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The map label for this gene is yqfA [C]

Identifier: 118480480

GI number: 118480480

Start: 5220275

End: 5220937

Strand: Reverse

Name: yqfA [C]

Synonym: BALH_4959

Alternate gene names: 118480480

Gene position: 5220937-5220275 (Counterclockwise)

Preceding gene: 118480482

Following gene: 118480479

Centisome position: 99.31

GC content: 33.94

Gene sequence:

>663_bases
ATGAGGGGTGTTTATATGAATACTTACATAAGAGAACCGGTTAATGCTTTTACCCATTTGGGAGGAGCTGTATTATCATT
TATTGCATTACTAGCTATGCTTGTAAAAGTTTCTATTAAGATGCCATCTTTTGCGGCAATTACAGCTATTATTTTGTTTG
GTATCGGAATGATGGTTCTGTATACAGCATCAGCTGTATATCATAGTGTTGTAGCTAGTGAACGTGTTATTTATTTCTTT
AGGAAGCTTGATCACTCTATGATTTTTATATTGATTGCAGGTACATATGCACCATTTTGTTTAATTACATTACATTCCGC
AAACGGTTTATTATTATTTTGTTTAGTTTACGCAACTGCCATTTGTGGTATTGTTTTTAAAATGTTTTGGTTTAATTGTC
CGAGATGGTTATCAACAGCAATTTATATTACAATGGGCTGGTTAATTGTTCTGTTCTTTGCACCGTTAGCCGCTAACTTA
AGTACAGGAGGTATGGTGCTCCTAGTACTTGGAGGCATTCTTTATACAATTGGTGGATTTATTTACGGAACAAAGCCAAA
GTGGTTAGAGTTTAAACATATGGGACATCATGAAATTTTTCACGTTTTCGTGTTATTGGGAAGCCTAGCTCACTTTTTAA
GTGTATATTGCTATGTAATTTAA

Upstream 100 bases:

>100_bases
CTCTAAATATGGTATTACGAAACAAATGAATTGTAAATGTTGACCTCTAATATTAATAAGTATATAATTACATGTAGTTA
TTAAAACTACATGTAATTAT

Downstream 100 bases:

>100_bases
CAATATAAAATTTCCGATTAATTTTTATTTTTCTTGATTAATAAAAAAAGATATAGACACATATGTATGTTGAAGAGTTG
CATAACGTAAAGGTTATGTG

Product: hemolysin III

Products: NA

Alternate protein names: Hemolysin III; Hly-III [H]

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MRGVYMNTYIREPVNAFTHLGGAVLSFIALLAMLVKVSIKMPSFAAITAIILFGIGMMVLYTASAVYHSVVASERVIYFF
RKLDHSMIFILIAGTYAPFCLITLHSANGLLLFCLVYATAICGIVFKMFWFNCPRWLSTAIYITMGWLIVLFFAPLAANL
STGGMVLLVLGGILYTIGGFIYGTKPKWLEFKHMGHHEIFHVFVLLGSLAHFLSVYCYVI

Sequences:

>Translated_220_residues
MRGVYMNTYIREPVNAFTHLGGAVLSFIALLAMLVKVSIKMPSFAAITAIILFGIGMMVLYTASAVYHSVVASERVIYFF
RKLDHSMIFILIAGTYAPFCLITLHSANGLLLFCLVYATAICGIVFKMFWFNCPRWLSTAIYITMGWLIVLFFAPLAANL
STGGMVLLVLGGILYTIGGFIYGTKPKWLEFKHMGHHEIFHVFVLLGSLAHFLSVYCYVI
>Mature_220_residues
MRGVYMNTYIREPVNAFTHLGGAVLSFIALLAMLVKVSIKMPSFAAITAIILFGIGMMVLYTASAVYHSVVASERVIYFF
RKLDHSMIFILIAGTYAPFCLITLHSANGLLLFCLVYATAICGIVFKMFWFNCPRWLSTAIYITMGWLIVLFFAPLAANL
STGGMVLLVLGGILYTIGGFIYGTKPKWLEFKHMGHHEIFHVFVLLGSLAHFLSVYCYVI

Specific function: Unknown

COG id: COG1272

COG function: function code R; Predicted membrane protein, hemolysin III homolog

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0073 (Hly-III) family [H]

Homologues:

Organism=Escherichia coli, GI1789266, Length=209, Percent_Identity=34.9282296650718, Blast_Score=114, Evalue=4e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004254
- InterPro:   IPR005744 [H]

Pfam domain/function: PF03006 HlyIII [H]

EC number: NA

Molecular weight: Translated: 24535; Mature: 24535

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: PS00024 HEMOPEXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGVYMNTYIREPVNAFTHLGGAVLSFIALLAMLVKVSIKMPSFAAITAIILFGIGMMVL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
YTASAVYHSVVASERVIYFFRKLDHSMIFILIAGTYAPFCLITLHSANGLLLFCLVYATA
HHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHH
ICGIVFKMFWFNCPRWLSTAIYITMGWLIVLFFAPLAANLSTGGMVLLVLGGILYTIGGF
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
IYGTKPKWLEFKHMGHHEIFHVFVLLGSLAHFLSVYCYVI
HCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRGVYMNTYIREPVNAFTHLGGAVLSFIALLAMLVKVSIKMPSFAAITAIILFGIGMMVL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
YTASAVYHSVVASERVIYFFRKLDHSMIFILIAGTYAPFCLITLHSANGLLLFCLVYATA
HHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHH
ICGIVFKMFWFNCPRWLSTAIYITMGWLIVLFFAPLAANLSTGGMVLLVLGGILYTIGGF
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
IYGTKPKWLEFKHMGHHEIFHVFVLLGSLAHFLSVYCYVI
HCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7495855 [H]