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The map label for this gene is nsr [H]

Identifier: 118480440

GI number: 118480440

Start: 5172501

End: 5173172

Strand: Direct

Name: nsr [H]

Synonym: BALH_4909

Alternate gene names: 118480440

Gene position: 5172501-5173172 (Clockwise)

Preceding gene: 118480435

Following gene: 118480444

Centisome position: 98.39

GC content: 35.27

Gene sequence:

>672_bases
ATGAAAATCAGCAAAAATAGCGAAGAAATCTCTCATTACATACAAACTTACAACTTCCATACTTTCTTTTCTTTTGACAT
CTTACCGTATGCTGAACTACATTCCTTCCAAAAGAAAGAAAGGATATGTAGGGAAGGCGTTGACGTTCCTTATCTTTATT
ATTTAATTTCCGGGAAGGCGAAAATATATATGAGTCACAAAAACGGGAGGGTCTCCTTAATTAACTTTATCCAAGCACCT
TCGTTCATTGGAGAATTAGGGTTAATCGGGGTGGAATCTGTTACAAAAACGGTAGAAGTGATTGAAGAATGTATGTGCTT
GGTGCTTCCTCTTAAAGATTGTCGGCATCTTTTGTTGCAAGATGCTACCTTTCTACAGAAACTATGCAAATTTATCGGCG
AAAAAACAATTACCCGAACAGAAAGTTACGCCAAAAATAATAGTTATCCGTTCGAAAACCGCTTAGCGGCATTTATTCTA
TTAACAGAACAAAATAACAGTTATACAGAAAAACATACCGAGGCTTCGGAATACTTAAATGTTAGCTACCGTCATCTTTT
ATATGTATTAAACCAGTTTTGCCAACAACATTATTTAAAAAAAGACGGCAGAACCTATTACATACACGACCGAATTCAAT
TGGAAAAACTAGCTGACGAACTGAAAATATAA

Upstream 100 bases:

>100_bases
CTCACACTCTCTTTTCTACAAAAACAAATTTACGTAAATCGTATCATTCTTTCTTGTAAAAATAATAGGAGATATCTCAT
ACTAAGTATGAGGTGAAAAT

Downstream 100 bases:

>100_bases
CAAAGTAGCATTAACGTTTATCTGTTAATGCTACTTTTTTCGAGTGACGATTCTATTTTCAATTAAAATTTACTTGCTAC
TTTAGCTGCTTCTTCAAGAC

Product: DNA-binding transcriptional activator YeiL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MKISKNSEEISHYIQTYNFHTFFSFDILPYAELHSFQKKERICREGVDVPYLYYLISGKAKIYMSHKNGRVSLINFIQAP
SFIGELGLIGVESVTKTVEVIEECMCLVLPLKDCRHLLLQDATFLQKLCKFIGEKTITRTESYAKNNSYPFENRLAAFIL
LTEQNNSYTEKHTEASEYLNVSYRHLLYVLNQFCQQHYLKKDGRTYYIHDRIQLEKLADELKI

Sequences:

>Translated_223_residues
MKISKNSEEISHYIQTYNFHTFFSFDILPYAELHSFQKKERICREGVDVPYLYYLISGKAKIYMSHKNGRVSLINFIQAP
SFIGELGLIGVESVTKTVEVIEECMCLVLPLKDCRHLLLQDATFLQKLCKFIGEKTITRTESYAKNNSYPFENRLAAFIL
LTEQNNSYTEKHTEASEYLNVSYRHLLYVLNQFCQQHYLKKDGRTYYIHDRIQLEKLADELKI
>Mature_223_residues
MKISKNSEEISHYIQTYNFHTFFSFDILPYAELHSFQKKERICREGVDVPYLYYLISGKAKIYMSHKNGRVSLINFIQAP
SFIGELGLIGVESVTKTVEVIEECMCLVLPLKDCRHLLLQDATFLQKLCKFIGEKTITRTESYAKNNSYPFENRLAAFIL
LTEQNNSYTEKHTEASEYLNVSYRHLLYVLNQFCQQHYLKKDGRTYYIHDRIQLEKLADELKI

Specific function: Transcription regulator involved in mid-term, stationary-phase viability under nitrogen starvation. Might control expression of the salvage pathways or in some other way repress the recycling of nucleobases to nucleic acids and enhance their use as genera

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH crp-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788487, Length=203, Percent_Identity=46.7980295566502, Blast_Score=180, Evalue=7e-47,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018490
- InterPro:   IPR000595
- InterPro:   IPR012318
- InterPro:   IPR014710 [H]

Pfam domain/function: PF00027 cNMP_binding [H]

EC number: NA

Molecular weight: Translated: 26222; Mature: 26222

Theoretical pI: Translated: 7.86; Mature: 7.86

Prosite motif: PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISKNSEEISHYIQTYNFHTFFSFDILPYAELHSFQKKERICREGVDVPYLYYLISGKA
CCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCE
KIYMSHKNGRVSLINFIQAPSFIGELGLIGVESVTKTVEVIEECMCLVLPLKDCRHLLLQ
EEEEECCCCCCHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
DATFLQKLCKFIGEKTITRTESYAKNNSYPFENRLAAFILLTEQNNSYTEKHTEASEYLN
HHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHCEEEEEEEECCCCCCHHHHHHHHHHHH
VSYRHLLYVLNQFCQQHYLKKDGRTYYIHDRIQLEKLADELKI
HHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHCC
>Mature Secondary Structure
MKISKNSEEISHYIQTYNFHTFFSFDILPYAELHSFQKKERICREGVDVPYLYYLISGKA
CCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCE
KIYMSHKNGRVSLINFIQAPSFIGELGLIGVESVTKTVEVIEECMCLVLPLKDCRHLLLQ
EEEEECCCCCCHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
DATFLQKLCKFIGEKTITRTESYAKNNSYPFENRLAAFILLTEQNNSYTEKHTEASEYLN
HHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHCEEEEEEEECCCCCCHHHHHHHHHHHH
VSYRHLLYVLNQFCQQHYLKKDGRTYYIHDRIQLEKLADELKI
HHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]