGGGTFVLKDAIGSLGNDSLGRPIEWYEDFNSWQKISFMDSLVDSARFLAQSDIKTAQNLEGKVSRIL TEMEKNGLVSTFESLAGLIPQIQELVGNLKEDSDKKIKAALNYQLNHDRSFLDEFARFLDGLQQAQVVDTDDQDDLEVDE EDDTSSPRTGRAAALSTYMQAVRAHARSVASKRSLGKTTRYGKIIDWLGDRILPESNRVEVGTSLLLQASARRFVNPVKR YIDGIPKRYRTFRRIRQEEGIWYQKEAFESRDLHPLELDLLLLSILRASTDILKRPNVQRNINNQPWTSLRPTLDLYRNQ VLVDEVTDFSPLQLGCMSTLAHPQLRSFFACGDFHQRLTTWGTTTIDELKWVMPDFEVREITVAYRQSKQLNEFARGIIR TVHGEEQTVTLPKHVDNNGVAPALLEFADDEKVVSWLAERIKEIECFVGQLPSIAIFVNSENDVSRVAEALHEKLAESNI PVTACKEGQTVGQESNVRVFDVQHIKGLEFEVVFFVDIDKLATLHPQLFDKYLYVGTTRAATYLGLTCIDKLPSPIDTMR EMFVTGWASLMVAS
Specific function: Unknown
COG id: COG0210
COG function: function code L; Superfamily I DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 100783; Mature: 100783
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEQQTDIKPLAGEVLENFERISSLAKSKLNEGAVAGTNAFASINTMTSNSTERLDQISS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHH ANRESYKVLSSEPAIARIMVADRAGGKKAYYICRTTAVSGIPNLASYLAPIGRLGSLEVG CCCHHHHHHCCCCCEEEEEEEECCCCCEEEEEEEHHHHCCCHHHHHHHHHHHCCCCCCCC EEFKLPNGTVVEVLERSRLHPRLEHDGWDSRGTIVETEQIGPITIESLRLLLDAAGREEF CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCHHH TDDLLEQILAEENQKGNIIDGIRRSVITKMGLRDQPILDRYQDEIFRLPLDNRLFIFGPP HHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHEECCCCCEEEEECCC GTGKTTTLIRRLGQKLDSAFLDDSEKRLVENVGSVLSHRDSWLMFTPTELLKQYLKEAFA CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHH REGVPASDLRIRTWYEYRRELARNSFGVLRTASGGGTFVLKDAIGSLGNDSLGRPIEWYE HCCCCCCCCEEHHHHHHHHHHHHCCCCEEEECCCCCEEEEHHHHCCCCCCCCCCCHHHHH DFNSWQKISFMDSLVDSARFLAQSDIKTAQNLEGKVSRILTEMEKNGLVSTFESLAGLIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH QIQELVGNLKEDSDKKIKAALNYQLNHDRSFLDEFARFLDGLQQAQVVDTDDQDDLEVDE HHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCC EDDTSSPRTGRAAALSTYMQAVRAHARSVASKRSLGKTTRYGKIIDWLGDRILPESNRVE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCH VGTSLLLQASARRFVNPVKRYIDGIPKRYRTFRRIRQEEGIWYQKEAFESRDLHPLELDL HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEHHHHHCCCCCCCHHHHH LLLSILRASTDILKRPNVQRNINNQPWTSLRPTLDLYRNQVLVDEVTDFSPLQLGCMSTL HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCEEHHHHCCCCCCHHHHHHHHH AHPQLRSFFACGDFHQRLTTWGTTTIDELKWVMPDFEVREITVAYRQSKQLNEFARGIIR CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH TVHGEEQTVTLPKHVDNNGVAPALLEFADDEKVVSWLAERIKEIECFVGQLPSIAIFVNS HHCCCCCEEECCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC ENDVSRVAEALHEKLAESNIPVTACKEGQTVGQESNVRVFDVQHIKGLEFEVVFFVDIDK CCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEHHH LATLHPQLFDKYLYVGTTRAATYLGLTCIDKLPSPIDTMREMFVTGWASLMVAS HHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVEQQTDIKPLAGEVLENFERISSLAKSKLNEGAVAGTNAFASINTMTSNSTERLDQISS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHH ANRESYKVLSSEPAIARIMVADRAGGKKAYYICRTTAVSGIPNLASYLAPIGRLGSLEVG CCCHHHHHHCCCCCEEEEEEEECCCCCEEEEEEEHHHHCCCHHHHHHHHHHHCCCCCCCC EEFKLPNGTVVEVLERSRLHPRLEHDGWDSRGTIVETEQIGPITIESLRLLLDAAGREEF CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCHHH TDDLLEQILAEENQKGNIIDGIRRSVITKMGLRDQPILDRYQDEIFRLPLDNRLFIFGPP HHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHEECCCCCEEEEECCC GTGKTTTLIRRLGQKLDSAFLDDSEKRLVENVGSVLSHRDSWLMFTPTELLKQYLKEAFA CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHH REGVPASDLRIRTWYEYRRELARNSFGVLRTASGGGTFVLKDAIGSLGNDSLGRPIEWYE HCCCCCCCCEEHHHHHHHHHHHHCCCCEEEECCCCCEEEEHHHHCCCCCCCCCCCHHHHH DFNSWQKISFMDSLVDSARFLAQSDIKTAQNLEGKVSRILTEMEKNGLVSTFESLAGLIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH QIQELVGNLKEDSDKKIKAALNYQLNHDRSFLDEFARFLDGLQQAQVVDTDDQDDLEVDE HHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCC EDDTSSPRTGRAAALSTYMQAVRAHARSVASKRSLGKTTRYGKIIDWLGDRILPESNRVE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCH VGTSLLLQASARRFVNPVKRYIDGIPKRYRTFRRIRQEEGIWYQKEAFESRDLHPLELDL HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEHHHHHCCCCCCCHHHHH LLLSILRASTDILKRPNVQRNINNQPWTSLRPTLDLYRNQVLVDEVTDFSPLQLGCMSTL HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCEEHHHHCCCCCCHHHHHHHHH AHPQLRSFFACGDFHQRLTTWGTTTIDELKWVMPDFEVREITVAYRQSKQLNEFARGIIR CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH TVHGEEQTVTLPKHVDNNGVAPALLEFADDEKVVSWLAERIKEIECFVGQLPSIAIFVNS HHCCCCCEEECCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC ENDVSRVAEALHEKLAESNIPVTACKEGQTVGQESNVRVFDVQHIKGLEFEVVFFVDIDK CCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEHHH LATLHPQLFDKYLYVGTTRAATYLGLTCIDKLPSPIDTMREMFVTGWASLMVAS HHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA