| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
Click here to switch to the map view.
The map label for this gene is 118578603
Identifier: 118578603
GI number: 118578603
Start: 165116
End: 166237
Strand: Reverse
Name: 118578603
Synonym: Ppro_0159
Alternate gene names: NA
Gene position: 166237-165116 (Counterclockwise)
Preceding gene: 118578604
Following gene: 118578602
Centisome position: 4.15
GC content: 53.3
Gene sequence:
>1122_bases ATGTCTGAGAATATGAACATTGTTGATTTGATTGATGAGATGCTCAAGCACACCAGAGATGGGAAAGACAATGTCATCGC CGAAGTAAAACGCACGCTCGATGACCACGGTGGCGAGGTGCTGAATGTCTTTGCCTCCAAGCTCTCGGAACTGGAGTCCC CGCCCTTCGTTACGCCCATCTCCCTCGTTAAAAAACTCGACGCGGTTCATGCGGAGGTTGGTACCGATATCAGGACCGGT GCCGAGAAGGTGCGTGAGGAAGTGAAGGACCTGAACAGGAGGATCGAGACCCTGGGTGAATACTTCAAAAGCGACTTTTC CGCCCTGAGGACGAAGACTGAGGATAGCTGGAAGGGCATCGACGTGCGTGTCGATGCCCTCGTAGACGGGGAGCAGGCCC TTCGCATGAAGCTCTCCGAACAGGAGAAACACTTTAATAACAGAATCGACGATCTTCAGAAGGTGATCGAGGAGCAAAGG CGCTTGATCGAATCACTGCAGGTGGAGATCACCAGCAGGATCGAAAAAGCCGGCGCCGAAACCCGCGAGATGGTGACCCG CGTGGAAGATTCCGGCCGCGCTTCTCTCGCAAGTGCCCGCGAGGAAATATTGGCCAACGCCTCGCGGCTGGATGGCAGGC ACCAGGCGACTGTGGAGGTGGTTAACCACCTCCACAAGCTCCTCGACTCGGCAAAGGGGCCATTAGGAGGTAAGCTCTTC AAGACTCAAGAGCAGGAAGAATTGCTGCTGAAGGTTCTAGCGTACACACAGGGAAAGGAGCCAAAAAGCTCCGTGCTGTC TTCAGTCCTTTCCGCAACTCAACCGATCACCGAGCAGGCCAAAGAAGATGCCGCTGCTGCGGGCTCTGTTGACAAAACGG CGGATGCAGCTGGCGACAAGGCAATCATCGGGGCGATTCTCGCTGCATTGAAGGAATACAGCAGCAGCGAAACGGGTGCT ATAGAGTTAGCCGAAGAGAAGATCGAAAACGTCATCTCCAACAATAGGAGTCGCGAAGCTATCGAAAAGAACCTTTGGAA CGTGAAAATATGGAAGAAATTTGACGGGCTTGAGGAAAAGAATTGGAAACGGATTGTAAGTAGCTCACTCGGGAGAAGCT AA
Upstream 100 bases:
>100_bases GGTGGCGCAGAGAGGGTGGTGTGAAGCGGACGGCGGGCGGATCTGGGTCGAGGCGAGATTGTCGGTAGTAGGCGAGTGAC AAATTTTTCTAGGGGGGCAA
Downstream 100 bases:
>100_bases CCATGTCGCGCTCCGCTCCGACCGCCGTGGTAAACGAGCTGAACAAGAAGATTCTCCTCCAGCAGCGTGAGAACAATAAG TCTGCAGAGACGATCGAACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 373; Mature: 372
Protein sequence:
>373_residues MSENMNIVDLIDEMLKHTRDGKDNVIAEVKRTLDDHGGEVLNVFASKLSELESPPFVTPISLVKKLDAVHAEVGTDIRTG AEKVREEVKDLNRRIETLGEYFKSDFSALRTKTEDSWKGIDVRVDALVDGEQALRMKLSEQEKHFNNRIDDLQKVIEEQR RLIESLQVEITSRIEKAGAETREMVTRVEDSGRASLASAREEILANASRLDGRHQATVEVVNHLHKLLDSAKGPLGGKLF KTQEQEELLLKVLAYTQGKEPKSSVLSSVLSATQPITEQAKEDAAAAGSVDKTADAAGDKAIIGAILAALKEYSSSETGA IELAEEKIENVISNNRSREAIEKNLWNVKIWKKFDGLEEKNWKRIVSSSLGRS
Sequences:
>Translated_373_residues MSENMNIVDLIDEMLKHTRDGKDNVIAEVKRTLDDHGGEVLNVFASKLSELESPPFVTPISLVKKLDAVHAEVGTDIRTG AEKVREEVKDLNRRIETLGEYFKSDFSALRTKTEDSWKGIDVRVDALVDGEQALRMKLSEQEKHFNNRIDDLQKVIEEQR RLIESLQVEITSRIEKAGAETREMVTRVEDSGRASLASAREEILANASRLDGRHQATVEVVNHLHKLLDSAKGPLGGKLF KTQEQEELLLKVLAYTQGKEPKSSVLSSVLSATQPITEQAKEDAAAAGSVDKTADAAGDKAIIGAILAALKEYSSSETGA IELAEEKIENVISNNRSREAIEKNLWNVKIWKKFDGLEEKNWKRIVSSSLGRS >Mature_372_residues SENMNIVDLIDEMLKHTRDGKDNVIAEVKRTLDDHGGEVLNVFASKLSELESPPFVTPISLVKKLDAVHAEVGTDIRTGA EKVREEVKDLNRRIETLGEYFKSDFSALRTKTEDSWKGIDVRVDALVDGEQALRMKLSEQEKHFNNRIDDLQKVIEEQRR LIESLQVEITSRIEKAGAETREMVTRVEDSGRASLASAREEILANASRLDGRHQATVEVVNHLHKLLDSAKGPLGGKLFK TQEQEELLLKVLAYTQGKEPKSSVLSSVLSATQPITEQAKEDAAAAGSVDKTADAAGDKAIIGAILAALKEYSSSETGAI ELAEEKIENVISNNRSREAIEKNLWNVKIWKKFDGLEEKNWKRIVSSSLGRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41438; Mature: 41307
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSENMNIVDLIDEMLKHTRDGKDNVIAEVKRTLDDHGGEVLNVFASKLSELESPPFVTPI CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHH SLVKKLDAVHAEVGTDIRTGAEKVREEVKDLNRRIETLGEYFKSDFSALRTKTEDSWKGI HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC DVRVDALVDGEQALRMKLSEQEKHFNNRIDDLQKVIEEQRRLIESLQVEITSRIEKAGAE CEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH TREMVTRVEDSGRASLASAREEILANASRLDGRHQATVEVVNHLHKLLDSAKGPLGGKLF HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHH KTQEQEELLLKVLAYTQGKEPKSSVLSSVLSATQPITEQAKEDAAAAGSVDKTADAAGDK CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCH AIIGAILAALKEYSSSETGAIELAEEKIENVISNNRSREAIEKNLWNVKIWKKFDGLEEK HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEHHHHHCCCCHH NWKRIVSSSLGRS HHHHHHHHHCCCC >Mature Secondary Structure SENMNIVDLIDEMLKHTRDGKDNVIAEVKRTLDDHGGEVLNVFASKLSELESPPFVTPI CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHH SLVKKLDAVHAEVGTDIRTGAEKVREEVKDLNRRIETLGEYFKSDFSALRTKTEDSWKGI HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC DVRVDALVDGEQALRMKLSEQEKHFNNRIDDLQKVIEEQRRLIESLQVEITSRIEKAGAE CEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH TREMVTRVEDSGRASLASAREEILANASRLDGRHQATVEVVNHLHKLLDSAKGPLGGKLF HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHH KTQEQEELLLKVLAYTQGKEPKSSVLSSVLSATQPITEQAKEDAAAAGSVDKTADAAGDK CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCH AIIGAILAALKEYSSSETGAIELAEEKIENVISNNRSREAIEKNLWNVKIWKKFDGLEEK HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEHHHHHCCCCHH NWKRIVSSSLGRS HHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA