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The map label for this gene is yycH [H]

Identifier: 118480492

GI number: 118480492

Start: 5232202

End: 5233524

Strand: Reverse

Name: yycH [H]

Synonym: BALH_4971

Alternate gene names: 118480492

Gene position: 5233524-5232202 (Counterclockwise)

Preceding gene: 118480493

Following gene: 118480491

Centisome position: 99.55

GC content: 33.26

Gene sequence:

>1323_bases
TTGGGAATGAGTATGGAAAATGTTAAAACGATAGTTTTAATTAATTTAGTTGTAATTAGTCTATTTCTTACTTTTAACTT
ATGGACGTATGTGCCAGATTCCACATCTATGCAAAATGCAAAATTTGTACAGGGGAATGAAGGGGCTACGCAAACTAAAA
TCGCTGATGTTGTCCGCCCTACTTCTATCATCGTGCATAAAGATAAAAATCATTATGGGAGCAAAAGAGAGGGAGATATA
GAATCAATCTATAAACCTTTGGAGGCAGGGGAATTACATGATTTCAAAGAGATATCGATTGCTAAGGCTGACTTCCTTTC
TTATGTGCATGGTGAAGGGAAAATTGAACTTATTTTCCCTACCAACATCCCATTTGATGCGGTTAAATCTATGTTTAATA
TGAAAGAAAAAAGTATAAATAAGCCTAAATATTTTAATCGAATTATTCTTGATCCTTCTAGGAGTAGGGATCAGGAAATT
AAAATTAATTTTGTTTCTGATGGTGATAACTCTAGAATATATGAGGCAAAATTAAGTGGTGTATATTTAAAAGATATTGT
AAATGCACAAAATCAATTTGTAGTATCGGCAAAACCTTATTTTGACTATCAAATTAATGATATGAAAAAGCTATATTTAC
CAGATGGAACGACAGAATTAAGTAATATAACATATATTTCGTCTAATTTAGCGGTTGATACATTTAAGAATGCTCTTTTT
AGTGACCCACGTTATTTAAGCCCGATTAACGAGCAATCGAAAGAAACATTTACAGATGGTATTAGGTCTATGGAGATTGA
AAACGATCATCATATGCTAAAGTATAAAAATTCTTCTGTTTCAAGTGAGAAAACGACAGATAATTTAATGCTTTTACAAA
AAAGCTTTGATTTTGTAAATGGTCACAGTGGAAGTCTGGATTCGTATCGCTTGGACTATATGAATAAAGGACAGACAGTA
TTCCGTTTACATGAAGATGGATATTCCGTATTCAACACAGATGGATTAGCTGAATTGAGACAAATATGGGGATCAGAAGA
AGTAATGGAGTATGAAAGACCATTGTTGTCTTTAAATACGAAAGGTATAGAACAGAAGGTTACTCTTCCATCAGGGCATG
TTGTGATAGCATCCTTAGAAAATAATGCCGCTGTAGATAAAAGATTGATAAAAGATATTGGTATTGGATACAAATTATCA
CTAGATGGGCAAGTAGCTCGACTACATCCGATTTGGTATGTAAAGTTTGTTGAAGATGAAGCTGGAAAGCAAAAAATATA
TGAGTGGAGTGAGGGAGGACTAAATGGATTGGGATCGGATTAA

Upstream 100 bases:

>100_bases
TGATTGAGGCACATGGTGGCTCGATTTGGGCGAAGAGTGAAGAAGGAAAAGGGACAACAATTTATTTCACATTGCCAATG
GCAGCGGATGAAGAGGACGA

Downstream 100 bases:

>100_bases
AACCATATTTATTGTGACCTTTTTTGTTTTGGATCTCTTTCTCATCTTTCAATTCATTCAAAAGCAAGATAGTAATCAAT
TGGAGCTTATTGCAGAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 439

Protein sequence:

>440_residues
MGMSMENVKTIVLINLVVISLFLTFNLWTYVPDSTSMQNAKFVQGNEGATQTKIADVVRPTSIIVHKDKNHYGSKREGDI
ESIYKPLEAGELHDFKEISIAKADFLSYVHGEGKIELIFPTNIPFDAVKSMFNMKEKSINKPKYFNRIILDPSRSRDQEI
KINFVSDGDNSRIYEAKLSGVYLKDIVNAQNQFVVSAKPYFDYQINDMKKLYLPDGTTELSNITYISSNLAVDTFKNALF
SDPRYLSPINEQSKETFTDGIRSMEIENDHHMLKYKNSSVSSEKTTDNLMLLQKSFDFVNGHSGSLDSYRLDYMNKGQTV
FRLHEDGYSVFNTDGLAELRQIWGSEEVMEYERPLLSLNTKGIEQKVTLPSGHVVIASLENNAAVDKRLIKDIGIGYKLS
LDGQVARLHPIWYVKFVEDEAGKQKIYEWSEGGLNGLGSD

Sequences:

>Translated_440_residues
MGMSMENVKTIVLINLVVISLFLTFNLWTYVPDSTSMQNAKFVQGNEGATQTKIADVVRPTSIIVHKDKNHYGSKREGDI
ESIYKPLEAGELHDFKEISIAKADFLSYVHGEGKIELIFPTNIPFDAVKSMFNMKEKSINKPKYFNRIILDPSRSRDQEI
KINFVSDGDNSRIYEAKLSGVYLKDIVNAQNQFVVSAKPYFDYQINDMKKLYLPDGTTELSNITYISSNLAVDTFKNALF
SDPRYLSPINEQSKETFTDGIRSMEIENDHHMLKYKNSSVSSEKTTDNLMLLQKSFDFVNGHSGSLDSYRLDYMNKGQTV
FRLHEDGYSVFNTDGLAELRQIWGSEEVMEYERPLLSLNTKGIEQKVTLPSGHVVIASLENNAAVDKRLIKDIGIGYKLS
LDGQVARLHPIWYVKFVEDEAGKQKIYEWSEGGLNGLGSD
>Mature_439_residues
GMSMENVKTIVLINLVVISLFLTFNLWTYVPDSTSMQNAKFVQGNEGATQTKIADVVRPTSIIVHKDKNHYGSKREGDIE
SIYKPLEAGELHDFKEISIAKADFLSYVHGEGKIELIFPTNIPFDAVKSMFNMKEKSINKPKYFNRIILDPSRSRDQEIK
INFVSDGDNSRIYEAKLSGVYLKDIVNAQNQFVVSAKPYFDYQINDMKKLYLPDGTTELSNITYISSNLAVDTFKNALFS
DPRYLSPINEQSKETFTDGIRSMEIENDHHMLKYKNSSVSSEKTTDNLMLLQKSFDFVNGHSGSLDSYRLDYMNKGQTVF
RLHEDGYSVFNTDGLAELRQIWGSEEVMEYERPLLSLNTKGIEQKVTLPSGHVVIASLENNAAVDKRLIKDIGIGYKLSL
DGQVARLHPIWYVKFVEDEAGKQKIYEWSEGGLNGLGSD

Specific function: Together with yycI, regulates the activity of the two- component system yycF/yycG [H]

COG id: COG4863

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009996 [H]

Pfam domain/function: PF07435 YycH [H]

EC number: NA

Molecular weight: Translated: 49910; Mature: 49779

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGMSMENVKTIVLINLVVISLFLTFNLWTYVPDSTSMQNAKFVQGNEGATQTKIADVVRP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEECCCCCCHHHHHHHHCC
TSIIVHKDKNHYGSKREGDIESIYKPLEAGELHDFKEISIAKADFLSYVHGEGKIELIFP
CEEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEC
TNIPFDAVKSMFNMKEKSINKPKYFNRIILDPSRSRDQEIKINFVSDGDNSRIYEAKLSG
CCCCHHHHHHHHHHHHHCCCCCHHHCEEEECCCCCCCCEEEEEEEECCCCCEEEEEEECC
VYLKDIVNAQNQFVVSAKPYFDYQINDMKKLYLPDGTTELSNITYISSNLAVDTFKNALF
EEHHHHHCCCCCEEEEECCCCCEEECCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHH
SDPRYLSPINEQSKETFTDGIRSMEIENDHHMLKYKNSSVSSEKTTDNLMLLQKSFDFVN
CCCCCCCCCCHHHHHHHHHCHHEEEECCCCEEEEECCCCCCCCCCCCCEEEEEHHCCCCC
GHSGSLDSYRLDYMNKGQTVFRLHEDGYSVFNTDGLAELRQIWGSEEVMEYERPLLSLNT
CCCCCCCCEEECCCCCCCEEEEEECCCCEEECCCCHHHHHHHHCCHHHHHHHCCEEECCC
KGIEQKVTLPSGHVVIASLENNAAVDKRLIKDIGIGYKLSLDGQVARLHPIWYVKFVEDE
CCCCEEEECCCCCEEEEECCCCHHHHHHHHHHHCCCEEEECCCCEEEEEEEEEEEEECCC
AGKQKIYEWSEGGLNGLGSD
CCHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
GMSMENVKTIVLINLVVISLFLTFNLWTYVPDSTSMQNAKFVQGNEGATQTKIADVVRP
CCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEECCCCCCHHHHHHHHCC
TSIIVHKDKNHYGSKREGDIESIYKPLEAGELHDFKEISIAKADFLSYVHGEGKIELIFP
CEEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEC
TNIPFDAVKSMFNMKEKSINKPKYFNRIILDPSRSRDQEIKINFVSDGDNSRIYEAKLSG
CCCCHHHHHHHHHHHHHCCCCCHHHCEEEECCCCCCCCEEEEEEEECCCCCEEEEEEECC
VYLKDIVNAQNQFVVSAKPYFDYQINDMKKLYLPDGTTELSNITYISSNLAVDTFKNALF
EEHHHHHCCCCCEEEEECCCCCEEECCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHH
SDPRYLSPINEQSKETFTDGIRSMEIENDHHMLKYKNSSVSSEKTTDNLMLLQKSFDFVN
CCCCCCCCCCHHHHHHHHHCHHEEEECCCCEEEEECCCCCCCCCCCCCEEEEEHHCCCCC
GHSGSLDSYRLDYMNKGQTVFRLHEDGYSVFNTDGLAELRQIWGSEEVMEYERPLLSLNT
CCCCCCCCEEECCCCCCCEEEEEECCCCEEECCCCHHHHHHHHCCHHHHHHHCCEEECCC
KGIEQKVTLPSGHVVIASLENNAAVDKRLIKDIGIGYKLSLDGQVARLHPIWYVKFVEDE
CCCCEEEECCCCCEEEEECCCCHHHHHHHHHHHCCCEEEECCCCEEEEEEEEEEEEECCC
AGKQKIYEWSEGGLNGLGSD
CCHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]