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The map label for this gene is dnaC [H]

Identifier: 118480496

GI number: 118480496

Start: 5238488

End: 5239855

Strand: Reverse

Name: dnaC [H]

Synonym: BALH_4975

Alternate gene names: 118480496

Gene position: 5239855-5238488 (Counterclockwise)

Preceding gene: 118480497

Following gene: 118480495

Centisome position: 99.67

GC content: 40.79

Gene sequence:

>1368_bases
TTGCGTATGAGTGATGTAATGGCTGATCGTACCCCTCCGCATAATATAGAAGCCGAGCAGGCAGTCCTAGGTGCTATATT
GATTGATCAGGATGCATTAACTTCAGCATCGGAACTATTGGTACCTGACTCATTTTATCGAACAAAACATCAAAAGATTT
TTGAAGTTATGCTTGGATTATCGGATAAGGGGGAACCAATCGACTTAGTAATGATGACGTCAGCGATGGCTGATCAGGGA
TTACTAGAAGAAGTTGGTGGGGTTTCTTACTTAGCAGAATTAGCAGAAGTTGTTCCGACTGCTGCTAACGTAGAATATTA
TGCACGAATCATAGCTGAAAAAGCACTGTTACGTCGTTTAATTCGAACGGCGACTCATATCGTGTCTGATGGATATGAGA
GAGAAGATGATGTGGATGGCCTTTTAAATGAGGCTGAGAAAAAAATATTAGAAGTATCTCATCAGACGAATGCGAAAGCA
TTTCAAAATATTAAAGACGTTCTTGTAGATGCTTACGATAAAATCGAACTTTTGCATAATCAAAAAGGTGAAGTTACTGG
GATACCAACTGGGTTTACTGAATTAGATAAGATGACGGCAGGGTTCCAGCGAAATGATTTAATCATCGTGGCGGCACGTC
CATCGGTAGGGAAAACGGCATTTTCATTAAATATCGCACAAAACGTAGCGACGAAAACAGATGAAAATGTAGCGATTTTT
AGTCTAGAGATGGGTGCTGATCAACTTGTTATGCGTATGCTATGTGCAGAAGGAAATATTGATGCGCAAAGACTTCGTAC
CGGGTCATTAACTTCTGATGATTGGGCGAAATTAACGATGGCAATGGGTAGCCTTTCTAATGCTGGAATCTATATTGATG
ATACGCCGGGGATTAAAGTAAATGAGATTCGAGCAAAATGTCGTAGATTAAAACAAGAACAGGGTCTTGGTATGATCTTG
ATTGACTACTTGCAGCTTATTCAAGGAAGTGGGAAATCAGGAGAGAACCGTCAGCAGGAAGTATCTGAGATTTCTCGTAC
ACTAAAAGGGATTGCGCGTGAATTACAAGTGCCTGTTATTGCCTTGTCACAGTTATCTCGTGGTGTAGAATCTCGTCAAG
ATAAACGTCCGATGATGTCTGATATTCGTGAATCGGGAAGTATCGAGCAGGATGCTGATATTGTAGCCTTTCTATATCGT
GAGGATTACTATGATCGAGAAACGGAAAATAAAAATACGATTGAAATTATTATTGCAAAGCAGCGTAATGGTCCAGTAGG
CTCAGTAGAGCTCGCATTCGTTAAGGAGTTCAATAAGTTCGTTAACTTAGAACGTCGCTTCGAAGATGGACATGCGCCAC
CGGCATAA

Upstream 100 bases:

>100_bases
ACTAGGCTATACAAATGTTACTGTGAAATTGCATCCGCAAGTAACAGCAACAGTAAAAGTTCATGTTAGTGAACAATAAA
AATACGTTAAGCAAGGAGGA

Downstream 100 bases:

>100_bases
AGATAGTATAAAAAAGAAACGCATTTCTTATAATAAGATGTGTTTCTTTTTTTTTATATAAAAGATAAGGCTTTCATAAT
GTAAAAATATAATTCTTACG

Product: replicative DNA helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 455; Mature: 455

Protein sequence:

>455_residues
MRMSDVMADRTPPHNIEAEQAVLGAILIDQDALTSASELLVPDSFYRTKHQKIFEVMLGLSDKGEPIDLVMMTSAMADQG
LLEEVGGVSYLAELAEVVPTAANVEYYARIIAEKALLRRLIRTATHIVSDGYEREDDVDGLLNEAEKKILEVSHQTNAKA
FQNIKDVLVDAYDKIELLHNQKGEVTGIPTGFTELDKMTAGFQRNDLIIVAARPSVGKTAFSLNIAQNVATKTDENVAIF
SLEMGADQLVMRMLCAEGNIDAQRLRTGSLTSDDWAKLTMAMGSLSNAGIYIDDTPGIKVNEIRAKCRRLKQEQGLGMIL
IDYLQLIQGSGKSGENRQQEVSEISRTLKGIARELQVPVIALSQLSRGVESRQDKRPMMSDIRESGSIEQDADIVAFLYR
EDYYDRETENKNTIEIIIAKQRNGPVGSVELAFVKEFNKFVNLERRFEDGHAPPA

Sequences:

>Translated_455_residues
MRMSDVMADRTPPHNIEAEQAVLGAILIDQDALTSASELLVPDSFYRTKHQKIFEVMLGLSDKGEPIDLVMMTSAMADQG
LLEEVGGVSYLAELAEVVPTAANVEYYARIIAEKALLRRLIRTATHIVSDGYEREDDVDGLLNEAEKKILEVSHQTNAKA
FQNIKDVLVDAYDKIELLHNQKGEVTGIPTGFTELDKMTAGFQRNDLIIVAARPSVGKTAFSLNIAQNVATKTDENVAIF
SLEMGADQLVMRMLCAEGNIDAQRLRTGSLTSDDWAKLTMAMGSLSNAGIYIDDTPGIKVNEIRAKCRRLKQEQGLGMIL
IDYLQLIQGSGKSGENRQQEVSEISRTLKGIARELQVPVIALSQLSRGVESRQDKRPMMSDIRESGSIEQDADIVAFLYR
EDYYDRETENKNTIEIIIAKQRNGPVGSVELAFVKEFNKFVNLERRFEDGHAPPA
>Mature_455_residues
MRMSDVMADRTPPHNIEAEQAVLGAILIDQDALTSASELLVPDSFYRTKHQKIFEVMLGLSDKGEPIDLVMMTSAMADQG
LLEEVGGVSYLAELAEVVPTAANVEYYARIIAEKALLRRLIRTATHIVSDGYEREDDVDGLLNEAEKKILEVSHQTNAKA
FQNIKDVLVDAYDKIELLHNQKGEVTGIPTGFTELDKMTAGFQRNDLIIVAARPSVGKTAFSLNIAQNVATKTDENVAIF
SLEMGADQLVMRMLCAEGNIDAQRLRTGSLTSDDWAKLTMAMGSLSNAGIYIDDTPGIKVNEIRAKCRRLKQEQGLGMIL
IDYLQLIQGSGKSGENRQQEVSEISRTLKGIARELQVPVIALSQLSRGVESRQDKRPMMSDIRESGSIEQDADIVAFLYR
EDYYDRETENKNTIEIIIAKQRNGPVGSVELAFVKEFNKFVNLERRFEDGHAPPA

Specific function: Participates In Initiation And Elongation During Chromosome Replication; It Exhibits DNA-Dependent ATPase Activity And Contains Distinct Active Sites For ATP Binding, DNA Binding, And Interaction With DNAc Protein, Primase, And Other Prepriming Proteins.

COG id: COG0305

COG function: function code L; Replicative DNA helicase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SF4 helicase domain [H]

Homologues:

Organism=Escherichia coli, GI1790486, Length=439, Percent_Identity=45.3302961275626, Blast_Score=389, Evalue=1e-109,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR007692
- InterPro:   IPR007694
- InterPro:   IPR007693
- InterPro:   IPR016136 [H]

Pfam domain/function: PF00772 DnaB; PF03796 DnaB_C [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 50483; Mature: 50483

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMSDVMADRTPPHNIEAEQAVLGAILIDQDALTSASELLVPDSFYRTKHQKIFEVMLGL
CCCHHHHHCCCCCCCCCHHHHHHHHHEECCHHHCCHHHHCCCCHHHHHHHHHHHHHHHCC
SDKGEPIDLVMMTSAMADQGLLEEVGGVSYLAELAEVVPTAANVEYYARIIAEKALLRRL
CCCCCCEEEEEEHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
IRTATHIVSDGYEREDDVDGLLNEAEKKILEVSHQTNAKAFQNIKDVLVDAYDKIELLHN
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC
QKGEVTGIPTGFTELDKMTAGFQRNDLIIVAARPSVGKTAFSLNIAQNVATKTDENVAIF
CCCCEECCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEHHHHHHCCCCCCEEEE
SLEMGADQLVMRMLCAEGNIDAQRLRTGSLTSDDWAKLTMAMGSLSNAGIYIDDTPGIKV
EEECCHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCH
NEIRAKCRRLKQEQGLGMILIDYLQLIQGSGKSGENRQQEVSEISRTLKGIARELQVPVI
HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHH
ALSQLSRGVESRQDKRPMMSDIRESGSIEQDADIVAFLYREDYYDRETENKNTIEIIIAK
HHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEE
QRNGPVGSVELAFVKEFNKFVNLERRFEDGHAPPA
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRMSDVMADRTPPHNIEAEQAVLGAILIDQDALTSASELLVPDSFYRTKHQKIFEVMLGL
CCCHHHHHCCCCCCCCCHHHHHHHHHEECCHHHCCHHHHCCCCHHHHHHHHHHHHHHHCC
SDKGEPIDLVMMTSAMADQGLLEEVGGVSYLAELAEVVPTAANVEYYARIIAEKALLRRL
CCCCCCEEEEEEHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
IRTATHIVSDGYEREDDVDGLLNEAEKKILEVSHQTNAKAFQNIKDVLVDAYDKIELLHN
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC
QKGEVTGIPTGFTELDKMTAGFQRNDLIIVAARPSVGKTAFSLNIAQNVATKTDENVAIF
CCCCEECCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEHHHHHHCCCCCCEEEE
SLEMGADQLVMRMLCAEGNIDAQRLRTGSLTSDDWAKLTMAMGSLSNAGIYIDDTPGIKV
EEECCHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCH
NEIRAKCRRLKQEQGLGMILIDYLQLIQGSGKSGENRQQEVSEISRTLKGIARELQVPVI
HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHH
ALSQLSRGVESRQDKRPMMSDIRESGSIEQDADIVAFLYREDYYDRETENKNTIEIIIAK
HHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEE
QRNGPVGSVELAFVKEFNKFVNLERRFEDGHAPPA
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377; 1312531 [H]