| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118578605
Identifier: 118578605
GI number: 118578605
Start: 167022
End: 168314
Strand: Reverse
Name: 118578605
Synonym: Ppro_0161
Alternate gene names: NA
Gene position: 168314-167022 (Counterclockwise)
Preceding gene: 118578606
Following gene: 118578604
Centisome position: 4.2
GC content: 57.54
Gene sequence:
>1293_bases ATGTCGAGTGAAAGAGCTCTCATCTCTGCCCTCCAGGCTTATAACACATTTACCGTCACCTCAGCACCGTTCAGCGACTA TGTCCACCTGATCCACCCCGGCGACTTTGGCTCGTGGCTGGGGATGCTGAACGCCGACCAAATCGGGGTACCCCCACGCG CACCGCTCATGGGACTCACAGCCGAGGTATCAGGCGCAACGCTTCTCATCGGTGATGCCGACGGCGCCATCCTGGTCGAT CCGGGCAGGTATACTCCAATGCCGCTCCAGAGTAGGCCCCCTCTGGCCATTGTGATCACCCACGCACACAGGGATCACTT CGACGGCCTATCCGATGCTTTGCAAAGTTGGAAGGATGTCCCGGTCTACCTCAGTGAAATTACTCGCACGCTGCTGACGG ACTCATTGCAGCGCGACAATGCCAACGCCCTGGCCAGGGAACTCTCGGAACGAGCGATACTCGTTGCTCCCGACGCCACT CTCACCGTGGGGCGTTTCCGCATGACCGCCTACGATGCCGGACATTGCTTGGGAGCGACCGCCGTCCACCTAGAGGATGC TGAGACTGGTCAGGGAATCTTGATAGCCGGCGAGTTCAGCCGAAGGAAAGTAGGCAGCGTCTGTCATAAAATTCCGCAGC TCTCGGTCAATACCCTCTTCGTCGAGGCCATACACGCCGACGACCATCTGCCGACCGGCGTCAACGGTCAGAACAACGTT GAGTTCACCTCCAAGCTTGATGCCGCCTATGCCCAAGGAAAGACCATCGTCATCGCTGCGGCGTCTCTGGCAGAGATGCA GGAAGTCTACGCCATCTGCGCGCTCCATCAGCGGCGCGGCGGACTCCCGGAGTACCCTCTGTACGTCGGGAACCTCCGCC CCGTGATGAAGAGCGCTTTGAAGCATCTCGAGAGAGTGGAACCGTGGGACCTCGATGTCACTTTCACTAACTCCATTCAG GAAGAAGCCATAAATATCCTCACCTGCGCCTTCGAGGGACAAACGGACGACGGGCACTTCTCCAGTGCCTATGCGCAGGA CTCGGCTAACGAAGATATTCTCTGGCTCTATCCCGAAAGGTATTCCGCTCTAAAGCCTGAAAAGGCAGCACTCTACCGCG TATTTACCCATGCAAGCCTCTGTGAGATAGGAGAGATGGTCCTAGTTCAAAAGCCGGCAAATGTTTGCCTTTACTCCGGC GGATGTCATGGCAGTGTGTTGGCGGGGTTCCTTGCGAGGTCAGGGTTTGCCCTTCACGATTTTTCGGGCGCGGCAGGCAG TTTCCACTTTTGA
Upstream 100 bases:
>100_bases GGCACGCCTACAGAGCAACTCTTTGCCGCCATAGCTGCCGAACGGTGCGGGGAGTCGGGGAGTCCCGACCGTTTCCTCGA GGCTTGGGAGAACTTCATTG
Downstream 100 bases:
>100_bases AAGCATCAAGACGAGGAGAATGTCAATGGGACCCTACAGCAAACACAAAAACGACAGGGAGCGAGGCAAACACTCGCCTT CCCATTTCCCCGTCAAAGAC
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 430; Mature: 429
Protein sequence:
>430_residues MSSERALISALQAYNTFTVTSAPFSDYVHLIHPGDFGSWLGMLNADQIGVPPRAPLMGLTAEVSGATLLIGDADGAILVD PGRYTPMPLQSRPPLAIVITHAHRDHFDGLSDALQSWKDVPVYLSEITRTLLTDSLQRDNANALARELSERAILVAPDAT LTVGRFRMTAYDAGHCLGATAVHLEDAETGQGILIAGEFSRRKVGSVCHKIPQLSVNTLFVEAIHADDHLPTGVNGQNNV EFTSKLDAAYAQGKTIVIAAASLAEMQEVYAICALHQRRGGLPEYPLYVGNLRPVMKSALKHLERVEPWDLDVTFTNSIQ EEAINILTCAFEGQTDDGHFSSAYAQDSANEDILWLYPERYSALKPEKAALYRVFTHASLCEIGEMVLVQKPANVCLYSG GCHGSVLAGFLARSGFALHDFSGAAGSFHF
Sequences:
>Translated_430_residues MSSERALISALQAYNTFTVTSAPFSDYVHLIHPGDFGSWLGMLNADQIGVPPRAPLMGLTAEVSGATLLIGDADGAILVD PGRYTPMPLQSRPPLAIVITHAHRDHFDGLSDALQSWKDVPVYLSEITRTLLTDSLQRDNANALARELSERAILVAPDAT LTVGRFRMTAYDAGHCLGATAVHLEDAETGQGILIAGEFSRRKVGSVCHKIPQLSVNTLFVEAIHADDHLPTGVNGQNNV EFTSKLDAAYAQGKTIVIAAASLAEMQEVYAICALHQRRGGLPEYPLYVGNLRPVMKSALKHLERVEPWDLDVTFTNSIQ EEAINILTCAFEGQTDDGHFSSAYAQDSANEDILWLYPERYSALKPEKAALYRVFTHASLCEIGEMVLVQKPANVCLYSG GCHGSVLAGFLARSGFALHDFSGAAGSFHF >Mature_429_residues SSERALISALQAYNTFTVTSAPFSDYVHLIHPGDFGSWLGMLNADQIGVPPRAPLMGLTAEVSGATLLIGDADGAILVDP GRYTPMPLQSRPPLAIVITHAHRDHFDGLSDALQSWKDVPVYLSEITRTLLTDSLQRDNANALARELSERAILVAPDATL TVGRFRMTAYDAGHCLGATAVHLEDAETGQGILIAGEFSRRKVGSVCHKIPQLSVNTLFVEAIHADDHLPTGVNGQNNVE FTSKLDAAYAQGKTIVIAAASLAEMQEVYAICALHQRRGGLPEYPLYVGNLRPVMKSALKHLERVEPWDLDVTFTNSIQE EAINILTCAFEGQTDDGHFSSAYAQDSANEDILWLYPERYSALKPEKAALYRVFTHASLCEIGEMVLVQKPANVCLYSGG CHGSVLAGFLARSGFALHDFSGAAGSFHF
Specific function: Unknown
COG id: COG1782
COG function: function code R; Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46551; Mature: 46420
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSERALISALQAYNTFTVTSAPFSDYVHLIHPGDFGSWLGMLNADQIGVPPRAPLMGLT CCCHHHHHHHHHHCCEEEEECCCHHCCEEEEECCCHHHHHHCCCCCCCCCCCCCCCEEEE AEVSGATLLIGDADGAILVDPGRYTPMPLQSRPPLAIVITHAHRDHFDGLSDALQSWKDV EECCCCEEEEECCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCC PVYLSEITRTLLTDSLQRDNANALARELSERAILVAPDATLTVGRFRMTAYDAGHCLGAT CHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEECCCCEEEEEEEEEEEECCCCCCCCE AVHLEDAETGQGILIAGEFSRRKVGSVCHKIPQLSVNTLFVEAIHADDHLPTGVNGQNNV EEEEECCCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCC EFTSKLDAAYAQGKTIVIAAASLAEMQEVYAICALHQRRGGLPEYPLYVGNLRPVMKSAL CHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHH KHLERVEPWDLDVTFTNSIQEEAINILTCAFEGQTDDGHFSSAYAQDSANEDILWLYPER HHHHHCCCCCEEEEECCCHHHHHEEEEEEEECCCCCCCCCCHHHHCCCCCCCEEEECCCH YSALKPEKAALYRVFTHASLCEIGEMVLVQKPANVCLYSGGCHGSVLAGFLARSGFALHD HCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEECCCCHHHHHHHHHHCCCEEEE FSGAAGSFHF CCCCCCCCCC >Mature Secondary Structure SSERALISALQAYNTFTVTSAPFSDYVHLIHPGDFGSWLGMLNADQIGVPPRAPLMGLT CCHHHHHHHHHHCCEEEEECCCHHCCEEEEECCCHHHHHHCCCCCCCCCCCCCCCEEEE AEVSGATLLIGDADGAILVDPGRYTPMPLQSRPPLAIVITHAHRDHFDGLSDALQSWKDV EECCCCEEEEECCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCC PVYLSEITRTLLTDSLQRDNANALARELSERAILVAPDATLTVGRFRMTAYDAGHCLGAT CHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEECCCCEEEEEEEEEEEECCCCCCCCE AVHLEDAETGQGILIAGEFSRRKVGSVCHKIPQLSVNTLFVEAIHADDHLPTGVNGQNNV EEEEECCCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCC EFTSKLDAAYAQGKTIVIAAASLAEMQEVYAICALHQRRGGLPEYPLYVGNLRPVMKSAL CHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHH KHLERVEPWDLDVTFTNSIQEEAINILTCAFEGQTDDGHFSSAYAQDSANEDILWLYPER HHHHHCCCCCEEEEECCCHHHHHEEEEEEEECCCCCCCCCCHHHHCCCCCCCEEEECCCH YSALKPEKAALYRVFTHASLCEIGEMVLVQKPANVCLYSGGCHGSVLAGFLARSGFALHD HCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEECCCCHHHHHHHHHHCCCEEEE FSGAAGSFHF CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA